Os09g0278300

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Revision as of 07:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0278300| Description = Phosphatidylinositol-4-phosphate 5-kinase family protein| Version = NM_001069289.1 GI:115478317 GeneID:4346598| Leng...")
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Gene Name

Os09g0278300

Description

Phosphatidylinositol-4-phosphate 5-kinase family protein

Version

NM_001069289.1 GI:115478317 GeneID:4346598

Length

6686 bp

Definition

Oryza sativa Japonica Group Os09g0278300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6365968..6372653

Sequence Coding Region

6365968..6366207,6366369..6366629,6366733..6368139,6368488..6368614,6368700..6369019
,6369102..6369863,6370649..6370798,6370907..6370996,6371096..6371240
,6371340..6371517,6371653..6372348,6372455..6372653

Expression

GEO Profiles:Os09g0278300

Genome Context

<gbrowseImage1> name=NC_008402:6365968..6372653 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:6365968..6372653 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatggggtcgatgatggccttatctgtagtacttcttgctataagatgtgtggccatgctgataaatcttcaataattgatggtgagattggttggccgagcatggaaataagcccttgcagcactccttatggcactcctctttttagccgagaaagttcttgttcaagctttgccagttgcttttcaagcctcgatgactacctagttgaaactgactctgaagaggaaattgaggtcttagatactggccaacttcatcccgggatcttattctctgatgaatcgatggagcaaagaaaagcggattctgtacaggtggaagaatatcaagtcagtcattctgctgttgttaacgatgattctagtatttccattccgacaaaccagaataattcatctggtcaactgcagttggagatacatcttgatgccaccaatgaaaaatctgttccatccaatgctattttggatgcaaatgtaacagatcctcatcaagaggtcatttccaatggtggacttatagaagcatgttatggtgtaccagtggatgatattgatctcaaacaatccaatatcttagatggtgaagagattactagccttcctatggccgacaatgaaatgactccactggatgatcaaattatggaccaaattgatgatatgaaggaaattagtagtatagtttacaacagtacaataagcgctgagcagcatgtgaattcgggttcagagtttgagaaaggaaatgaatccagtgataacctttacccgctagtaatgcccagttttgatacagaccctcacatttggttaccaccagacccagtcaataaggacgatgacactgatattgttgctaataatgatgataatagtgacaacaatgctgctgaagggctctctttgtctgatggagaagctgacaagaactggcttgatatcgttgcttcattatcatggcgtactgcattacttgtcaagcctgatgccaatgttggaaatgcaatggatccttgtatgtatgttaaggtgaaatgcatagcttcaggatctatcgagcaaagtgaagtcatcaacggtcttgtttttaagaagagcgctgctcataagcagatgcgtgccaacatgaagaatcctagactgttacttctgcagggtgttgttggtcattcttctgcagggctattgtcaatggattcaatgaaacaggaaaacgatcacttggagaaaattctcagtgatgtaattatcaaatgcaaacctgatgctatattggtggagaaagcagtctcacgaaataatgttcttgcaacacccaaccttattaaacagtgcgagtctctccattttgaaaagtttattgaggagcataatataactggaggaggaaagaggtcagccaaaactttgttatttctagaaggttttcgaaagcctttgggatgcacgattttactgaaaggatcaacaagtgaagaactgaagaaagttaagcgtgttcttcatttcactgtttttgcagcttatcatttgatccttgaaacttcattctttgctgatcaaaggttatttgcaacgggaaaaaatgccatggagaaaggcaactgtttgaaaactgatccgcagctgcttgttccttgtactgctgctccatcctccaaaatctgttctgatattgcacaaaatagtgaccccacacaacaggctttgaacagtcttgcttcggatggagagtatgttaatcaggatgattttgttgatccagagaaatccgtgtgcatgcacgattccaaaattgaaacatctagagagtatgcggacagaaaacttgatgacagcaacaacattcagtcatattcatcattgccagttcctgacccctcgagaaatcttattggcgatatatcattagattttgccaaattgacatcatgtgatgactttgctggttccacctctggagctccttcaaacaatggggttttgcagatgaatggggcggatggcaaagattgtctagaagctattagtgatggaatatctacagagactaggacttctttagattctcagaacatattgatttcgatgtctagccaacatatcagaaaccaagcaatctgtgagcagagtcatctttcccgcataacttactacgggtattttgatacatcacttggtcgttatttgcaagatagtttacttaatgagaaacacagctgcttatcttgtggtgaacccccagaagctcacatgtactcttacacccaccacaatggcactctaactgttcttgtgaaaagcctccccttggatgtaactctttctggtaaggatcaaggaagaatttggatgtggactaggtgtttgagatgcaatggtaagcccacccagagggttataatctcttcctctgcacgcaatctgtcatttgggaagttcttggaactcagtttctcaacacattctgctgctaagaagttatcaacatgtgggcgtttgctgcatagggactgcctacgcttctttggaatgggacccaaagttgctatgttcagatactcatctgttgaaatatattctgcctttaagccgccattgactttggagtttcataacccaaacaaaagagaatgcctggaagttgaatttaataatgtttatccgaagacatttgaccttcttgtaaaatctgggactagtgctcacgggatccttgggttgaactggctacaccagctacttcttcttggaatttacatttgggatgtccggttgcaacatattcttcaatactgtaaagctaacgctgcatcttcagacagtactatccacataaaaacaccagagaacaagccaaagaattatgaaataacttctgttcatggggatacactatgtcttaccaatgttggaatggaaaggcgggaagaacgtatcgatacttgtcattcttttgatagttcatttggcggtatgattttggagaatgagcagctaactgagaaatcagtaatccaagagcctgggtcacatgttagtccagatcatggtgaagatggtggatcacatgaagtcgacaaatatgcacatatctctgacagtttttgtttagaaaaatcaattgacttaccagttaagaatgaactaccagaactagtcagaggtaatgaaatgtatcctgttgccaagccaagcaagtgttttcatgtattcctgaacctattagatttcagtaatgatgccagaaaatggatctggggtaattttagtcacttggaaaaggagtacaagaaagagcttcagggtggctttttggacaagtttcatctcatcaacaaatacatccccaccttttcatcactggctcagcttaaatcccaaatggacatggtacagtttattgttggccctggtggtagtatcttgtccattgttgaggaagaggcatctagtatgattgcttatgcactattgatatctgagcaacaaggaatgtattcggaagctgcaattgtaaaggatgaagttattgctggtagaaaaattgataaagtaacaccaatcaactcgatcggagatactcctgtgccatctgcaattttatctccaaatgattctttagaacaagatcataacctatcaagaaatgtgtcctcgttatcatccgaggaatcaacatctgggttttatgattcttttctttctgccttaaaagatctgcatcctgaattttgtttgaataatgaaaagctaactttgaagagcaaatacactgttctgtgtatatatgcgaaacaattctacgatcttcggaagatttgttgcccatcagagattgcctatatttcatctataagccgttgtaaagaatggaatgcacaaggtggaaagagcaaggcttttttttcgaaatcaatggatgacagatttatcatcaaacaaattaagaagactgaatttgactcattcttgaagtttggccttgagtacttcaagcattttggtgtatctcaggcctcagttaaccctacatgctttgccaaaattctgggaatatatcaggttaaggaaatcaggaatggcaaggagacaaggaccaatttcatggttatggaaaattttttgtttggacgtaatataatacgaagatatgatctgaagggtgctcttttctcacgatatgttctcgactcaaaaaatcctgagaatgtgctgttggatcaaaatttcattgaagatatgcgtgctatgcctatctacattgaaggcaaaaccaagaacctcttggagcgtgctatttggaacgacacggcgtttctaagtcgcatgactgtcatggattactccttgtttgttggagtggacaaacagaagaaggaacttgtgtttggaattatagattatttgaggcaatacacctgggacaaacaattggagtcttgggtgaaaacatcactttttgttcccaagaacctatctccaactgtaatttccccgaaggagtacaagataagattcagggcatttatgtctcagtatttcctatcagttccagatgcttga</cdnaseq>

Protein Sequence

<aaseq>MDGVDDGLICSTSCYKMCGHADKSSIIDGEIGWPSMEISPCSTP YGTPLFSRESSCSSFASCFSSLDDYLVETDSEEEIEVLDTGQLHPGILFSDESMEQRK ADSVQVEEYQVSHSAVVNDDSSISIPTNQNNSSGQLQLEIHLDATNEKSVPSNAILDA NVTDPHQEVISNGGLIEACYGVPVDDIDLKQSNILDGEEITSLPMADNEMTPLDDQIM DQIDDMKEISSIVYNSTISAEQHVNSGSEFEKGNESSDNLYPLVMPSFDTDPHIWLPP DPVNKDDDTDIVANNDDNSDNNAAEGLSLSDGEADKNWLDIVASLSWRTALLVKPDAN VGNAMDPCMYVKVKCIASGSIEQSEVINGLVFKKSAAHKQMRANMKNPRLLLLQGVVG HSSAGLLSMDSMKQENDHLEKILSDVIIKCKPDAILVEKAVSRNNVLATPNLIKQCES LHFEKFIEEHNITGGGKRSAKTLLFLEGFRKPLGCTILLKGSTSEELKKVKRVLHFTV FAAYHLILETSFFADQRLFATGKNAMEKGNCLKTDPQLLVPCTAAPSSKICSDIAQNS DPTQQALNSLASDGEYVNQDDFVDPEKSVCMHDSKIETSREYADRKLDDSNNIQSYSS LPVPDPSRNLIGDISLDFAKLTSCDDFAGSTSGAPSNNGVLQMNGADGKDCLEAISDG ISTETRTSLDSQNILISMSSQHIRNQAICEQSHLSRITYYGYFDTSLGRYLQDSLLNE KHSCLSCGEPPEAHMYSYTHHNGTLTVLVKSLPLDVTLSGKDQGRIWMWTRCLRCNGK PTQRVIISSSARNLSFGKFLELSFSTHSAAKKLSTCGRLLHRDCLRFFGMGPKVAMFR YSSVEIYSAFKPPLTLEFHNPNKRECLEVEFNNVYPKTFDLLVKSGTSAHGILGLNWL HQLLLLGIYIWDVRLQHILQYCKANAASSDSTIHIKTPENKPKNYEITSVHGDTLCLT NVGMERREERIDTCHSFDSSFGGMILENEQLTEKSVIQEPGSHVSPDHGEDGGSHEVD KYAHISDSFCLEKSIDLPVKNELPELVRGNEMYPVAKPSKCFHVFLNLLDFSNDARKW IWGNFSHLEKEYKKELQGGFLDKFHLINKYIPTFSSLAQLKSQMDMVQFIVGPGGSIL SIVEEEASSMIAYALLISEQQGMYSEAAIVKDEVIAGRKIDKVTPINSIGDTPVPSAI LSPNDSLEQDHNLSRNVSSLSSEESTSGFYDSFLSALKDLHPEFCLNNEKLTLKSKYT VLCIYAKQFYDLRKICCPSEIAYISSISRCKEWNAQGGKSKAFFSKSMDDRFIIKQIK KTEFDSFLKFGLEYFKHFGVSQASVNPTCFAKILGIYQVKEIRNGKETRTNFMVMENF LFGRNIIRRYDLKGALFSRYVLDSKNPENVLLDQNFIEDMRAMPIYIEGKTKNLLERA IWNDTAFLSRMTVMDYSLFVGVDKQKKELVFGIIDYLRQYTWDKQLESWVKTSLFVPK NLSPTVISPKEYKIRFRAFMSQYFLSVPDA</aaseq>

Gene Sequence

<dnaseqindica>6447..6686#6025..6285#4515..5921#4040..4166#3635..3954#2791..3552#1856..2005#1658..1747#1414..1558#1137..1314#306..1001#1..199#atggatggggtcgatgatggccttatctgtagtacttcttgctataagatgtgtggccatgctgataaatcttcaataattgatggtgagattggttggccgagcatggaaataagcccttgcagcactccttatggcactcctctttttagccgagaaagttcttgttcaagctttgccagttgcttttcaagcctcggtgagtgtttttgcactgttctcctgtagatgaaatgctgtcattgctatcatttgcgatttttttgctagcataactaacattttttatgccatttatttcctagatgactacctagttgaaactgactctgaagaggaaattgaggtcttagatactggccaacttcatcccgggatcttattctctgatgaatcgatggagcaaagaaaagcggattctgtacaggtggaagaatatcaagtcagtcattctgctgttgttaacgatgattctagtatttccattccgacaaaccagaataattcatctggtcaactgcagttggagatacatcttgatgccaccaatgaaaaatctgttccatccaatgctattttggatgcaaatgtaacagatcctcatcaagaggtcatttccaatggtggacttatagaagcatgttatggtgtaccagtggatgatattgatctcaaacaatccaatatcttagatggtgaagagattactagccttcctatggccgacaatgaaatgactccactggatgatcaaattatggaccaaattgatgatatgaaggaaattagtagtatagtttacaacagtacaataagcgctgagcagcatgtgaattcgggttcagagtttgagaaaggaaatgaatccagtgataacctttacccgctagtaatgcccagttttgatacagaccctcacatttggttaccaccagacccagtcaataaggacgatgacactgatattgttgctaataatgatgataatagtgacaacaatggtaattgggtacagtcaagtttcaatattagctttgatgcaaagagaaacaagactagttgtgaagaccaatagctgaaagcaatgtcggaagttatgaatgggcaattcaagattcttgttactcgttttttagctgctgaagggctctctttgtctgatggagaagctgacaagaactggcttgatatcgttgcttcattatcatggcgtactgcattacttgtcaagcctgatgccaatgttggaaatgcaatggatccttgtatgtatgttaaggtgaaatgcatagcttcaggatctatcgagcaaaggtaacttaccaacattcttcctcattttgctttttttctttgcttagtcatgtacacatgccataactagctcccttttatatcttttttttttgacagtgaagtcatcaacggtcttgtttttaagaagagcgctgctcataagcagatgcgtgccaacatgaagaatcctagactgttacttctgcagggtgttgttggtcattcttctgcagggctattgtcaatggattcaatgaaacaggtgtgcatgtatgcccttagtagagcatatttacattatgtagagagttatgccatatgacataacatatacaaatttcttttcattgtcattgatcaggaaaacgatcacttggagaaaattctcagtgatgtaattatcaaatgcaaacctgatgctatattggtggagaaagcagtctcacgaaatgtaaatgaatatattcataaacaaggagtcactgtagttagtgacatgaatatccgtcggctggaaagaattgctcgttgcactggttctccaattctcttgttgcagaatgttcttgcaacacccaaccttattaaacagtgcgagtctctccattttgaaaagtttattgaggagcataatataactggaggaggaaagaggtcagccaaaactttgttatttctagaaggttttcgaaagcctttgggatgcacggtatgttgttttcctatcttgtttttagtttgtaggtcatcttttctctttatgtaggactgatcttctcatgactgggtcagagttgttctttctctgatcccttgagctgcatttagtatattttttcagtatattatttatattacataggttagccttctatgataaataatttttttctgccattttttttgacaaactgatatatataattataaaatataatcctgaccatttggaatcaacaaaaatatagtattaattaattttgaagctaatgaatttccttattgcaggcttgacatcatgatttagactgaaatgcattgaatcagataatataatcttcattgttggggttctgaatcagaatcttaccttgcatttgtctgtgttatttagtgaaattatgttgatagaacaaaccaattagctttttaaatatacttttccaccatgacattagagcttcacaccttgttaccagcttaacattggattatatcctaaagatgtattagtacagaaattgggacaaactttcacagttaggattgagtttctcatattgatattgattataatatttctttttgaagaaaaaataactttgatttgtgcgacaatgctagctaatagctatatatcatccaaattgcttttaggggctttatatgttatgcacaaatgcataagctatgaattgttacacctttgatgcactaaaccatttgtgttagtgaattgaagcaaaatctgatcagcttgaaactattttgtagattttactgaaaggatcaacaagtgaagaactgaagaaagttaagcgtgttcttcatttcactgtttttgcagcttatcatttgatccttgaaacttcattctttgctgatcaaaggttatttgcaacgggaaaaaatgccatggagaaaggcaactgtttgaaaactgatccgcagctgcttgttccttgtactgctgctccatcctccaaaatctgttctgatattgcacaaaatagtgaccccacacaacaggctttgaacagtcttgcttcggatggagagtatgttaatcaggatgattttgttgatccagagaaatccgtgtgcatgcacgattccaaaattgaaacatctagagagtatgcggacagaaaacttgatgacagcaacaacattcagtcatattcatcattgccagttcctgacccctcgagaaatcttattggcgatatatcattagattttgccaaattgacatcatgtgatgactttgctggttccacctctggagctccttcaaacaatggggttttgcagatgaatggggcggatggcaaagattgtctagaagctattagtgatggaatatctacagagactaggacttctttagattctcagaacatattgatttcgatgtctagccaacatatcagaaaccaagcaatctgtgagcagagtcatctttcccgcataacttactacgggtattttgatacatcacttggtcgttatttgcaagatagtttacttaatgaggtcatacatcttaactgcttgttgatttggtagatgcttattttatcttatgatgtttcaattgacaatatattatttgcagaaacacagctgcttatcttgtggtgaacccccagaagctcacatgtactcttacacccaccacaatggcactctaactgttcttgtgaaaagcctccccttggatgtaactctttctggtaaggatcaaggaagaatttggatgtggactaggtgtttgagatgcaatggtaagcccacccagagggttataatctcttcctctgcacgcaatctgtcatttgggaagttcttggaactcagtttctcaacacattctgctgctaagaagttatcaacatgtgggcgtttgctgcatagggactgcctacgcttctttgggtaagtgctttccaagatgctcttacctaaaggacaagtcttttcataatgacatcactaaagttacttgtttcatgacttgcagaatgggacccaaagttgctatgttcagatactcatctgttgaaatatattctgcctttaagccgccattgactttggagtttcataacccaaacaaaagagaatgcctggaagttgaatttaataatgtttgtctcattgtctccaaatatttttctgaaacatcctctttttagctaattacatattttaatcctaatatacttggttattcaaggtactttgaaaatggaggctactcttttctgaagccgaaaataaagtacaaatcttgaaatcaggggactctagtcaagccttgggagaaaacaccaaagcttcagtacatgatgaattatttttggaagtcaataggatacttgcacaagaaaaaaacgaatttgaggtaagcttgttatcagcttctattttgtcctattccttccgagaagatttggatctacttttgatatgctaacttatcttgtcaacacaaggtttatccgaagacatttgaccttcttgtaaaatctgggactagtgctcacgggatccttgggttgaactggctacaccagctacttcttcttggaatttacatttgggatgtccggttgcaacatattcttcaatactgtaaagctaacgctgcatcttcagacagtactatccacataaaaacaccagagaacaagccaaagaattatgaaataacttctgttcatggggatacactatgtcttaccaatgttggaatggaaaggcgggaagaacgtatcgatacttgtcattcttttgatagttcatttggcggtatgattttggagaatgagcagctaactgagaaatcagtaatccaagagcctgggtcacatgttagtccagatcatggtgaagatggtggatcacatgaagtcgacaaatatgcacatatctctgacagtttttgtttagaaaaatcaattgacttaccagttaagaatgaactaccagaactagtcagaggtaatgaaatgtatcctgttgccaagccaagcaagtgttttcatgtattcctgaacctattagatttcagtaatgatgccagaaaatggatctggggtaattttagtcacttggaaaaggagtacaagaaagagcttcagggtggctttttggacaagtttcatctcatcaacaaatacatccccaccttttcatcactggctcagcttaaatcccaaatggacatggtacagtttattgttggccctggtggtagtatcttgtccattgttgaggaagaggcatctagtatgattgcttatgcactattgatatctgagcaacaaggaatgtattcggaagctgcaattgtaaaggatgaagttattgctggtagaaaaattgataaagtaacaccaatcaactcgatcggagatactcctgtgccatctgcaattttatctccaaatgattctttagaacaagatcataacctatcaagaaatgtgtcctcgttatcatccgaggaatcaacatctgggttttatgattcttttctttctgccttaaaagatctgcatcctgaattttgtttgaataatgaaaagctaactttgaagagcaaatacactgttctgtgtatatatgcgaaacaattctacgatcttcggaagatttgttgcccatcagagattgcctatatttcatctataagccgttgtaaagaatggaatgcacaaggtggaaagagcaaggcttttttttcgaaatcaatggatgacagatttatcatcaaacaaattaagaagactgaatttgactcattcttgaagtttggccttgagtacttcaagcattttggtgtatctcaggcctcagttaaccctacatgctttgccaaaattctgggaatatatcaggtctgccaaaaatttgagtacttcaagcatttctcttgaatgtaataaaaaagtgttaactacttataactaatattgtaattctctctaacaaccatgtcaggttaaggaaatcaggaatggcaaggagacaaggaccaatttcatggttatggaaaattttttgtttggacgtaatataatacgaagatatgatctgaagggtgctcttttctcacgatatgttctcgactcaaaaaatcctgagaatgtgctgttggatcaaaatttcattgaagatatgcgtgctatgcctatctacattgaaggcaaaaccaagaacctcttggagcgtgctatttggaacgacacggcgtttctaagtgtatgtgtacctattgccagaaaacagatttccgctagtgtatatgcattcattttcttcataagagtatattcaggatgctagctcttcttttttttttccttttacggggacatgatgatagctctaaagtttacaatttgcatttcttttatttgcagcgcatgactgtcatggattactccttgtttgttggagtggacaaacagaagaaggaacttgtgtttggaattatagattatttgaggcaatacacctgggacaaacaattggagtcttgggtgaaaacatcactttttgttcccaagaacctatctccaactgtaatttccccgaaggagtacaagataagattcagggcatttatgtctcagtatttcctatcagttccagatgcttga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0278300, RefSeq:Os09g0278300