Os02g0805800

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Revision as of 02:59, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0805800| Description = ABC-1 domain containing protein| Version = NM_001054979.1 GI:115449346 GeneID:4331068| Length = 5909 bp| Definition...")
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Gene Name

Os02g0805800

Description

ABC-1 domain containing protein

Version

NM_001054979.1 GI:115449346 GeneID:4331068

Length

5909 bp

Definition

Oryza sativa Japonica Group Os02g0805800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35259300..35265208

Sequence Coding Region

35259512..35259958,35260083..35260284,35260426..35260496,35260771..35260883,35261024..35261117
,35261211..35261276,35261488..35261650,35261809..35261915,35262286..35262483
,35262572..35262697,35263168..35263272,35263424..35263567,35263707..35263759
,35263847..35264027,35264119..35264285,35264378..35264617,35264709..35265117

Expression

GEO Profiles:Os02g0805800

Genome Context

<gbrowseImage1> name=NC_008395:35259300..35265208 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35259300..35265208 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgctcgtgcggcccgccgtgctgcccgtctgcgccatgacgggcggcggcggtaacgacaagcggtcgccgccgcagcagcggtcgtggtggggcgggaacaagcagagattgccgcaccagccgcggcggcagccgggcgggaatggtggccgaggaggaggaggaggggcgctggaccaggtgctcggagtgctccgccgcgacggcgagttcctccaggcggcagccggcgcccccctccgcgacatcttctggctccgcttcctcgagaagaagaagcagcagcggcggcggaagcaaccaaaacctaaacccaaacctccggagcagcagcagcagcaagaggaagcggcggcggctatccaagccccatccttcccacctccctcctaccagccaggattatcatgcctggatcttatgactgctgatttcgaagccctgaagctgtatatcggctactcgaagcatgcaatcgagcagcaatttctcaaaggcaagcggcaacctcagcatcagcaaactcctaaaccaaaactccagcaacagcagcagcagcagaagaagaagcagcagcaacaagagcagcagaatcagacacttcaacctccggccttccctcccccatcgtaccctccagggctgtcttgtatggagctgatgatggctgatatcgaagctctcaagttgtacatcaactactatgtagccattctcaccactcctctaccccagcattacgatccggagatactgtcccgttacttcacctcgcgtcctcatattctcgcatttcgcaccattcagataatcttcgcatttgtctcggctgcagtaaagatgcaaatttctaaaagaacaaacttgatcacagatgccacctacagctgtaatagcaccggaagcaaaggtttcaatgcttcacaatacatggttggccagcttctcaaagagacatttctagatcttgggcctacttttgttaaagttggacagtccctctcaacaaggcctgatatcacaggctcggagatttctgaggcactcgccgagttacatgaaaaggttcctcccttcccgagaaaagatgcaatgaagattattgagggagaatttgagctccctgtatcacacattttcagttacatttctgatgagcctgttgctgcagcttcctttggacaggtttatcagggacgtacagttgatggtgctcttgtggccataaaggttcaacggcctaaccttcttccttcagtattgagggacatttatattctacggcttgggctttcttttgtgaggaaggtagcaaagaggaaaagcaacattgccctctatgctgatgagttgggtaaaggtttggttggcgagttggactacaatattgaagctgctaatgctaccaaattcctggaatatcattccagatattcatttatgctggttccaaaggttctcaagcaacttacgaggagaagagttttgacaatggagtgggtatctggtgaaaatcccacagatttgctttccttatctaaaggaatttcatcagaaattgctgaatcgtcagagaagcagaagatcgaagcaacagcccgtcttcttgacctggtcaacaaaggtgtcgaagcatcattagtgcagctcctcgagactggtttgttgcatgctgatcctcatcctgggaatttgcgttatacacctgaaggtcgtgtcgggtttcttgattttggtttgctttgtatgatggagaagaaacatcagcatgctatgcttgcaagtatcgttcacatagtaaatggagattgggcttctcttgtttatgatttgactgcaatggatgttgttccaccaagaactaatctacgccgagtgacaatggacttggaggatgcgttgggtgaggtgacctttgaagatggaattccagatatcaagtttagcagggtgcttggaaaaatatggtctgtggcatttaaataccacttccgtatgccgccgtactacacgctcgtcctgaggtcacttgcctctttggaagggctggccattgcagcagatggaacttttaaaacatttcaagcagcatatccatatgttgtgcggaagcttctatcggataattcagttgcaacaaggagactcttgcatcaggctattttcaacaaaaggaaagagtttcagtggaacaagattacagtatttctaaaattagcatcagcaaggggtaacttcaggtataatactggcgttttgcctgagaggaagggtttggatgttgcaaaacttgtagagatcagtgatgcatcttcttcactccatcttaaccgtgctacaccagaaagagcactacatactgcaaatctgtgcttgcggcttttactatcgaaggagagcattgtgataaggagacttgtaatgacagcgaacgcgaagtcacttgctcgtgacctgatctccaaagatgcatcgatttaccgggtgctcttaagtcgggtacttgccgatgtcatcttccagtggatggtgaaggcaactggttttaaacgagccggacagctcgagcctcacccacgcgtgacagcaggaaagaacgatgaagacctggggctgtccaaagaagcaccagccttggtgacattccagacagcagtaagagatcgcaggctgaaggtgatattctccaagttcgtcagggacataagagaggaccccatcctgatggtcagagtgagctggaacatgtttgctatctcggtggtctccgctgcaattggcgttcaccgtttcatcgtcgtcttgtcggaggaatttctgtctacattaccaccgcctgtgcctccgccgcggctagttcagattcagagcatatga</cdnaseq>

Protein Sequence

<aaseq>MAALVRPAVLPVCAMTGGGGNDKRSPPQQRSWWGGNKQRLPHQP RRQPGGNGGRGGGGGALDQVLGVLRRDGEFLQAAAGAPLRDIFWLRFLEKKKQQRRRK QPKPKPKPPEQQQQQEEAAAAIQAPSFPPPSYQPGLSCLDLMTADFEALKLYIGYSKH AIEQQFLKGKRQPQHQQTPKPKLQQQQQQQKKKQQQQEQQNQTLQPPAFPPPSYPPGL SCMELMMADIEALKLYINYYVAILTTPLPQHYDPEILSRYFTSRPHILAFRTIQIIFA FVSAAVKMQISKRTNLITDATYSCNSTGSKGFNASQYMVGQLLKETFLDLGPTFVKVG QSLSTRPDITGSEISEALAELHEKVPPFPRKDAMKIIEGEFELPVSHIFSYISDEPVA AASFGQVYQGRTVDGALVAIKVQRPNLLPSVLRDIYILRLGLSFVRKVAKRKSNIALY ADELGKGLVGELDYNIEAANATKFLEYHSRYSFMLVPKVLKQLTRRRVLTMEWVSGEN PTDLLSLSKGISSEIAESSEKQKIEATARLLDLVNKGVEASLVQLLETGLLHADPHPG NLRYTPEGRVGFLDFGLLCMMEKKHQHAMLASIVHIVNGDWASLVYDLTAMDVVPPRT NLRRVTMDLEDALGEVTFEDGIPDIKFSRVLGKIWSVAFKYHFRMPPYYTLVLRSLAS LEGLAIAADGTFKTFQAAYPYVVRKLLSDNSVATRRLLHQAIFNKRKEFQWNKITVFL KLASARGNFRYNTGVLPERKGLDVAKLVEISDASSSLHLNRATPERALHTANLCLRLL LSKESIVIRRLVMTANAKSLARDLISKDASIYRVLLSRVLADVIFQWMVKATGFKRAG QLEPHPRVTAGKNDEDLGLSKEAPALVTFQTAVRDRRLKVIFSKFVRDIREDPILMVR VSWNMFAISVVSAAIGVHRFIVVLSEEFLSTLPPPVPPPRLVQIQSI</aaseq>

Gene Sequence

<dnaseqindica>5251..5697#4925..5126#4713..4783#4326..4438#4092..4185#3933..3998#3559..3721#3294..3400#2726..2923#2512..2637#1937..2041#1642..1785#1450..1502#1182..1362#924..1090#592..831#92..500#gctttcgctgtaccaccaccaccgctgctagtgctcgcgcgctctcctgctgctgctagaagcttctggaatctggagccgagccgatgccatggcggcgctcgtgcggcccgccgtgctgcccgtctgcgccatgacgggcggcggcggtaacgacaagcggtcgccgccgcagcagcggtcgtggtggggcgggaacaagcagagattgccgcaccagccgcggcggcagccgggcgggaatggtggccgaggaggaggaggaggggcgctggaccaggtgctcggagtgctccgccgcgacggcgagttcctccaggcggcagccggcgcccccctccgcgacatcttctggctccgcttcctcgagaagaagaagcagcagcggcggcggaagcaaccaaaacctaaacccaaacctccggagcagcagcagcagcaagaggaagcggcggcggctatccaagccccatccttcccacctccctcctaccagccaggtttgtcgccgcgcggcagagaagcatctcgattgggctccgttgcgcacgcattgttcctgttgctgatggggattctcccaattggtaggattatcatgcctggatcttatgactgctgatttcgaagccctgaagctgtatatcggctactcgaagcatgcaatcgagcagcaatttctcaaaggcaagcggcaacctcagcatcagcaaactcctaaaccaaaactccagcaacagcagcagcagcagaagaagaagcagcagcaacaagagcagcagaatcagacacttcaacctccggccttccctcccccatcgtaccctccaggttgcttacaccaagcagtgcccaattagctgttgcttaatcatttaagtttcatcgattgcattattaacttgttttatgatttttgctagggctgtcttgtatggagctgatgatggctgatatcgaagctctcaagttgtacatcaactactatgtagccattctcaccactcctctaccccagcattacgatccggagatactgtcccgttacttcacctcgcgtcctcatattctcgcatttcgcaccattcaggtaaaagctgtaattactgttcatctttgctcttactaagcttcaactgataaatctaatagttcagtgtgccatgcttctgtatctgtagataatcttcgcatttgtctcggctgcagtaaagatgcaaatttctaaaagaacaaacttgatcacagatgccacctacagctgtaatagcaccggaagcaaaggtttcaatgcttcacaatacatggttggccagcttctcaaagagacatttctagatcttgggcctacttttgttaaaggtcaggttttcaggttcgatagctttaagccatggtagtggccactcggttcggattaatgttgacttgcttgtcttctgtgtgcagttggacagtccctctcaacaaggcctgatatcacaggctcggagatttctgaggttaggtaaaattactgcaggatacaataacatttctgcatttctttaattgcttcatcatcttcagaagtgttttgttgatcattaaacaatctccatagtctttctcaaaattaactggcgcacaccccaatcataggcactcgccgagttacatgaaaaggttcctcccttcccgagaaaagatgcaatgaagattattgagggagaatttgagctccctgtatcacacattttcagttacatttctgatgagcctgttgctgcagcttcctttggacaggtaatcatatcttgcaaaacttttcccgttcttttttaaatattagagacaggagctttgtagtttctgattaagccttattatatttttctgtactatctctttcaatttttctgttatgctcagtgtactcttgtttgttgtactttaggtttatcagggacgtacagttgatggtgctcttgtggccataaaggttcaacggcctaaccttcttccttcagtattgagggacatttatattctacggcttggggtacgtatgcaactatatctccattaaatatataagctcatctgtttttgagtgtttttaattctgccaagtgctaatgcccacatcttgttcatagaagatatatacaccataggttcttcgcctactgtttgacaaaaaagaaagttcatcttctgatcctcagcatgagcataatacctgatgccttctattttgttgtccctaaacaagctttaccgtttccctgattttgtgtttaattaagagtgttaatgtgactatgataacctgtgctgacacaagaaacattgtacagtactttctttcaatacagatggaccttgtctcatttaagtttatctgtatttagattaaatgttcttgcacttcattttatttctttattttgcttacaaaattatagcattgcagcatttttccactatagtcctagcaacttgatgtcttttctaccatatatgtttcagctttcttttgtgaggaaggtagcaaagaggaaaagcaacattgccctctatgctgatgagttgggtaaaggtttggttggcgagttggactacaatattgaagctgctaatgctaccaaattcctggtgctttggtcttgtctcctacctatactttactaacatatgcctattcctgttttggcgttttatctcataatttgtacttctgtaggaatatcattccagatattcatttatgctggttccaaaggttctcaagcaacttacgaggagaagagttttgacaatggagtgggtatctggtgaaaatcccacagatttgctttccttatctaaaggaatttcatcagaaattgctgaatcgtcagagaagcagaagatcgaagcaacagcccgtcttcttgacctggtatttatgttcgtcacaagttatttctaaattatctgcttcatttgtaaaaagatgagcaccataaataaattaatccacaacaatcagtgctcccgggtagcaaatatttggaattgaagtcgtgctcagtgaatagggcttttttgtcagttagaaactgcagtttacatggttctttgcaatattgtgtttgtttcagaaacacgcagcttaattttataaatatctatcacttcaatattgatgttcttttctctctgctgtggtagaaatataaacattataacaacaattactacatttcaataaacatttttcccctctggacaaaatgttttaacatcttgttaattactatgatgataaggtcaacaaaggtgtcgaagcatcattagtgcagctcctcgagactggtttgttgcatgctgatcctcatcctgggaatttgcgttatacacctgaaggtcgtgtcgggttagtgttaatttatctttttatgtacgctctataagaaaatgtcttcttactataatcagcagaatcatgttatacagtgggtctgatgtttttgtaatggttttcctctgtcattctccctttgagcaatagtaacaccttcctaattatgttaggtttcttgattttggtttgctttgtatgatggagaagaaacatcagcatgctatgcttgcaagtatcgttcacatagtaaatggagattgggcttctcttgtttatgatttgactgcaatggatgttgttccaccaagaactaatctacgccgagtgacaatggtaattcatcaaaatgcagaatatttatttatttatggttattacaagatggaaaaaaacaaaggttcttatctcatactccctccgtcccaaaatataagggattttggatggatgggacacatcctagttttacaaatctggaaagggagcttgtagtgttatttagtttgttattccattattatttttaatgtttgttgattggtaggacttggaggatgcgttgggtgaggtgacctttgaagatggaattccagatatcaagtttagcagggtgtgtagctttccctctttaagttcagttataaactgcggcatgtctctctctttatcggcatcttcctgaactgttaaaaacatcctttaggtgcttggaaaaatatggtctgtggcatttaaataccacttccgtatgccgccgtactacacgctcgtcctgaggtcacttgcctctttggaaggttagtttgtttagatgaaattcagtactgaactagctcaattataagtatgtgttgcttttttgtttctgacttgtacatatttgagcatgtgtttttttttggaggcttaccagcgtccccttttgtgtaatctgtagggctggccattgcagcagatggaacttttaaaacatttcaagcagcatatccatatgttgtgcggaagcttctatcggataattcagttgcaacaaggagactcttgcatcaggtattattattttacctcatttgtttacctgtatagtatatatgttaagttgatttaattaattgattcacttttcttatattttgtgcaacctggacaatatgtgctctttgaaacagtcaactcacccattttcgtttgtacgagatgtacagaaatcctgcaataaaatttgaaattctgagttttgttagttcacgatatcaaacgtcaaacacccaagggaaatggcatcgatgataatagagttctgacaccaattattaatacacaggctattttcaacaaaaggaaagagtttcagtggaacaagattacagtatttctaaaattagcatcagcaaggtcagttctctagttctgagcagaattgtgtgtaaacatcatgtttttttcactaaactgtatgaacagaatttcttctactatgatgcttacttgcttagttttcacgagatgcatctgatgatgttttcgtatgtgaaggggtaacttcaggtataatactggcgttttgcctgagaggaagggtttggatgttgcaaaacttgtagagatcagtgatgcatcttcttcactccatcttaaccgtgctacaccagaaagagcactacatactgcaaatctgtgcttgcggcttttactatcgaaggagagcattgtgataaggagacttgtaatgacagcggtatgtacttttccttgtttcccctctttacctgaatcgactggcccttttggctggatttctgaacgcataaaacacactaaactagaaatcaactgagctcaccatacttcctgttgcacagaacgcgaagtcacttgctcgtgacctgatctccaaagatgcatcgatttaccgggtgctcttaagtcgggtacttgccgatgtcatcttccagtggatggtgaaggcaactggttttaaacgagccggacagctcgagcctcacccacgcgtgacagcaggaaagaacgatgaagacctggggctgtccaaagaagcaccagccttggtgacattccagacagcagtaagagatcgcaggctgaaggtgatattctccaagttcgtcagggacataagagaggaccccatcctgatggtcagagtgagctggaacatgtttgctatctcggtggtctccgctgcaattggcgttcaccgtttcatcgtcgtcttgtcggaggaatttctgtctacattaccaccgcctgtgcctccgccgcggctagttcagattcagagcatatgaagagcagcaactatgccttggtgcatgaagtaacttttttactgggtatcccgtagctgtatataaacgttttcaggagcagaatcagccatcctgtagctgacagtagctcgatcagagttctccatggctagttctccgtaaatttgtcttctactattacaggcttcctttgaaaagggaattttgtgggaattaaactgatttttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0805800, RefSeq:Os02g0805800