Os02g0817200

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Revision as of 03:00, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0817200| Description = WD-40 repeat containing protein| Version = NM_001055054.1 GI:115449652 GeneID:4331146| Length = 5541 bp| Definition...")
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Gene Name

Os02g0817200

Description

WD-40 repeat containing protein

Version

NM_001055054.1 GI:115449652 GeneID:4331146

Length

5541 bp

Definition

Oryza sativa Japonica Group Os02g0817200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35943850..35949390

Sequence Coding Region

35944189..35944247,35944336..35944394,35944479..35944585,35945105..35945165,35945406..35945491
,35945581..35945669,35946053..35946134,35946462..35946504,35946579..35946652
,35946860..35946929,35947115..35947184,35947643..35947737,35947841..35947917
,35948064..35948149,35949232..35949301

Expression

GEO Profiles:Os02g0817200

Genome Context

<gbrowseImage1> name=NC_008395:35943850..35949390 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35943850..35949390 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcggcggcgatccaccagttcgccgagtgcatcacctgccacgcgtggagccccgaccactcgatgattgccttttgtccaaacaacaatgaagtacatatctataagttttttactgacaagtgggagaaacttcatgttctttcaaagcatgatcaaatagtatctggaatagattggagtagatcttccaacaagatcgtaacggtctcacatgatagaaattcatatgtttggacacaagagggccatgattgggttcctacccttgttattctcaagctaaatcgtgcagctttatgtgtccagtggagcccaaaagaaaacaagtttgccgtaggaagtggtgctaagtctgtgtgcatttgctactatgaacaagacaacaactggtggattagcaaggttgttaggaagaagcatgaatcttctgtcactagtgttgcatggcatccaaacaatatacttcttgcaacaacatcaactgatggtaaatgcagagtgttatccactttcatcaagggtgtcgatacaaggggatcacatgcgagcacttctactgattggaaatttggagagcaaattgctcagcttgacctatcatctatgtgggcatttggtgtaaggtggtcgccaagtggaaagacactagcctatgcagggcacaattccatgatttatttcattgatgatgttgaaacgtctcctgctgcacagaatttagcactgcgtgatctgcctctccgtgatattctttttctttctgaaaggacggtgattggtgttggatttgattgcaatcctatgatcttttctgcagatgagactggactttggagctttgtcagatacttggatgaaagaaaagtaactacatcaacttcaagagcttcacagctatctgaagccttcggaaagctatatggccaatcaaagcaagtggcaagcagtgatactgttgaaccatcaaagcctcgtggtggtgttcatgagaattgcataacttgcatcgtgccattgagaaaaggaaacgacagtattgtcaaacggttcagcacgtcaggattggatggtaagattgtggtatgggatgcagaaaaccacatcgacattaaaaaatag</cdnaseq>

Protein Sequence

<aaseq>MAAAAIHQFAECITCHAWSPDHSMIAFCPNNNEVHIYKFFTDKW EKLHVLSKHDQIVSGIDWSRSSNKIVTVSHDRNSYVWTQEGHDWVPTLVILKLNRAAL CVQWSPKENKFAVGSGAKSVCICYYEQDNNWWISKVVRKKHESSVTSVAWHPNNILLA TTSTDGKCRVLSTFIKGVDTRGSHASTSTDWKFGEQIAQLDLSSMWAFGVRWSPSGKT LAYAGHNSMIYFIDDVETSPAAQNLALRDLPLRDILFLSERTVIGVGFDCNPMIFSAD ETGLWSFVRYLDERKVTTSTSRASQLSEAFGKLYGQSKQVASSDTVEPSKPRGGVHEN CITCIVPLRKGNDSIVKRFSTSGLDGKIVVWDAENHIDIKK</aaseq>

Gene Sequence

<dnaseqindica>5144..5202#4997..5055#4806..4912#4226..4286#3900..3985#3722..3810#3257..3338#2887..2929#2739..2812#2462..2531#2207..2276#1654..1748#1474..1550#1242..1327#90..159#agttccaaccatttccaccaccatcaccaccctccacctccgcctccgccacagccgcgccgcgccgctcccctccgccgccgcccgcgatggccgcggcggcgatccaccagttcgccgagtgcatcacctgccacgcgtggagccccgaccactcgagtaatcacccctcctcctgctcctcctctccttcccccctctcttctctagatctcgcgccctccgcggtgttcccgtttgattcgattctggatcgccggccatggcgtacgacgctggctacgagtgcgtgcggtcggtacgggtgggattcgcgaccacgtttttctagggtttccgcctgcaaatgtgattgagctccgtttcgaatccccccggtaggaatcggttgtcgttgctgctcatttcgtggagatgagggatgtccctctctatcttcgatccgtggtgttgctggttttggtgccagcggtggcgtttcctgctgatgtatgggtttctgtagaacaaatgccttgctaaggtggtttcggtattagggtgatactaggagacatggatcgcgtccgtaacacaagtttacatcatggatttcccctcgtaggtggggcgctatatgtaatttgaaatttactgacttggttctttgaattatgacctgaataattccatgtttcctgtgaattttacctgccactccattccctgcaccatatctgaatgggaatttcttgctacatagcgctagctcttgttctgtcatgcactggtaaatgaatgctctcatccatggtaacaaccagtacattatacatggcacccacatgattgttatggaaaatgaagtaggcttcctgcaattatatataatgttcttcagttctcctctagtgtaagcccaggttgcttgtctgctgctgatagagggatagatgaaactactgaactctgcataatgtagacttgaacagagggctatactctttcgtgctcgcttgatgtgtgctagtcccattggaggggtgagcaatacattagatttctgttcatactgaccatagatgatatattatctgcttatatggcaaaacacctactgtaatttaagaatacagcatttcttgccttgtaatatgagacactgttacatccctctagaatgatgccatttcccctttttatgatgcacatcccatgccatcttatttttaacttgacatgtaaccttttctctctttcagtgattgccttttgtccaaacaacaatgaagtacatatctataagttttttactgacaagtgggagaaacttcatgttctttcaaaggtaaatgttcttatttatattttacaagtgcgatgatcttgagcacctctctctctctctctctcatcatctttttacaatgcagtactgtataatcgatagttgattcattatcttattattttcgctattgctatatcttgcagcatgatcaaatagtatctggaatagattggagtagatcttccaacaagatcgtaacggtctcacatgatagaaattcgtaagtacacatcaagtctcaattttcttattatgaatcaccttcctattccacaagggtataaatacatgttggtctccttttttccttatatgaactgcagatatgtttggacacaagagggccatgattgggttcctacccttgttattctcaagctaaatcgtgcagctttatgtgtccagtggagcccaaaaggttctctttataacctgccttgatgcttactggcgcattggatttttctactcccgttgctgaatcaatatattctctttataaccagtgtatatgctttatagttctttactctctcagatacaaatataaatcgtgcaagcctaataaactctttcccaaatattagtcatcttagaacctctaagcactttccctctcttctttccttacccttacttaaaaactgccactacactactcatgaataattacaactgcacaagtcataacttgtaagttccttagccctaattatgctttagatgagatgttcagatgcattagtttgtcagattgtctcaaccgtgctgccatatttgttggcaacaaaatgtgtgaaaaacggatgcttataacctgaagtgcagtatcatgaagaaaacaagtttttgaagttcattttatattgtttgcagaaaacaagtttgccgtaggaagtggtgctaagtctgtgtgcatttgctactatgaacaagacaacaactggtaattgtgtctgctacctgtattagttgactgctacttttggatttccttagttttacattagctacgtcaaacattacaactgggttgtatgttttctactgatatagttcatgcaagtaggtaggttgatgtgccactcttgatatgtatttttcttaactgcctggatccttcacctataggtggattagcaaggttgttaggaagaagcatgaatcttctgtcactagtgttgcatggcatccaaacaatgtaagcgtctctctttatattgtgctttcattacagctgtgtttttctttcgttttgcttttttttcttgtacttgtgagatgcatatctcccaatcccaccactatgcaattctgcttggtttatacacgcaacatctatgtatatgcgggacctgtttttctttggaggcaatattttattttgcttgctttcgcgtttcttcagatacttcttgcaacaacatcaactgatggtaaatgcagagtgttatccactttcatcaagggtgtcgatacaaggtggaccttgctgttcttatgcctatcaggatcttctaaatattttgtttatctcatagctttttcttgaccaggggatcacatgcgagcacttctactgattggaaatttggagaggtatttgccatttcttagaccattaatgcatagtgttccactgttccttctgttggaatgaaaatgtcttacgatatatccctttgcgattttcaaatatgcctctccattttgtcaccacacaacttcttaggctaattatacattttagcatcagcatcagtgttttttttattaaatactccattaactaagaacttgagaactcattatgattcacaacccttggcaaggcatactatccttatattagctgctatagcattttttgtttcctgtcaaagtgctgatcatccttgtaacattttttctgctatgtggttgcagcaaattgctcagcttgacctatcatctatgtgggcatttggtgtaaggtggtcgccaagtggaaagacactagcctatgcaggttctccctcctacttgtttcttcatcctaagtgtgtgtttaactctctattttgcttttgtttaccacatcatctcgcatgcatcatagcctcctaccaacttatacttttacatgtgaaaggttctcttcattgtcgatatactgtggcaccttgactgacataatctagttgaacttcaattaataaaaacactagccaaggcctctgcgtagttcatcttttgtcatctccagtattttgagctccgttgagattatgacttgtttcttcaatttttatttcccacagatgggacactataccctctgatatatccacagataagataattttcaattatttacatatattgacttgtttgttattgtctgattgctagggcacaattccatgatttatttcattgatgatgttgaaacgtctcctgctgcacagaatttagcactgcgtgatctgcctctccgtgatgtgggtcagcattttcccttctgctagtatttatttgcatgctataattccatgtttcataatattgggtgaactccacaaaatttcagattctttttctttctgaaaggacggtgattggtgttggatttgattgcaatcctatgatcttttctgcagatgagactggactttggtaagcaaagatgtagatagcaaattagcaacttgttaaagtggttgcattttcctttttattccgacaatgcattgttatgagcacttgcttcttcctgttaaaaacatctgatttctagctgcctagcttcaccttaatagttaaggcactttaacctttttttcttaaaaaacatcttgtttcctaagagttccatgaccattattttaggttaatatatatgtttgtctctcataggagctttgtcagatacttggatgaaagaaaagtaactacatcaacttcaagagcttcacaggtttcctttctccctccctctcattacttcatgttagtgcaggatttcatcgtgtcattccttgctgttgtgctgttatatgcagctgctatctactatttactatgttcacaaggttctatcgtcatgtgtatttaggcgaacactatatagcgcagcccatggttggaagtacagtctattggttatataaaaaaaagtggattttcagtttacaaaaagatatttacatctctggtttcagtaattgaaatggaattatccttggttggaaaagaaaaacattcttgtcttcagcattttaaacctgaactattcaccctttattatcagtgcaacctcaagtctatatagagtatctgctcagttctttttagctgaggcagtagcattaacacaagtatcctattgatctttgccttcagttgtgaatacaataatcagaacaggtggtccatggttatttgaataacttgcgattccacaagaactaacatcagaataaaatttatgtatcagctatctgaagccttcggaaagctatatggccaatcaaagcaagtggcaagcagtgatactgttgaaccatcaaagcctcgtggtggtgttcatgagaattgcataacgtactaccctctacttccattttgcagttcaaaagcggactcttatcagttgcatatagactaataatttcgtaaatttcacagttgcatcgtgccattgagaaaaggaaacgacagtattgtcaaacggttcagcacgtcaggtttaaaacatttctatgttgacggcctaaattctccagctttatgttcaggcagtctatgttaacattctgtactccgttattgcaggattggatggtaagattgtggtatgggatgcagaaaaccacatcgacattaaaaaatagctccagggaaggtttctgatcaatcacatccaatgaacttatattgatgcatggaaacaatggcaacgagccctgcaggttttaaagatccagggctagggaggagaatgcttgttttttgttgtacctgtacacaaaccatttctttagctggctctttagcatagaggctattgggatctctataagttggcttcatttttttggggagtaactcggtcttgaattaatattgtgtaatacctgtaaaatcctagctaggcaattacataaattcgacatctcatcccaagtgtttcgcggtattctgtgtaaaataaccacacgtggaattcaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0817200, RefSeq:Os02g0817200