Os02g0806600

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Revision as of 02:59, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0806600| Description = Epsin, N-terminal domain containing protein| Version = NM_001186265.1 GI:297721662 GeneID:9268417| Length = 5499 bp|...")
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Gene Name

Os02g0806600

Description

Epsin, N-terminal domain containing protein

Version

NM_001186265.1 GI:297721662 GeneID:9268417

Length

5499 bp

Definition

Oryza sativa Japonica Group Os02g0806600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35315524..35321022

Sequence Coding Region

35315887..35316410,35316494..35317460,35317826..35318025,35318235..35318419,35318498..35318596
,35318684..35318725,35318884..35319228,35319324..35319469,35319581..35319664
,35319792..35319870,35319964..35320043,35320192..35320243,35320360..35320394

Expression

GEO Profiles:Os02g0806600

Genome Context

<gbrowseImage1> name=NC_008395:35315524..35321022 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35315524..35321022 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagaaagtattcgatcaaacagtccgggacctaaaaagagaggtgaacaagaaggtcctcaaggtgcctggtatagaacaaaagattcttgatgccacaagcaacgagccatggggcccacatggatcactcttggcagaaatcgcccaagcaacacaaaattaccatgagtaccagatggtcatgaatgttgtgtggaagaggatcaatgacactggtaaaaattggcggcatgtttataagggattgattgtcctggattacttggttgctcatggtacagagcgagttattgatgacataagggaacattcttatcagatatcgacactagctgatttccagtatatcgattcgagtgggagagatcaaggtagcaatgtacggcggaaatcccagagccttgttagtttagttaatgacaaagagaggatacaggaagttaggcagaaagcacttgctaccagggacaaataccggagtgcattcgccaccagtggaacacacaggagcccaggtggctatgacaatgaccgctatgaaggaagctatggcagtaggtatgataacagaaatggctacgggggagaaagagagtatggatatagggatgatgacagatatggtgttgctggaactactcccaatcgggaaggagatcgttattctagggattctaatgagcagcgctacagcagagatagagaagatgagtacaaaggaagtcatagcaaccatgaatatgcagaaggatcaggtcgcaggagctatggacgagatagggattcatatggggatgatgaagcttattcatcccgtggccggcaaagcaatgctgacggacctactcaggatgagaggcccatggagcggaagccttctaaccagcagattgcttcaccaccgccaaactatgaagatgtcacaagagatacacaggataataatcatgatggacgaaatggagggactgtgcctgtgccagttgctgcagcaaaggtgtcttcacctccaagaacaagtgtacccccaggtcaggtgaatggtgtacatgataatactgtggaagacgtacctgcaccaccacctactcatcctgaagttaatgggtttgacgagtttgatcctcgtggatcagtaccagatacctcacctccagtgaacccctcacaagccgtgaatagcttggaaatggatttattcggaccagatcctattaattcgttggctttggtatctgtgcctcagccaactgccagcccaaatgttgagccatcagcaaatccaggatttgagagtaacagttttatgggcatgccaccggcttctactggattcaatgaggcctttgatgcaactaatccttttggggatcctacgcctttcaaggctgttcatgaagaaactcctgcagtttctcagacaaatgctgcacctgctggttctttccatgctactgaacctgctgcagatgcaaatcctttccagcctgcttcagcagcaagctttggttttggagacactcttggcgacctctcttttggatcgaatgctgcacccgggcagcaagatatttttgtgcccacctcatcacattcagaggtaccacctgcaaacccatctgtgcaccctgaacaggcagtcccatcttatgtctcctcccaggcacctcagcctgcagctgctggtccacaaactcatgctgctcccgcttcatttgcttctcaagcacctcccacttcatttgcttctcaagcacctcaagcaggggcaccctatcctcaggctgcctccacatttcctcattcacaagcatctcatcctgcagccactaatccatctacaatccctcagaatgttgccacaccatttgctcctttacaaatgcctcaacctgtaccatcaggccaatcaaactattttatgcaaccagttccagggactggcattaatggcatgtctggggctccttcacagaatggagcaccatcctacatcccttcacaggcttctcaatttgcagctccaacaaatctacagccctctcagccaaccttccccccacaaactgccatggcagcttcacaggcaacatcaatttctcgaggggcatctcagcctcttgcagtgccgaattcaatgccttctggtgtgaactttccattacaatcaagttcatcagctccccctgaaacaatcctttcagccttgcaagttagtcagtctgagccagtgaagaaatttgagtccaaatctacagtttgggctgatacattgagccgaggtttagtcaatctggacatctctggaccaaaggctaatccgcacgctgatattggagttgacttcgattcaatcaatcgcaaggagaaaaggcaagaaaagaaagtctctcaagctcctgtggtatctacgatcactatgggcaaagccatgggaactggctccggcatcggtcgggcaggtgcgagtgccatggcacctccagccaacccaatgggtgcaagcaggggcattggcatgggtatgggcgctgctggttccggttacggtggtggaatgggaatgaaccggccaatgggcatgggaatgggaatgaaccaacaaatgggtatgggaatggggatgaaccaacaggccatgggaatggggatgaaccaacaggccatgggaatggggatgaaccaacaaccaatgggaatgaacatgggcatggggatgaaccagggtatgggaatgaacatgcggcctcctatgggaatgggtccaggtagtggatataatccaatgggtaccggatacggagggcagcaaccatatggtgggtacaggtga</cdnaseq>

Protein Sequence

<aaseq>MKKVFDQTVRDLKREVNKKVLKVPGIEQKILDATSNEPWGPHGS LLAEIAQATQNYHEYQMVMNVVWKRINDTGKNWRHVYKGLIVLDYLVAHGTERVIDDI REHSYQISTLADFQYIDSSGRDQGSNVRRKSQSLVSLVNDKERIQEVRQKALATRDKY RSAFATSGTHRSPGGYDNDRYEGSYGSRYDNRNGYGGEREYGYRDDDRYGVAGTTPNR EGDRYSRDSNEQRYSRDREDEYKGSHSNHEYAEGSGRRSYGRDRDSYGDDEAYSSRGR QSNADGPTQDERPMERKPSNQQIASPPPNYEDVTRDTQDNNHDGRNGGTVPVPVAAAK VSSPPRTSVPPGQVNGVHDNTVEDVPAPPPTHPEVNGFDEFDPRGSVPDTSPPVNPSQ AVNSLEMDLFGPDPINSLALVSVPQPTASPNVEPSANPGFESNSFMGMPPASTGFNEA FDATNPFGDPTPFKAVHEETPAVSQTNAAPAGSFHATEPAADANPFQPASAASFGFGD TLGDLSFGSNAAPGQQDIFVPTSSHSEVPPANPSVHPEQAVPSYVSSQAPQPAAAGPQ THAAPASFASQAPPTSFASQAPQAGAPYPQAASTFPHSQASHPAATNPSTIPQNVATP FAPLQMPQPVPSGQSNYFMQPVPGTGINGMSGAPSQNGAPSYIPSQASQFAAPTNLQP SQPTFPPQTAMAASQATSISRGASQPLAVPNSMPSGVNFPLQSSSSAPPETILSALQV SQSEPVKKFESKSTVWADTLSRGLVNLDISGPKANPHADIGVDFDSINRKEKRQEKKV SQAPVVSTITMGKAMGTGSGIGRAGASAMAPPANPMGASRGIGMGMGAAGSGYGGGMG MNRPMGMGMGMNQQMGMGMGMNQQAMGMGMNQQAMGMGMNQQPMGMNMGMGMNQGMGM NMRPPMGMGPGSGYNPMGTGYGGQQPYGGYR</aaseq>

Gene Sequence

<dnaseqindica>4613..5136#3563..4529#2998..3197#2604..2788#2427..2525#2298..2339#1795..2139#1554..1699#1359..1442#1153..1231#980..1059#780..831#629..663#cagggaagaagggaggacgcgacgcgacacgagcgcgagaggaaagcggaggagatcgaggagaaactccatttccccccccctcgccttctccgatttccctcgcgtggaatccccttggactcctccccctcccgccgccgcgcgagccgggcacggcgagcggcgccgccctgcccccgccgatctgctctgccttctcctcaggttcgccgtcttgttggattcgcctttttttgcgttcgtttcgggcgccgtcagatccccgcgccgtgtttggtgagcgtgagctaacggaatggcacggccagatctcgtgggggggatccgaggcggtcggcggatgctagatctggggcggggagctgtacgatcgccgccgcgttagatctggtcccgttgctcgcgccggattccgctgcttttgttgttcaaattgttttggtttcgagctttacctttgcgggctattgggttggatgctccgtgatgcttcgaagctacgggagaatgttagtgatgatgcttttttggatcttatggacgaattttatacaggggcttgcaccgaggaggaggaggaggagagagctgagcagaacaagctagattctcaaggaagggcgccatgaagaaagtattcgatcaaacagtccgggacctgtacgtgattcacctgccatcttatcgtataccgtgtgcagttcgagctccgttcgtttgcttgatacaatatatttctgtcgtaatttaatctgttctggtctttgtttttgcagaaaaagagaggtgaacaagaaggtcctcaaggtgcctggtatagaacaaaaggtaacagagatctctgctgctccctcacgcaaaagcatgtgttaagcatgatagttactgaatttaatggattgctcgcctttcaattttcatgaagcataatcagtgacatcagacttattccattttgctcgatggcctcatacagattcttgatgccacaagcaacgagccatggggcccacatggatcactcttggcagaaatcgcccaagcaacacaaaattagtatgttttcttcttgggcttttgttatttgatcacctttgtaacaaacaaaacctaattttcccggtgccaatgccctttgcgtgcttgcagccatgagtaccagatggtcatgaatgttgtgtggaagaggatcaatgacactggtaaaaattggcggcatgtttataaggtgtgttttcttatttgcttttaccccttaaccttcagtgttctctccttttatggatgtaagtggaaatagccacagcaatatgtagggcagtttattctgatgctatactatgcttgatatgtagggattgattgtcctggattacttggttgctcatggtacagagcgagttattgatgacataagggaacattcttatcagatatcggtattgctggaaatctattttctgtttcatatactccatgtagtttctgcctcaagtttcgtcagtatcttagttgcttgatgctcattaactttgttattataattgcagacactagctgatttccagtatatcgattcgagtgggagagatcaaggtagcaatgtacggcggaaatcccagagccttgttagtttagttaatgacaaagagaggatacaggaagttaggcagaaagcacttgctaccagggacaagtgagtgtgcttgcttttcgttatattggtacattgtgttttgtggacatgcatattctctgttttattgactacttttatgtgttcatctgaagataccggagtgcattcgccaccagtggaacacacaggagcccaggtggctatgacaatgaccgctatgaaggaagctatggcagtaggtatgataacagaaatggctacgggggagaaagagagtatggatatagggatgatgacagatatggtgttgctggaactactcccaatcgggaaggagatcgttattctagggattctaatgagcagcgctacagcagagatagagaagatgagtacaaaggaagtcatagcaaccatgaatatgcagaaggatcaggtcgcaggagctatggacgagatagggattcatatggggatgatgaagcttattcatcccggtccgtttcattgtttttttctggatttaaatttttacacgttcatatagcagtcaataagcagcctataagattgttatttcattaagttgctaatattcacttggttatttatggttctttatggaccctaacttacatacatttttccatcacagtggccggcaaagcaatgctgacggacctactcaggatgagaggtaaatgatggagaaatgctaagttcataacatattaacttgtcttatttgagcaatttatcttatgttctgtacctccttcggtaggcccatggagcggaagccttctaaccagcagattgcttcaccaccgccaaactatgaagatgtcacaagagatacacaggataataatcatgatggacggtatgtattttatgttataatgtttgatcagtagacatgacaacgatctctgatttctgaactaccgttcaatatcagaaatggagggactgtgcctgtgccagttgctgcagcaaaggtgtcttcacctccaagaacaagtgtacccccaggtcaggtgaatggtgtacatgataatactgtggaagacgtacctgcaccaccacctactcatcctgaagttaatgggtttgacgagtttgatcctcgtggatcagtaccaggtatattttcctccttttttgacacattgcattgcatatgaaccaaaagcccacattaatagaaagcatcacacaatattattttctgatacatttatgaagagaactgtagaaggaatgacccctattctggcattatactagtatcaatatcttttggtagtaattgagtactgattttttttttcaatatttgcatcccatgtcagatacctcacctccagtgaacccctcacaagccgtgaatagcttggaaatggatttattcggaccagatcctattaattcgttggctttggtatctgtgcctcagccaactgccagcccaaatgttgagccatcagcaaatccaggatttgagagtaacagttttatgggcatgccaccggcttctactggattcaatgaggtacgcgtctattgaacataaggccattcacgatactaatctcatgttctaatggtggcatggatctgttatactgaattgtagttctatgattttgtgggcttgaataattgcacgcgacaaagtgacacacactataggacaaaactttatttaaatcatgttgtttcttaaatgtatttaaacagcagcagtagtggtcacagaattgtggtcagtacaaactttttgaattaacatcaagatacttgttttggtgatgggatggttgtgttgttctatgtttatttgattggaatttgccttgtctggtagttaaatccaaccacctgttcatcttatccttttggattttgaccttgcaggcctttgatgcaactaatccttttggggatcctacgcctttcaaggctgttcatgaagaaactcctgcagtttctcagacaaatgctgcacctgctggttctttccatgctactgaacctgctgcagatgcaaatcctttccagcctgcttcagcagcaagctttggttttggagacactcttggcgacctctcttttggatcgaatgctgcacccgggcagcaagatatttttgtgcccacctcatcacattcagaggtaccacctgcaaacccatctgtgcaccctgaacaggcagtcccatcttatgtctcctcccaggcacctcagcctgcagctgctggtccacaaactcatgctgctcccgcttcatttgcttctcaagcacctcccacttcatttgcttctcaagcacctcaagcaggggcaccctatcctcaggctgcctccacatttcctcattcacaagcatctcatcctgcagccactaatccatctacaatccctcagaatgttgccacaccatttgctcctttacaaatgcctcaacctgtaccatcaggccaatcaaactattttatgcaaccagttccagggactggcattaatggcatgtctggggctccttcacagaatggagcaccatcctacatcccttcacaggcttctcaatttgcagctccaacaaatctacagccctctcagccaaccttccccccacaaactgccatggcagcttcacaggcaacatcaatttctcgaggggcatctcagcctcttgcagtgccgaattcaatgccttctggtgtgaactttccattacaatcaagttcatcagctccccctgaaacaatcctttcagccttgcaagttagtcagtctgagccagtgaagaaatttgagtccaaatctacagtttgggctgatacattgagccgaggtttagtcaatctggacatctctggacgtaagtggcttctctctggctgtcttctacacttgtacttttgtacttttgtgatctgacgtaatcttatgtctgttttacagcaaaggctaatccgcacgctgatattggagttgacttcgattcaatcaatcgcaaggagaaaaggcaagaaaagaaagtctctcaagctcctgtggtatctacgatcactatgggcaaagccatgggaactggctccggcatcggtcgggcaggtgcgagtgccatggcacctccagccaacccaatgggtgcaagcaggggcattggcatgggtatgggcgctgctggttccggttacggtggtggaatgggaatgaaccggccaatgggcatgggaatgggaatgaaccaacaaatgggtatgggaatggggatgaaccaacaggccatgggaatggggatgaaccaacaggccatgggaatggggatgaaccaacaaccaatgggaatgaacatgggcatggggatgaaccagggtatgggaatgaacatgcggcctcctatgggaatgggtccaggtagtggatataatccaatgggtaccggatacggagggcagcaaccatatggtgggtacaggtgagattatactgtacaatgcgatactcagtgaggggttgagaaacagtttaggaggcgtttggattttggtcacctggattttctttatgtatggtttcttttgttttgggtggggggggggggttataatttttcatcactattcttttcctatccatgttggatattgtatctactaaatatatgacatgtgaacgggggcaatgctacaactactgtgttgtgttggatgcaaagccttaatactataatcatcaatgtagctgtataattctctataggatgtttttttttcagtaaacattgtgattgtttcagcgttcttgctggcttgacaataaaaaggctgtaccattttgttcaa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0806600, RefSeq:Os02g0806600