Os02g0805900

From RiceWiki
Revision as of 02:59, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0805900| Description = Dcp2, box A domain containing protein| Version = NM_001054980.1 GI:115449350 GeneID:4331069| Length = 3394 bp| Defi...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0805900

Description

Dcp2, box A domain containing protein

Version

NM_001054980.1 GI:115449350 GeneID:4331069

Length

3394 bp

Definition

Oryza sativa Japonica Group Os02g0805900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35265575..35268968

Sequence Coding Region

35265748..35265929,35266303..35266370,35266537..35266640,35267224..35267376,35267840..35267938
,35268287..35268414,35268517..35268668,35268791..35268876

Expression

GEO Profiles:Os02g0805900

Genome Context

<gbrowseImage1> name=NC_008395:35265575..35268968 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35265575..35268968 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatggcgggcggcggggggctcaaccggtcgtcgtcgagggggcagctgccgccgcaggagcttctcgacgatctctgcagccgcttcgtgctcaacgtgcccaaggaggatttggagtcgttcgagcggatcctgttcttgctggagcaggcgcactggttctacgaggacaactccgtcgagcacaacccctccctcaagtcgctctccttcaaggacttcactacgctcatgttcaatagctgtgctgcgctcaggccataccgcgcgcaccttgatgacatttacaaggatttcactcactataagttccgtgtccctgtctgcggcgccatcatcctcgatgacacctacgagaagtgcttgcttgtgaagggatggaagtctagcgccagctggagttttcctcgtggaaagaggagtaaagatgaagaagatcatacatgtgctgttagagaagttctagaggaaactgggtgtgatgtttcgaagcttttaaaattggaagattatattgaagtttcaatgtggcagcaaagagtccgcctttatattataactggtgttaagggggatactgtttttgcgcctcaaactaagaaggagatcagtgagatctcatggcacaacatcgatgaactccttcctgctggtgatgacgcaatatctcgtggagtgaatgggatgaagctctatatggtcgcaccatttttgcagggtctaaaagcctggatagccacacatcgtcacccacagtatcagaaatcagacacgtctgctagaggtactgtgtggaaagcgaagaattcctcaactggagcggcgcctgttgagaaccccgttattactagaacaggatctgacccacaaactcttgacagccgcccaggtaaaagcttccgaaacttcaggttcgacacagcgagtatcctgcagtccatggaagcttccttcctacgtacctag</cdnaseq>

Protein Sequence

<aaseq>MAMAGGGGLNRSSSRGQLPPQELLDDLCSRFVLNVPKEDLESFE RILFLLEQAHWFYEDNSVEHNPSLKSLSFKDFTTLMFNSCAALRPYRAHLDDIYKDFT HYKFRVPVCGAIILDDTYEKCLLVKGWKSSASWSFPRGKRSKDEEDHTCAVREVLEET GCDVSKLLKLEDYIEVSMWQQRVRLYIITGVKGDTVFAPQTKKEISEISWHNIDELLP AGDDAISRGVNGMKLYMVAPFLQGLKAWIATHRHPQYQKSDTSARGTVWKAKNSSTGA APVENPVITRTGSDPQTLDSRPGKSFRNFRFDTASILQSMEASFLRT</aaseq>

Gene Sequence

<dnaseqindica>3040..3221#2599..2666#2329..2432#1593..1745#1031..1129#555..682#301..452#93..178#gtgcagcaactaacaaggcagtggattccggaggcgagcgagagagggagagaggaggggtgggagcgggggcggcgcggcggcggcggtggatggcgatggcgggcggcggggggctcaaccggtcgtcgtcgagggggcagctgccgccgcaggagcttctcgacgatctctgcaggtagcccccatcccaaaccctcgatcccatccatctcgcgagtttcttctcggcttttgctcagatcaaaccccccggaaaaaaactgaatcgaatcgccggtggaaacggaaaaatcgcagccgcttcgtgctcaacgtgcccaaggaggatttggagtcgttcgagcggatcctgttcttgctggagcaggcgcactggttctacgaggacaactccgtcgagcacaacccctccctcaagtcgctctccttcaaggacttcactacgctcagtaagctccggccgaactccaccttggattcatcggtggcgcttccgccgttggtttgatcgctgacaccgttattgttgttgtggtggtgtatgtgtgcagtgttcaatagctgtgctgcgctcaggccataccgcgcgcaccttgatgacatttacaaggatttcactcactataagttccgtgtccctgtctgcggcgccatcatcctcgatgacacctacgagaaggtaactacacccctaccccgatcaccttgtaccatattactttctacctagattaagtttagctgagtagctgcttatgttgcacaatgtgtgggtgtggcagcttggaaacaatgctaaagtaattctggtattttgtctgttgctgcaaataccttgtagatggtttattgtatagtcgcttcaatgcgtatagtttcaagctctatactgcaatgcactaggcacaaataaaaattacatctttggatctttaacccttgtagacctcaattcgcgcattctttttcactttgtcatcacatactcacaccccaagtttcattcactttttctccttctgtgcagtgcttgcttgtgaagggatggaagtctagcgccagctggagttttcctcgtggaaagaggagtaaagatgaagaagatcatacatgtgctgttagagaagtaaacttctgggctgaatcgatgttgttctttgcagttttatcaattaaattagacttataaaggatagaaatttgtataagtcactgaacaatagttttacatttctctagatcatcaagatgcttttttctacaattcaaatatcaaagttctagatattctaccatgctccaacacttactgttttcatttagtgtttgcattttaatccattgcatacaccatttgttgtttcttctctaaaaatgaattgcattgcctatctcatgtttaaaaaggaacaaaaaaagcttagcattggttagctaaatattgtcagctggtcctgtgcataattttttttaaagacatgcagtgatcacgtcttagctttcgtgaactagtttccatgttttgcacttccctttgcttattgcattactagtctatgtaagtgacatttatttacataacaatgcaggttctagaggaaactgggtgtgatgtttcgaagcttttaaaattggaagattatattgaagtttcaatgtggcagcaaagagtccgcctttatattataactggtgttaagggggatactgtttttgcgcctcaaactaagaaggagatcagtgtacgcaaatgttcagtgtttttatcatatttctttttgctcaactacattcagaatattttggactcgctatctgaaaacgaaaaggggaattgcgtgacatgattgcaaaatgatacaatatgactttgattgtttgattaatggccataatccttcgtgtgtgcttagcttatagtaaggaatagctcctttccgattaacaagctgttctacagatttttttttccataatgatctgctaaatttcaactcagttgagaagagactcaatttgaagcattctgtaatcactttattgttacttaactgacaagttagtacatgttcagccacatatttttgcttgctgactgaggtactttatctttttatgctggtgtatgaatcacttgcaatgctagctgtcttgtgtggttgtgtttactaccttgtgtctacttgaagactgtagttactgtaactacaatttattgtttttttcgttgtagtttatccattgacccttttgagttttgaacctctctttggttaaagagagttaaataggcattactgagtcgtgatcctctgaaattgacaggagatctcatggcacaacatcgatgaactccttcctgctggtgatgacgcaatatctcgtggagtgaatgggatgaagctctatatggtcgcaccatttttgcagtcagtacctttttgacccactttagtttttttttcttggtgcagacagtcatcatgagcatgttggtttaatggcttctaaaatatttaacccgcatccacatttcctgagtgtgaatttgtttctacattgtttaattcctttacattttacttcttcatccaggggtctaaaagcctggatagccacacatcgtcacccacagtatcagaaatcagacacgtctgctagaggtttcttctgatcctccctttgcccatttatgttaggacctaaaaatgttaaattatttgtcaattatttttagcagttctgcttcaagtttcgcttgttgttttctaagttaatctgcagaagtagttctcaactgagcaaaatatcagctagtacataattaaagcaggtctgatcctggcatagtcatgaactcatggctatacttatgatcaacttttagtacatagtgtgtgtagtaccattggtgaacctggtgcaatgtactcctagtatgtaatttgtgataaaattggtgaacctctggtgctacatataccgtttgcctctataattgtgataacatctatggtaccacacatcatttgacaggtactgtgtggaaagcgaagaattcctcaactggagcggcgcctgttgagaaccccgttattactagaacaggatctgacccacaaactcttgacagccgcccaggtaaaagcttccgaaacttcaggttcgacacagcgagtatcctgcagtccatggaagcttccttcctacgtacctaggagcctgacaaagcatcaccccatgtgtgtatgcttgatgtgtatagactatgtaagccaagggcgtgtcttctgttgttaactcagctttttcttcacttttctagttgtatctgtaatcctgaatgcaacagatgcttctaccattgtgataatatccctacatttcgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0805900, RefSeq:Os02g0805900