Os02g0815400

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Revision as of 03:00, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0815400| Description = Similar to Tfm5 protein| Version = NM_001055037.1 GI:115449584 GeneID:4331129| Length = 2692 bp| Definition = Oryza...")
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Gene Name

Os02g0815400

Description

Similar to Tfm5 protein

Version

NM_001055037.1 GI:115449584 GeneID:4331129

Length

2692 bp

Definition

Oryza sativa Japonica Group Os02g0815400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35813510..35816201

Sequence Coding Region

35813539..35813769,35813843..35813902,35814099..35814146,35814268..35814398,35814498..35814576
,35815001..35815096,35815176..35815246,35815728..35815818,35815915..35816031

Expression

GEO Profiles:Os02g0815400

Genome Context

<gbrowseImage1> name=NC_008395:35813510..35816201 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35813510..35816201 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccacggccgtcctccgccgcccactcctcgccgccgccgccgccgccgccgccgtctcctccacctcctcctccttccgcccctcccgcttccatctccggcgatgtagatacccaccccctgtattcgccgtctcctccgactccccaaagccggttacctcctcttctaccggcggtgacaaccccgacgaggagcctgtccttcccctcttgcaagaactcgcggattgcttggttctcccgcccaaattcctgtcccagcttccccgcgaccttcgcctcgatctcaatgatgcggcatttgatctctccaatgggcctgttcttgacgagtgtggccaagaggtaggtgatctgctgctcaaccttgcaaaggcatgggagatggctgacacatcgacatcaaacaaccttgtcaagcaacttccttcaatggaaccctacttgaccggcagtgccaaatcagcatttggcaagcggctgatgtcagctggaaggaggtttacgtccatgggacaatacggcaagggagagctgaagaagattgctgaaacaatgagcaaaaccggtaagctgctatcaaaacgtccagtagttcaatctgaagtagaggctatgaaagtaaaaaggaaattgaagtttttagaacttgagtttgagttgacagcagaaaaggcaaatattggagctgcagttggacttgttttcggatttctctcatggcaactagcacgtggtatacaaaacattccagacggctcaatgcagtacgcaaacgacaacgcgttgcagatggccaagtcactcaaggtctcactgcttgttcttggctacacatctactgccctctctgttttcacatcaatcgggctgctgttgctggcgcagcagatcaactctgatgacaaaacggagtag</cdnaseq>

Protein Sequence

<aaseq>MATAVLRRPLLAAAAAAAAVSSTSSSFRPSRFHLRRCRYPPPVF AVSSDSPKPVTSSSTGGDNPDEEPVLPLLQELADCLVLPPKFLSQLPRDLRLDLNDAA FDLSNGPVLDECGQEVGDLLLNLAKAWEMADTSTSNNLVKQLPSMEPYLTGSAKSAFG KRLMSAGRRFTSMGQYGKGELKKIAETMSKTGKLLSKRPVVQSEVEAMKVKRKLKFLE LEFELTAEKANIGAAVGLVFGFLSWQLARGIQNIPDGSMQYANDNALQMAKSLKVSLL VLGYTSTALSVFTSIGLLLLAQQINSDDKTE</aaseq>

Gene Sequence

<dnaseqindica>30..260#334..393#590..637#759..889#989..1067#1492..1587#1667..1737#2219..2309#2406..2522#gaggtgaaaaaaaagcagagcgttttcgaatggccacggccgtcctccgccgcccactcctcgccgccgccgccgccgccgccgccgtctcctccacctcctcctccttccgcccctcccgcttccatctccggcgatgtagatacccaccccctgtattcgccgtctcctccgactccccaaagccggttacctcctcttctaccggcggtgacaaccccgacgaggagcctgtccttcccctcttgcaagaactcgcggtgagcactctagtggcccaaatctatgtttggattcgaaagttttgaattcgcgggcgttttctctttgtaggattgcttggttctcccgcccaaattcctgtcccagcttccccgcgaccttcgcctcgatgtaagcagcgattgccctatctccgttgaattcatgcctatgttttctagtgatacgatttggctacttttttatttcaaacttagcactctcgaatagcagcaatgatgcagtgatacaaagtttaaagtgtaacttgtgaacacgagaaattctattttgggttaacaaaggtttatgtggttgtttgttgaagctcaatgatgcggcatttgatctctccaatgggcctgttcttgacgaggtaggtccgtaggtactaatgaattcgatgtccttttcaagcaagaactcgatgattattagatctatgaaggcctattctttgtatcaagaagttttcgtttttctctgtggagagatagtgtggccaagaggtaggtgatctgctgctcaaccttgcaaaggcatgggagatggctgacacatcgacatcaaacaaccttgtcaagcaacttccttcaatggaaccctacttgaccggcagtgccaaatcaggcatggattggattcatatttcttcaacagttgtgttttatgtagcatagtttcttgattgaaggatgtgtcccttgctgtttgcattacatagtgtagcatttggcaagcggctgatgtcagctggaaggaggtttacgtccatgggacaatacggcaagggagagctgaagaaggtctaggcactgaccctatccacattctatccatgctgttgttttgttgaatttgtttcggtacatttgcttattggtcactaatcatttgatcatatgttcaaacataaatcatgtagaggttagtatgttgcgattcagggcagtaggaatgttgcttccattgagcatgtaggtaaaactggttccagttcgatggaaacatctgtaatgtgggtgaattaatggcaaaaatcctacctatggaggcagaagaaaacctgtgaaattcattgtgtcatggttctctcatcgctaaattacgttacaactctgtagtcactatcggaaaatcccctctgcattgatttactgaattgtcaaaaggtatgaccacataggtatgtgtgcaaatgtaacacttctttttgttatatctctgtagattgctgaaacaatgagcaaaaccggtaagctgctatcaaaacgtccagtagttcaatctgaagtagaggctatgaaagtaaaaaggaaattgaaggtaagagcctctctgcagttaaataatggttaagggaattattctgaatgatatagttctcattcccctactttgccagtttttagaacttgagtttgagttgacagcagaaaaggcaaatattggagctgcagttggacttgttttcgggtaagagctgactcacttggcattccttctattgaaactgtgaaatatcatccacaggtctgtggatttgatatcgtcaacgcttgcccatgcatatatgttaaagaattcaccctatgatacttactaggggggacaaatctgatgtcagtgatacggttccatgctgacagatttgttttcccagcgtcaaacaccctgggggctgttagtttataccaacagatggatggtcatatttaatagttcagacatacccattccatactaagttaattctttattggttctctctgaagaaagtgctgcactcgaatagtcaaatactccctccatttttaattagatgatgtcgtcaaatataaaaagatggaggcagtagctggtttatcatatgtctcctgaggttcagtacatctaccatatatatttggaggtgaattcaagacttacagcatctcaaattcttcttgtaaaacagatttctctcatggcaactagcacgtggtatacaaaacattccagacggctcaatgcagtacgcaaacgacaacgcgttgcagatggccaaggtaacaaagcatcataaacacctgaagattgtgtagtaagttccatgtgatttctgcatcctgctaacccctgctatgctcttccatccaatgcagtcactcaaggtctcactgcttgttcttggctacacatctactgccctctctgttttcacatcaatcgggctgctgttgctggcgcagcagatcaactctgatgacaaaacggagtagctgcctaccagttgtctgaaactgtcgatgtgccattgtgtgtgctctaatcagtggatcatgatttcatgacacattcatagcgttctgttgtaccagtgtaattagcaacgcaactggataatctgtgtataaattacggaatgtttctgtacaagaattttaagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0815400, RefSeq:Os02g0815400