Os02g0799000

From RiceWiki
Revision as of 02:58, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0799000| Description = Similar to DNA-binding protein phosphatase 2C| Version = NM_001054942.1 GI:115449254 GeneID:4331028| Length = 4009 b...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0799000

Description

Similar to DNA-binding protein phosphatase 2C

Version

NM_001054942.1 GI:115449254 GeneID:4331028

Length

4009 bp

Definition

Oryza sativa Japonica Group Os02g0799000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34913135..34917143

Sequence Coding Region

34913367..34913450,34915216..34915416,34915680..34915891,34916214..34916781

Expression

GEO Profiles:Os02g0799000

Genome Context

<gbrowseImage1> name=NC_008395:34913135..34917143 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34913135..34917143 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgcgtggaggaactcgaaggcgcagagaggctcgattttggtggggttgcggagctcgagacaacaccggcagacttcgagatggagaaagtttgtgagaacacagtatctcttgatttcaagcaggctaggtcgagcagttttgtcccagttatccgatcaggggactggtcggatattggaggtcgcgattacatggaagatgctcatgtctgcatctcagatctagctaataattttggtcataattcagtggatgatgagattatttccttttatggggtctttgatgggcatggtggaaaagatgcagctcattatgtgcgtgataacttgccacgggttatcgtggaagatgctgattttcctcttgagctagagaaagttgtcaggaggtcatttgtgcaaactgatagtcaatttgcagagaggtgctctcatcagaatgcactttcttctggaacgacagcgcttacagcaatgatttttggaaggtctcttctggttgctaatgctggtgattgccgagcagttctttcaaggcgtggtaccgcaattgaaatgtccaaggaccacaggacttgctgcctcaacgaaagaaagcgtatagaatcacttggcggctatgttgatgatggctatttgaatggtcaattagcagtcactagagcattgggtgactggcatctcgagggtctgaaagaagtgggtgagccaggtggccccttgagcgcggaaccagagctcaagatgatcacactgacgaaggaagacgagttcttgataataggaagcgacggcatctgggacttcttctcgaaccagaatgccgtggatttcaccaggaagaggctccaagagcacaatgacttgaggttgtgctgcaagcagatcgtcgaggaggcaataaggcgaggggcctcagacaacctaacggcggtgatggtctcattccaccaggaggcccctcctcagctcagagtgaacaggacggggagggtcgagcggagcatatcggctgaagggcttcacagcctcagggtgctcctggaaggccaatga</cdnaseq>

Protein Sequence

<aaseq>MCVEELEGAERLDFGGVAELETTPADFEMEKVCENTVSLDFKQA RSSSFVPVIRSGDWSDIGGRDYMEDAHVCISDLANNFGHNSVDDEIISFYGVFDGHGG KDAAHYVRDNLPRVIVEDADFPLELEKVVRRSFVQTDSQFAERCSHQNALSSGTTALT AMIFGRSLLVANAGDCRAVLSRRGTAIEMSKDHRTCCLNERKRIESLGGYVDDGYLNG QLAVTRALGDWHLEGLKEVGEPGGPLSAEPELKMITLTKEDEFLIIGSDGIWDFFSNQ NAVDFTRKRLQEHNDLRLCCKQIVEEAIRRGASDNLTAVMVSFHQEAPPQLRVNRTGR VERSISAEGLHSLRVLLEGQ</aaseq>

Gene Sequence

<dnaseqindica>233..316#2082..2282#2546..2757#3080..3647#atcaaaatcgccttcgcttaataatctcctcctccgtattaaactcggtttttttagatattcccaagaatctctcctctcctttccattgttgctccgctcggattccgctcttcttcttcttctccgtctccgattcggtctcctcctcctctgctccgaccaggattctgcagcggcagcggcagctgctgcggttggtttttcaggctcggtggcggcaggcagcggcatgtgcgtggaggaactcgaaggcgcagagaggctcgattttggtggggttgcggagctcgagacaacaccggcagacttcgaggtgagtagagtaaactcccggatttcggaagctccctgttctttcttgctttctttctttctcgtgttcttgatgcattcgtttgtgatttgatttcgcaaccggatgcttttctttgggtgttgggatgatcggttgaggggaaatccaactgaggtggttgcgttgggtatactcttcgcgtgcccgaatgcttctattttcttattttcttttcttgtctggaaatctggagaaagtaggagagattagttagtttattagtaccactgaaataaatgaactcccttatcaattaatataatataatatttcaacgtttttttagtatagtaacaactagcagcaaataatttaggaaattgtttgttcttgaacggaaggtgtgaatgggaagatgcgctttgaattgttcagcggcaagaggaagtttctaggaggagagggattcagattgcgtgaaaaacacaatctttttattttttggggtgccttgtcgtagcttgtgggtgacttgtctgcttgcgcattgcgttgttctcctgtacttttgattctgtggcgagaagtcgtgtgggattttcagttgatgtgttcgtactactgcatcttgtgcgcatgcgtatctgctctgattctgatatgctgtgataagatttttatgcatgtgagtgacagtgagtactacctgaaaactcttcgtaccaagcagaaatgaactctcttaatactgtactgcagaattcaagaaagtagtgtactttgtttctcttcaaatcaagaaagtagagcaccaaatggatattagaaagaatgtcctttgtgatgttatgcctttagaagtcaaatgttatttacatgcagaactgtcaatcaataaatcagtactggtaaagttcagtggtacttctctctcagttgaggccaagaaaaatgttcttttcttaaaatgctggcctcctggttaagactgttgtttggacaatgcttagtgacccttgtgatttgtagctctagaagtactacataatatatcttctgatgaactgtgaaccccgtcgttagaccttgatgggatatctttgtcgctttatcttgtaatgatggttgcaagcaggaaatggattatggagtgttgcggaagaatgaacacctggtggattttcatggctctagtactaattagtttaacagggattaacagttggagtggctgtagtcctatcatattgtcacaactgttgtgccttttttttgtcaagtcatatgctcctgtgtctgttttgcctgaaaaatactaagctgtactgcacttttgtgcattcttgggtgttttgtttactaacgccctctctagaaatggccactcgtaggcttgtccaataagggtttgcctcttgtcacctagttgactgaattggggcttctgtttctgtgtcgctttcaactaggtggattagtatttaccgtaagtagttcattttcgatgtgatgaatgatgatgtcgacagcatcccttaaagcaatttgtgctcttggcagagttgaagtgctagtatattcatttgaagttttgaactagcatcatgttctgccaaagttggcattgatctgttattttttataaggctgacgtcctctgccaatgcttgttactatccttaaggcatttagaacttgtgttgtaattatgcttcatcagagttgcttcttgtttcttatttttgccatgctctaatcttttacctttcttggtaatgtgcagatggagaaagtttgtgagaacacagtatctcttgatttcaagcaggctaggtcgagcagttttgtcccagttatccgatcaggggactggtcggatattggaggtcgcgattacatggaagatgctcatgtctgcatctcagatctagctaataattttggtcataattcagtggatgatgagattatttccttttatggggtaacttcttgtttttactctctttattttgattcttcagttcccatttgatatggaaatcaatacctagttgagcattccagagtcctaaaacgtgcctaatccattgtaaagtaattaaaaaaatgtattatctttaagtgcagtgaactcataacagcagcagtttagagagattgcatctaccaaatcagatacatggatcatgaaattgtacatgcttgtctttttctaagatcatcttgtccttaaatttttcgcaggtctttgatgggcatggtggaaaagatgcagctcattatgtgcgtgataacttgccacgggttatcgtggaagatgctgattttcctcttgagctagagaaagttgtcaggaggtcatttgtgcaaactgatagtcaatttgcagagaggtgctctcatcagaatgcactttcttctggaacgacagcgcttacagcaatgatttttggaaggtactattcctactgcaggctagaagtagaatttagcctaggtcaatctgcttcttagcatgctatgtttgattcttaagtctggcaaactactcccaagcttgttctttggttggttattccgcattttctacgtgtgccttgcaaatattttctgaaagcttatccaatagcataaaattcttaggaatgttccacttaaggagttgaggtgttaggagtttcccctgaacctccgtgttgtcactacagagccctttgtctacttgttcagagagattcaggcgatttcatattctaatcattaggatgtactgtgcaggtctcttctggttgctaatgctggtgattgccgagcagttctttcaaggcgtggtaccgcaattgaaatgtccaaggaccacaggacttgctgcctcaacgaaagaaagcgtatagaatcacttggcggctatgttgatgatggctatttgaatggtcaattagcagtcactagagcattgggtgactggcatctcgagggtctgaaagaagtgggtgagccaggtggccccttgagcgcggaaccagagctcaagatgatcacactgacgaaggaagacgagttcttgataataggaagcgacggcatctgggacttcttctcgaaccagaatgccgtggatttcaccaggaagaggctccaagagcacaatgacttgaggttgtgctgcaagcagatcgtcgaggaggcaataaggcgaggggcctcagacaacctaacggcggtgatggtctcattccaccaggaggcccctcctcagctcagagtgaacaggacggggagggtcgagcggagcatatcggctgaagggcttcacagcctcagggtgctcctggaaggccaatgatagctccactgctatcatcagccttgaagttgtgcagaattgaagagaaaccttatcttgatgttgtgcagaattgaagagcaactgtatttagtgattttcggcatcttgctgtttacccccaatccattgtcgacattccagtgtgtgttattgtgtgagaataaaaccaacgaacctgagatctcaccttgcattgtgaggcccaggcattgtaaataagttgggagatagtaggtaaggagtgtgagtagtgtgcatccagggggctttgaggctcattatgcgatgtattcccctgtcatctgtaaaaaaataaataccgggattgttagtgtgattaaaagttctatcgtgtgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0799000, RefSeq:Os02g0799000