Os02g0819400

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Revision as of 03:01, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0819400| Description = Globin-like family protein| Version = NM_001055069.1 GI:115449712 GeneID:4331161| Length = 4838 bp| Definition = Or...")
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Gene Name

Os02g0819400

Description

Globin-like family protein

Version

NM_001055069.1 GI:115449712 GeneID:4331161

Length

4838 bp

Definition

Oryza sativa Japonica Group Os02g0819400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36057278..36062115

Sequence Coding Region

36057479..36057757,36057972..36058079,36058350..36059081,36059179..36059628

Expression

GEO Profiles:Os02g0819400

Genome Context

<gbrowseImage1> name=NC_008395:36057278..36062115 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36057278..36062115 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tacttgatatggtctgtctgtttttctcagggtagtagattgggtatcacgacagtagtttctactgattccatacgccatatgatgagaggctttacggatgagaagcaaaatcctcttctctatgcatcaacctatcatgcaggcgaatgcttagaccctgttgcagttgctcaggcaaaggcaaaacggaaggcacagaagcttgacattgtttctcatcctaataccaatgaaggcagagacgacacttcagatgataaagctcatcatggatcctccgaattgcctcctagaacggagttgatcggcagcaagcaaatggcaatagaagggttcaaggcgcaaagcgagatggtaatagacagcctggacagattaattacgtcctgggaggagcagaaacaatctgtaattgttgagggagttcatctaagcctcaattttgtgatggggctaatgaagaaacacccttccataataccatttatggtatacattgcgaatgaggagaaacacatggagcgattcgctgtacgtgcaaagtacatgacactagacccagcgaagaacagatatatcaaatacatccggaacatcagagcaatccaggactacctttgtaaccgtgcagacaagcatctggtgcccaagattaacaatactaatgttgaccagagtgtggcggccatacacgccacggttttcagctgtcttcgcaggcgagaagctggggagcagttgtatgacctcaacacaaacactgtagctgtagtgaatgaggaatacaggaaccagcgtgctgctaactcactgggttccaagggaatgtttcagttgatacaaagacagggatcttcaagaaatttgatggctatccttaatactgacggtagtgtcaccaaagcttggcatgtggataaaaacaatggcaatggaagtctcgatggtacaagcagtgacaaatcaacaaaaaatcccatgtatgatacatttgggaaggcggagccagtcaatctccagttcggatctttcgggatcagtgcatggatgagtgacacaggtggcaccagccatacaggaagtgtagatgacttgagagctgatggcattgaaacgggcggcagatattattcctcatgctgcagttcaccaaaggtgtcagattgcccttcaaaagagcttatggaggatgattattcagtttttggtagcgaagaagatgctgatgatcctcctgatgctggaactgacgaagacctaactgatgaagaaagagatatgcacgagatagaagcaggctctgttgatgaacactccaccaagtccgacgaggaatacgacgatctggcaatgcaggatgtgatggagaacggttactggtccgacgacgaacaggctgcaagcagcaccaagaactcatcgaaccaggagaagaacatccatggagcagctgatggtgatgttgttgatgatgaaggcagtggcaatgacaggtttcaccacaatctggccttcttcctgaagatgtccaagaaagtagccgccacagaactgccgtgtgcatag</cdnaseq>

Protein Sequence

<aaseq>YLIWSVCFSQGSRLGITTVVSTDSIRHMMRGFTDEKQNPLLYAS TYHAGECLDPVAVAQAKAKRKAQKLDIVSHPNTNEGRDDTSDDKAHHGSSELPPRTEL IGSKQMAIEGFKAQSEMVIDSLDRLITSWEEQKQSVIVEGVHLSLNFVMGLMKKHPSI IPFMVYIANEEKHMERFAVRAKYMTLDPAKNRYIKYIRNIRAIQDYLCNRADKHLVPK INNTNVDQSVAAIHATVFSCLRRREAGEQLYDLNTNTVAVVNEEYRNQRAANSLGSKG MFQLIQRQGSSRNLMAILNTDGSVTKAWHVDKNNGNGSLDGTSSDKSTKNPMYDTFGK AEPVNLQFGSFGISAWMSDTGGTSHTGSVDDLRADGIETGGRYYSSCCSSPKVSDCPS KELMEDDYSVFGSEEDADDPPDAGTDEDLTDEERDMHEIEAGSVDEHSTKSDEEYDDL AMQDVMENGYWSDDEQAASSTKNSSNQEKNIHGAADGDVVDDEGSGNDRFHHNLAFFL KMSKKVAATELPCA</aaseq>

Gene Sequence

<dnaseqindica>4359..4637#4037..4144#3035..3766#2488..2937#gaggtagaagaagaataaggtaggacacacacacaactccactagatttaatgacccccccttaaaattaggagaaaattaggcgaaaaacaaatccaaaagcgaagacccaagaggaagaaggttaatcaaaccaagacaagagagagagagagagaaagcaagcacagatagagagagaaacaagagagagaagaagaagaagaagaagaagggtagaagaggacgccgagagcggcagaggggtgaggccatgtgtacgccatgggcgtgcgctgcgtggacgtcgtgacacctgccgccgcccgcgcaccgccatcgccatgcccatgccgccgcaatgcgcctcctcaaaacccccttctcctcctcctcctcctcatccccacgagcacgaggtttgccaccgccgctgccgcttcttgccttgctttgatccgccgccgcgggaggcctcttcttgattcttgattttgcaggtaggggacgacatggcggaggaggcgccgccgccgccgccgccgcccaagctcctctacattgccgtctccgacgccgccgctcgccgcgccttccgctacacgcgccccgtgcttcagggcaccctccaactcatgggatgcaaggctcgccatgccttcaaggtataatacctatctatctttctatcttcttgttcatcttgatcccaacaatggaaaaactgtgcctgctctctctctctctctctctcccgcttaatttctgcctaatctggccccgatccaactggtggcgatctgattggctctctcgtgattcttccgcttcgattcgactggaaattttgctgcttctcgtatccagcgttgtgtatggtttgcacgtgctgatgtgatagatccttttgctcctttctgtgaattgcttgcttgttcttggtttaattgatagaattgcatgccgagtatagtatctggatgttgtatgttttttttttttggggggggggatggatgatcttgacaaagaaaggtgacgggttttagtgattgatgtgcagatttgttcttagctcacatccagactctctcaagtcaggtctttacacacactgctgttgatttgatcaaactctctcacatcattttcgatatctttttgcgcgagggcgttctttgcaggggaaaccggaacctttgtcaaattcgagcacccagcgcctcacttggttctgattccgcgcaatttttatgtccaaaaacccagcatatctttcaagatatgttcttgttgcatactgaacttgtcctttcggaaatatacttgtttgtgacgagtcattgtcagagatatactgccatgcaaactgttgcctagctgatgagaattactgtacctttcttggtattattatgttctatcgacaaagacaacaccatgctgtatgatgtagacctgtttgccttgcttgatctttttgccttgggcctgtagtttgatgggttgccattctagaaagtatctagcaattgacttgagttggtcatgggttcccactcggtatgcgttgttcttccctgacttggtcatggctgtttgacatctttttcctttctctgaaggcacaatttggctagctgcaaaagaaactaattgctgatgcctacttctgtagatcagactgcacaaagtgtccttttttatttctctcttgacttgtgaagataagaagtttctttttcatctttctttggcatcatcagattagcaagagggtgttcaatgtgatgaggagtgaattcttggatgcatccaaatcagatactgcagataatgaagaaaatgccccttcccttgtaaaagatgttgagatgctgaagcccaaaattttggaagcaactcttagtagcatacccttcgagttatacaagacccaaacaaccatcgttgtttctagggagaagttcctaagtgttgtatgtgatgccctctcttcatacaagtatgtggggccaaaccagaaggctgactttcttcttgcttgcaggtaacatgtttttccttgtttctgcatttataaattcagaagttacaatgagttaccaatcatcagttcattacagccaatggaaagctacctgaatgcattgaaataacaatggttttgtgcaactgtgcattttccaattgttctgttcagaattaaggagagaaaggaatcagtgacagtactcttatgtgggactagcggatgcggcaaatctacgctatcatctttgttggtatgtttatcacttacgcgaaccatacaattccggatgagtgaatgctctactgtaccagcaacatagtagtagtttgttacatgttaaagtataatgcaaaacgtctgtagaacaaaatccacttgaaaaaaaaaatcctttctagacctatcaattacctcattgctttcagaagattgtatcgcttaccgaacaatgaatgattctgggtcttgattaatacttgatatggtctgtctgtttttctcagggtagtagattgggtatcacgacagtagtttctactgattccatacgccatatgatgagaggctttacggatgagaagcaaaatcctcttctctatgcatcaacctatcatgcaggcgaatgcttagaccctgttgcagttgctcaggcaaaggcaaaacggaaggcacagaagcttgacattgtttctcatcctaataccaatgaaggcagagacgacacttcagatgataaagctcatcatggatcctccgaattgcctcctagaacggagttgatcggcagcaagcaaatggcaatagaagggttcaaggcgcaaagcgagatggtaatagacagcctggacagattaattacgtcctgggaggagcagaaacaatctgtaattgttgagggagttcatctaagcctcaattttgtggtgcgttgcgtactagttagatatttgcatcaattacttatactttgttgcatactagagaactgatgtagccttttctattttcattttccaacagatggggctaatgaagaaacacccttccataataccatttatggtatacattgcgaatgaggagaaacacatggagcgattcgctgtacgtgcaaagtacatgacactagacccagcgaagaacagatatatcaaatacatccggaacatcagagcaatccaggactacctttgtaaccgtgcagacaagcatctggtgcccaagattaacaatactaatgttgaccagagtgtggcggccatacacgccacggttttcagctgtcttcgcaggcgagaagctggggagcagttgtatgacctcaacacaaacactgtagctgtagtgaatgaggaatacaggaaccagcgtgctgctaactcactgggttccaagggaatgtttcagttgatacaaagacagggatcttcaagaaatttgatggctatccttaatactgacggtagtgtcaccaaagcttggcatgtggataaaaacaatggcaatggaagtctcgatggtacaagcagtgacaaatcaacaaaaaatcccatgtatgatacatttgggaaggcggagccagtcaatctccagttcggatctttcgggatcagtgcatggatgagtgacacaggtggcaccagccatacaggaagtgtagatgacttgagagctgatggcattgaaacgggcggcagatattattcctcatgctgcagttcaccaaaggtgtcagattgcccttcaaaagaggtatgcattggtgtgtttacagtatgataggagaaacatgctgccatcgcagacatggatctattcaatccttacatatgtttgtttcatcatttgcatttgatattccagcatatagtgcaaaaattggacgagctagcattagatgctcgtctatattcgcacgaatgttttattattaattacatgtgatacaacactgccttaacactggtttgagtagattggtgatgccataaattcgacctaacaaagaccctgacttttcagcttatggaggatgattattcagtttttggtagcgaagaagatgctgatgatcctcctgatgctggaactgacgaagacctaactgatgaagaaagagatatgcacgaggtaccaaaaaagctccctgtatgattcagcaatttcctttctagttgtgataaacacacaatatagttttcagaaactatataaaaaagaatgcaaataagaaaaaactatatccattgcagctgataattgttactaccatgctttcacttaaatgctcatggctggatttgaagaagatgctaaattcttttgcaccaatgaattcctgcagatagaagcaggctctgttgatgaacactccaccaagtccgacgaggaatacgacgatctggcaatgcaggatgtgatggagaacggttactggtccgacgacgaacaggctgcaagcagcaccaagaactcatcgaaccaggagaagaacatccatggagcagctgatggtgatgttgttgatgatgaaggcagtggcaatgacaggtttcaccacaatctggccttcttcctgaagatgtccaagaaagtagccgccacagaactgccgtgtgcatagtgcctccggtgtcaaagcaactgttgttggtccagatgtgctctgaactcggttgttatgtatcctgatgagcttacctccatgactgtaactgtaagagaggatctgctgcttgtctaagcaatacagatcacttagaatccgtgtaatccaataactcttgaaaagatgaaataataaagggtgaataaatagtttgat</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0819400, RefSeq:Os02g0819400