Os02g0809500

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Revision as of 02:59, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0809500| Description = Conserved hypothetical protein| Version = NM_001054998.1 GI:115449422 GeneID:4331088| Length = 3350 bp| Definition ...")
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Gene Name

Os02g0809500

Description

Conserved hypothetical protein

Version

NM_001054998.1 GI:115449422 GeneID:4331088

Length

3350 bp

Definition

Oryza sativa Japonica Group Os02g0809500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35483499..35486848

Sequence Coding Region

35483864..35484101,35484234..35484610,35484701..35484950,35485074..35485239,35485623..35485725
,35485821..35485946,35486086..35486299,35486396..35486676

Expression

GEO Profiles:Os02g0809500

Genome Context

<gbrowseImage1> name=NC_008395:35483499..35486848 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35483499..35486848 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgagtaatggccacagcaacagcagcaagagccttgaaaggtttatatctcggagggctctgcagatggggagctctgctccctgcaagacatgggcactgggcttcttctgtggtgtctgcattgtgtacctgtttggtgttgctctcccacctatccaaatcctgatgatccgatcggtacatccaccggttcggcgagcaatcttgttgaattcaacatcaactgaacctggtggagctacagaaacagatgacttatctgttttacaagaaaagatagaaatagccaccaatagcaaggacatcaatgaagctgataaaatgcatttgtataatgcttggagcactttactggatacgaccagtgatgaagttatgaaaagttcagacgtgccgcggccgcctcatctggagaattgcaggcttaaatgggaaagaaataagaaatttgacagttatagcgacaacggcgtatttcctccttggacattatggaaagggtcacttggtcttgagttattcaaccagaactattcagattcagaagagtggaggcaaatgtttttcaggtcaaatgctaaatctgacagggcgccatatccaccttggattgcaggatcagatgaagaaaactatccactgaccagacaagtgcagagagatgtatggattcatcaacatcctccaaactgcagtgatccaagcttgaggtttctctatgcagactgggagaggctaccgggatttggtataggtgcgcaactcgctggaatgtcgggacttcttgctattgctataaaagagagaaggattctagttgcaggatactacaaccgtgctgatcacaatggttgtaaaggcctagcaagatctagctggtcatgctactttttacctgaaacatctgcagactgccagaaacgtgctttagatctcatgcaaagcaaagattctagggaaaatggaattataaaagttaaggaaaactatacctccaagcaaatatgggctgggcatatacctaggatatgggggagaccatggaaatatatgcaaccgacaacagagatagatgggagattggttaaaaatcattgtaaaatggatcggagatggtggattgcacaggccctgagatacctaatgaggttccagtcagagtacatgtgcagattactgaatgtggctagacattcagcatttggcatgcaggcagcaaagatggttcttgaaaatgtcccagatccaccaaagcctagcattagcagaacagaatctgacattgagcgacttgtgtggtcggagcataaaccatatatacccgggcctcttatcagtatgcatgtaaggatgggagataaagcttgtgaaatggaagtagttggctttgagaaatacatggagttggctggtcgtcttcgaaaacgttttccaagtctcaagaacatctggctttctactgaaatgcaggaagttatcgacgaaacaaaattatatcccaaatggaatttctatttcacaaatgtgacgcgccaagatgtcaatgtgagcatggcaatgtatgaggccagcctgggccgtgagaccagcacaaactatccccttgtcaatttcatcatggccactgaagcagatttcttcattggagccctgggatcaacctggtgctacctcatcgacggcatgcggaacaccgcaggaaaggtgatgtctggctatctgtcggtgaacaaggaccggttctggtaa</cdnaseq>

Protein Sequence

<aaseq>MMSNGHSNSSKSLERFISRRALQMGSSAPCKTWALGFFCGVCIV YLFGVALPPIQILMIRSVHPPVRRAILLNSTSTEPGGATETDDLSVLQEKIEIATNSK DINEADKMHLYNAWSTLLDTTSDEVMKSSDVPRPPHLENCRLKWERNKKFDSYSDNGV FPPWTLWKGSLGLELFNQNYSDSEEWRQMFFRSNAKSDRAPYPPWIAGSDEENYPLTR QVQRDVWIHQHPPNCSDPSLRFLYADWERLPGFGIGAQLAGMSGLLAIAIKERRILVA GYYNRADHNGCKGLARSSWSCYFLPETSADCQKRALDLMQSKDSRENGIIKVKENYTS KQIWAGHIPRIWGRPWKYMQPTTEIDGRLVKNHCKMDRRWWIAQALRYLMRFQSEYMC RLLNVARHSAFGMQAAKMVLENVPDPPKPSISRTESDIERLVWSEHKPYIPGPLISMH VRMGDKACEMEVVGFEKYMELAGRLRKRFPSLKNIWLSTEMQEVIDETKLYPKWNFYF TNVTRQDVNVSMAMYEASLGRETSTNYPLVNFIMATEADFFIGALGSTWCYLIDGMRN TAGKVMSGYLSVNKDRFW</aaseq>

Gene Sequence

<dnaseqindica>366..603#736..1112#1203..1452#1576..1741#2125..2227#2323..2448#2588..2801#2898..3178#tggtttgtcagtgacttctgcatgtggctgtgttgtgcgactaccttggtccttcctgattagtgatggggtttagcgcatggtaatctgtttaatgtgcatgcatgccgatgatctttcatgtagactgtatattcctgtgcttagaagccatctgtggatcaaatccatgttgtcttccaagcaattagctcatctgtgatttgatttgtactttactctttgggaagaatttttttgtctttatagcttttcttgcatgaattccattccatgatgcatttggtgtttcttgattggaggcagtgtttgaatgcaagggtcaggttgcgctggtaggtatctgaggaattcaggaattgaggatgatgagtaatggccacagcaacagcagcaagagccttgaaaggtttatatctcggagggctctgcagatggggagctctgctccctgcaagacatgggcactgggcttcttctgtggtgtctgcattgtgtacctgtttggtgttgctctcccacctatccaaatcctgatgatccgatcggtacatccaccggttcggcgagcaatcttgttgaattcaacatcaactgaacctggtattttgcgaacaccatttcgcataaaaaattcagtagtagtgtagtactatatgttcatctaggctgaatgtattttttcttttccttttagctgtgacaatgtctgtgtaaccagcttcttccatgcaggtggagctacagaaacagatgacttatctgttttacaagaaaagatagaaatagccaccaatagcaaggacatcaatgaagctgataaaatgcatttgtataatgcttggagcactttactggatacgaccagtgatgaagttatgaaaagttcagacgtgccgcggccgcctcatctggagaattgcaggcttaaatgggaaagaaataagaaatttgacagttatagcgacaacggcgtatttcctccttggacattatggaaagggtcacttggtcttgagttattcaaccagaactattcagattcagaagagtggaggcaaatgtttttcaggtcaaatgctaaatctgacagggcgccatatccaccttgggtgtgtaaacttgcctgaactcgtaattgtcttgtcagtactactatgaatgcagtattctaacttttgagttacaacaaaactttaaagattgcaggatcagatgaagaaaactatccactgaccagacaagtgcagagagatgtatggattcatcaacatcctccaaactgcagtgatccaagcttgaggtttctctatgcagactgggagaggctaccgggatttggtataggtgcgcaactcgctggaatgtcgggacttcttgctattgctataaaagagagaaggattctagttgcaggatactacaaccgtgctgatcacaatggttgtaaaggtaggaacaatccagcttaccttgtagattatgaattgataatatgatatgtgtagtgctacctcaagttgtaacttttaactgacatgataactgagataactgtcaatgttcaattttcaggcctagcaagatctagctggtcatgctactttttacctgaaacatctgcagactgccagaaacgtgctttagatctcatgcaaagcaaagattctagggaaaatggaattataaaagttaaggaaaactatacctccaagcaaatatgggctgggcatatacctaggtaccatttcgatgcgctggtcctgtttctggaaagctaaacacgcacccaatactgatgagctatacacatttactccctccgttcctaaatatttgacaccgttgattttttaaaacatgtttaaccattcgtcttattcaaaaaatttaagtaactattaattcttttcctatcatttgattcattgttaaatatacttttatgtatacatatagttttacatatttcacaaagttttttgaataagacgaatgatcatgtttaaaaaagtcaacggcgtcaaatatttagggacggagggagtatatctcattcatcgctctgttcttgtggctcttgccgattcatgcacatgttttctgaaacctgctgttatgcaggatatgggggagaccatggaaatatatgcaaccgacaacagagatagatgggagattggttaaaaatcattgtaaaatggatcggagatggtggattgcacaggtgtgtacctcatgccaagatgaatgatgagcatattttgtgctattcataatggggatgcaaatatgcttcatcaacctgaaacttccatgtaggccctgagatacctaatgaggttccagtcagagtacatgtgcagattactgaatgtggctagacattcagcatttggcatgcaggcagcaaagatggttcttgaaaatgtcccagatccaccaaaggtttgtattagcaatctgaagatttttatgttgctttgttccgtggagagttttgtctgcgcatcattcggataaagcaacattagcactaaccaccttacttttttagataagtaactgaaagatttcacaattgcagcctagcattagcagaacagaatctgacattgagcgacttgtgtggtcggagcataaaccatatatacccgggcctcttatcagtatgcatgtaaggatgggagataaagcttgtgaaatggaagtagttggctttgagaaatacatggagttggctggtcgtcttcgaaaacgttttccaagtctcaagaacatctggctttctactgaaatgcaggcaatttaactcctcaattctcatccctcgtatggtgtaaattaatttcttcatttcattggtctgtaatttaactctgctaatgctgaaatgtaggaagttatcgacgaaacaaaattatatcccaaatggaatttctatttcacaaatgtgacgcgccaagatgtcaatgtgagcatggcaatgtatgaggccagcctgggccgtgagaccagcacaaactatccccttgtcaatttcatcatggccactgaagcagatttcttcattggagccctgggatcaacctggtgctacctcatcgacggcatgcggaacaccgcaggaaaggtgatgtctggctatctgtcggtgaacaaggaccggttctggtaagcaattcagaagctgctaaaccttgttcattgtattttagctcctctgaatagatatgtttggcctaagtttgcttctgtacggcaatagggcatgtatatatgcaccatcctagcagataactttagcgtgtgaaacttctgagctaataggaaaacagtatcgttatatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0809500, RefSeq:Os02g0809500