Os02g0797700

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Revision as of 02:58, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0797700| Description = Nonaspanin (TM9SF) family protein| Version = NM_001054934.1 GI:115449238 GeneID:4331019| Length = 2411 bp| Definiti...")
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Gene Name

Os02g0797700

Description

Nonaspanin (TM9SF) family protein

Version

NM_001054934.1 GI:115449238 GeneID:4331019

Length

2411 bp

Definition

Oryza sativa Japonica Group Os02g0797700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34844200..34846610

Sequence Coding Region

34844406..34846403

Expression

GEO Profiles:Os02g0797700

Genome Context

<gbrowseImage1> name=NC_008395:34844200..34846610 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34844200..34846610 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcgcctcctccccttcctcgtcgcggcggcggcggcgttggtggcggtgtccctctccgcgccaggcgccgacgggttctacctcccggggagctacccgcacaagtacaaccccggcgagccgctgagcgtgaaggtgaactccctcacctccatcgacaccgagatcccctacagctactacagcctcccgttctgcacccctcccgacggcgtcaaggacagcgccgagaacctcggcgagctcctcatgggcgaccgcatcgagaactccccctaccgcttccggatgcacgccaacgactccgacctcttcctctgccgctccccgccgctcgccgccgacgccttcaacctccttaagaagcggatcgacgagatgtaccaggttaacctcatcctcgacaacctccccgccatccgctacaccaagaaggacgactacttcctccgatggaccggctaccccgtcggcatccgcgtcggcgtcgactactacgtcttcaaccacctccagttcaccgtcctcgtgcacaagtacgaggaggccaatgtcgcccgtgtcatgggcaccggcgacgccaccgacggcttcccttccaccggcaaggacggcagcggcggcgccgccgggtcatccggctggatggttgtcggcttcgaggtcgtgccttgtagcatcaagcacaaccccgacgacgtcaagtcgctcaagatgtatggcaagtacccgaggagcatcaagtgcgacccgaccaccgtgtccatgagcatcaaggagaacgagcccatcgtgtacacctacgaggtgtcgttcgtcgagagcgatatcaagtggccctcgaggtgggacgcatacctcaagatggagggtgccaaggtgcactggttctcgatcctcaactcgctcatggtgattgctttccttgctggtatcgtgtttgtcatattactgaggaccgtgaggcgtgatctgacgaggtatgaggagcttgacagtgaagcgcaggcgcagatgaacgaggagctgtctgggtggaagcttgttgtcagtgatgttttccgcgcgccaagcaacccaatgttgctctgcgttatggtcggggatggtgttcagatccttgggatggcagtggtgaccattctgtttgcggcgcttgggttcatgtcaccagcttcccgcggtactctgatcacgggcatgctgttcttctatctggttcttggaattttggcaggatatgtgggtgttcgtgtgtggaagacaatcaagtgcggtgatcatacagggtggatggctgtttcatggagggtagcttgcttcttccccggcattgcattcctgatccttaccactctgaacttcctgttgtggggaagccaaagcacaggagccatccccttctcgttgtttgtcatattgattctgctctggttctgtatctctgtgccgcttacacttgtaggtggactcctcggtgccaaggcaccgcacattgagtaccccgtgcgcactaaccagatccctcgtgaaatcccacctcagaagtacccatcctggttgctggttctcggcgctggcacactgccctttggtaccctgttcatcgagctcttcttcatcatgtctagcatatggatggggcgtgtgtactatgtctttggattcctcttcatcgtcctgttgctccttgttattgtctgcgctgaggtttcccttgttctgacctacatgcatctctgtgtcgaggattggaaatggtggtggaaatcattcttctcatctggatctgtggcgatctacattttcttgtactcgatcaactatcttgtttttgacctaaagagcttgagtggacctgtgtcggcgaccctctatctcggctactcactcttcatggttattgctattatgctggctactggaacagtgggattcatttcatcattctgcttcgtccactatcttttctcatccgtgaaagcagattaa</cdnaseq>

Protein Sequence

<aaseq>MARLLPFLVAAAAALVAVSLSAPGADGFYLPGSYPHKYNPGEPL SVKVNSLTSIDTEIPYSYYSLPFCTPPDGVKDSAENLGELLMGDRIENSPYRFRMHAN DSDLFLCRSPPLAADAFNLLKKRIDEMYQVNLILDNLPAIRYTKKDDYFLRWTGYPVG IRVGVDYYVFNHLQFTVLVHKYEEANVARVMGTGDATDGFPSTGKDGSGGAAGSSGWM VVGFEVVPCSIKHNPDDVKSLKMYGKYPRSIKCDPTTVSMSIKENEPIVYTYEVSFVE SDIKWPSRWDAYLKMEGAKVHWFSILNSLMVIAFLAGIVFVILLRTVRRDLTRYEELD SEAQAQMNEELSGWKLVVSDVFRAPSNPMLLCVMVGDGVQILGMAVVTILFAALGFMS PASRGTLITGMLFFYLVLGILAGYVGVRVWKTIKCGDHTGWMAVSWRVACFFPGIAFL ILTTLNFLLWGSQSTGAIPFSLFVILILLWFCISVPLTLVGGLLGAKAPHIEYPVRTN QIPREIPPQKYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGRVYYVFGFLFIVLLLL VIVCAEVSLVLTYMHLCVEDWKWWWKSFFSSGSVAIYIFLYSINYLVFDLKSLSGPVS ATLYLGYSLFMVIAIMLATGTVGFISSFCFVHYLFSSVKAD</aaseq>

Gene Sequence

<dnaseqindica>208..2205#acccccccattccgccgcccccacccccagatctactccaccgccaccgccaccgacacccccgtctccggcgagtccccccgccgcctcctcgccggagaacccgcctcccctcccccaaccctaaagcctccccgtctcattcgcccccccaccggatccagatcaaaaccacacgccgatccagatcccgccgggcgcccagccatggcgcgcctcctccccttcctcgtcgcggcggcggcggcgttggtggcggtgtccctctccgcgccaggcgccgacgggttctacctcccggggagctacccgcacaagtacaaccccggcgagccgctgagcgtgaaggtgaactccctcacctccatcgacaccgagatcccctacagctactacagcctcccgttctgcacccctcccgacggcgtcaaggacagcgccgagaacctcggcgagctcctcatgggcgaccgcatcgagaactccccctaccgcttccggatgcacgccaacgactccgacctcttcctctgccgctccccgccgctcgccgccgacgccttcaacctccttaagaagcggatcgacgagatgtaccaggttaacctcatcctcgacaacctccccgccatccgctacaccaagaaggacgactacttcctccgatggaccggctaccccgtcggcatccgcgtcggcgtcgactactacgtcttcaaccacctccagttcaccgtcctcgtgcacaagtacgaggaggccaatgtcgcccgtgtcatgggcaccggcgacgccaccgacggcttcccttccaccggcaaggacggcagcggcggcgccgccgggtcatccggctggatggttgtcggcttcgaggtcgtgccttgtagcatcaagcacaaccccgacgacgtcaagtcgctcaagatgtatggcaagtacccgaggagcatcaagtgcgacccgaccaccgtgtccatgagcatcaaggagaacgagcccatcgtgtacacctacgaggtgtcgttcgtcgagagcgatatcaagtggccctcgaggtgggacgcatacctcaagatggagggtgccaaggtgcactggttctcgatcctcaactcgctcatggtgattgctttccttgctggtatcgtgtttgtcatattactgaggaccgtgaggcgtgatctgacgaggtatgaggagcttgacagtgaagcgcaggcgcagatgaacgaggagctgtctgggtggaagcttgttgtcagtgatgttttccgcgcgccaagcaacccaatgttgctctgcgttatggtcggggatggtgttcagatccttgggatggcagtggtgaccattctgtttgcggcgcttgggttcatgtcaccagcttcccgcggtactctgatcacgggcatgctgttcttctatctggttcttggaattttggcaggatatgtgggtgttcgtgtgtggaagacaatcaagtgcggtgatcatacagggtggatggctgtttcatggagggtagcttgcttcttccccggcattgcattcctgatccttaccactctgaacttcctgttgtggggaagccaaagcacaggagccatccccttctcgttgtttgtcatattgattctgctctggttctgtatctctgtgccgcttacacttgtaggtggactcctcggtgccaaggcaccgcacattgagtaccccgtgcgcactaaccagatccctcgtgaaatcccacctcagaagtacccatcctggttgctggttctcggcgctggcacactgccctttggtaccctgttcatcgagctcttcttcatcatgtctagcatatggatggggcgtgtgtactatgtctttggattcctcttcatcgtcctgttgctccttgttattgtctgcgctgaggtttcccttgttctgacctacatgcatctctgtgtcgaggattggaaatggtggtggaaatcattcttctcatctggatctgtggcgatctacattttcttgtactcgatcaactatcttgtttttgacctaaagagcttgagtggacctgtgtcggcgaccctctatctcggctactcactcttcatggttattgctattatgctggctactggaacagtgggattcatttcatcattctgcttcgtccactatcttttctcatccgtgaaagcagattaagctcatcccgatgcagagtgtattactcaaatgagaggtgagaatagtggacatcaaaaagtttgtagtcacaaaatcttagctcatgtcatcttttggtatacaaagactgaataactattgtaagctttactaggatttatcaatgggttttatggagagatgtgctagcagcttgcacgatgtaatagaatgaattggtttat</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0797700, RefSeq:Os02g0797700