Os02g0822100

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Revision as of 03:01, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0822100| Description = Citrate transporter family protein| Version = NM_001055091.1 GI:115449802 GeneID:4331184| Length = 3904 bp| Definit...")
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Gene Name

Os02g0822100

Description

Citrate transporter family protein

Version

NM_001055091.1 GI:115449802 GeneID:4331184

Length

3904 bp

Definition

Oryza sativa Japonica Group Os02g0822100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36173649..36177552

Sequence Coding Region

36174277..36175410,36176147..36176336,36176918..36177186

Expression

GEO Profiles:Os02g0822100

Genome Context

<gbrowseImage1> name=NC_008395:36173649..36177552 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36173649..36177552 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatggagccgacggtgaaggtggcgctggggacggcggcgttcgggatcttctgggtgctggcggtgttcccggcggtgccattcctgccgatcgggaggacggcggggtcgctgctgggcgcgatgctgatggtgctgttcggcgtgatgtccgccgacgaggcgtacgccgccgtggacctccccatcctcggcctcctgttcggcaccatggtggtgagcgtctacctggagcgcgccgacatgttcaagcacctcgggaggctgctgtcatggcggagccagggcggcaaggacctgctcgtccgcacctgcgtcgtggcggcgctcgcgtcggcgctcttcaccaacgacacctgctgcgtcgtgctcaccgagttcatcctcaagatcgcgcggcagaacaacctcccgcccaagccgttcctcctggcgctcgcgtccagcgccaacatcggctccgccgcgacgcccatcggcaacccgcagaacctggtcatcgccgtccagagcggcatctccttcggccagttcgtgttcggcatcctcccggccaccctcgtcggcgccgtcgtcaacgccgccatcctgctctgcctctactggcgccacctctccgacgagaagtgcgtcgaggtcgtcgccccggtccccaccgacgtcgtcgaagaggaggacgtcacctcccaccgcttctcgccggcgaccatgtcacacccccgttcctcctcccaccaccaccaccaccagcagcctggcagctcgctgtcgtcgcctgactgcgaggtgttcgagccagtgaagcccgtccctgtcaccagcaatggcgactccaacaacaagccggacgccgccgacgccgccgtcgtcgtcgggatccaccagaggcgcggcggcgtcggcggcggcgtgaggatgaaggaggaacatgcgttccggtgggtggaggagaaggaggaggccatggagcaatggaagagcacggtgtggaagacgggtgtgtacgtcatcacattgagcatgctggtggcgctgctgttgggtctcaacatgtcatggagcgccatcaccgccgcactcgccctcatcgtcctcgacttcaaggatgcccgcccctgcctcgagaaggtttcctatccacttctactcttcttctgtgggatgttcatcactgtggatggattcaacaagacgggcattcctagcgcattctgggaattcatggagccctatgcacggatcgatacaccgaccgggatagtaatcctcgccctggttattcttctcctctcaaatgtggcgtcaaatgttccaactgttctcctgcttggtgctcgggtggcagcgtcagcagcggccatctcccctgcagcagagaccaatgcctggctcatcctggcctgggtcagcacggtggccggcaacctctccctccttggctccgccgcgaacttgatcgtttgcgagcaagctcgcaggtcggagcagtacggatacaccctctccttcttcagccacctccagttcggcttcccggcgacgctcatcgtcaccgggattggcctactgctcatcagaagcaactga</cdnaseq>

Protein Sequence

<aaseq>MAMEPTVKVALGTAAFGIFWVLAVFPAVPFLPIGRTAGSLLGAM LMVLFGVMSADEAYAAVDLPILGLLFGTMVVSVYLERADMFKHLGRLLSWRSQGGKDL LVRTCVVAALASALFTNDTCCVVLTEFILKIARQNNLPPKPFLLALASSANIGSAATP IGNPQNLVIAVQSGISFGQFVFGILPATLVGAVVNAAILLCLYWRHLSDEKCVEVVAP VPTDVVEEEDVTSHRFSPATMSHPRSSSHHHHHQQPGSSLSSPDCEVFEPVKPVPVTS NGDSNNKPDAADAAVVVGIHQRRGGVGGGVRMKEEHAFRWVEEKEEAMEQWKSTVWKT GVYVITLSMLVALLLGLNMSWSAITAALALIVLDFKDARPCLEKVSYPLLLFFCGMFI TVDGFNKTGIPSAFWEFMEPYARIDTPTGIVILALVILLLSNVASNVPTVLLLGARVA ASAAAISPAAETNAWLILAWVSTVAGNLSLLGSAANLIVCEQARRSEQYGYTLSFFSH LQFGFPATLIVTGIGLLLIRSN</aaseq>

Gene Sequence

<dnaseqindica>629..1762#2499..2688#3270..3538#gggtgtacacatcatcctcatcaatgagtagagagaagagtagagggtagtagagagccaaaaaaaatcgatcatggagaggccatgtggagctcgccaagtgtgagcatttaccttcttggaaagaatcccaagctagaaatccacagaattatctgctctcaaacattggctcatctgctcaacaatcctatcctcctcctcctcctcactggcagtgattcccccaaccccatttctctctgaattgggcttgtttctttgctgaattattattttgctcattccactctggttgcttgttcagagactccatgtacaattagttgaccattcttctagttagcttctcttgtgttcttggagttggagctggtctgtccatgtgagccatgttgcagattgggctagctttgggagcaagagagtggtagatcttcttcttgccagatttattgtagatacaatacaatcccatttcttgttcagatttcttggtgaaaattcctagctagatccatactttctccagtgtagtgtgtagagaagaagaggccttgtgaatcttatcttgggaaaaagaggtatatccatccacccatctgtgtgctgttcttgattggcggcaatggcgatggagccgacggtgaaggtggcgctggggacggcggcgttcgggatcttctgggtgctggcggtgttcccggcggtgccattcctgccgatcgggaggacggcggggtcgctgctgggcgcgatgctgatggtgctgttcggcgtgatgtccgccgacgaggcgtacgccgccgtggacctccccatcctcggcctcctgttcggcaccatggtggtgagcgtctacctggagcgcgccgacatgttcaagcacctcgggaggctgctgtcatggcggagccagggcggcaaggacctgctcgtccgcacctgcgtcgtggcggcgctcgcgtcggcgctcttcaccaacgacacctgctgcgtcgtgctcaccgagttcatcctcaagatcgcgcggcagaacaacctcccgcccaagccgttcctcctggcgctcgcgtccagcgccaacatcggctccgccgcgacgcccatcggcaacccgcagaacctggtcatcgccgtccagagcggcatctccttcggccagttcgtgttcggcatcctcccggccaccctcgtcggcgccgtcgtcaacgccgccatcctgctctgcctctactggcgccacctctccgacgagaagtgcgtcgaggtcgtcgccccggtccccaccgacgtcgtcgaagaggaggacgtcacctcccaccgcttctcgccggcgaccatgtcacacccccgttcctcctcccaccaccaccaccaccagcagcctggcagctcgctgtcgtcgcctgactgcgaggtgttcgagccagtgaagcccgtccctgtcaccagcaatggcgactccaacaacaagccggacgccgccgacgccgccgtcgtcgtcgggatccaccagaggcgcggcggcgtcggcggcggcgtgaggatgaaggaggaacatgcgttccggtgggtggaggagaaggaggaggccatggagcaatggaagagcacggtgtggaagacgggtgtgtacgtcatcacattgagcatgctggtggcgctgctgttgggtctcaacatgtcatggagcgccatcaccgccgcactcgccctcatcgtcctcgacttcaaggatgcccgcccctgcctcgagaaggtaattctgaattcctgatgctgaattgatgtcaaaaacgaaatttcactgaattctgatgctgaattgatgtgaaaaacgaaatttctctgaattctgatgctgaattgatgtgaaaaacgaaatttcggtacattttcagttgtttatggactgctactagtatgttcattcttgctcttattttggaaaccaatgtgttgtcgctctcactcgctctgaattctggagctgaattgacgcaggttgtatgaaaaaagaaattttggcaccttttttttccttgggtgaatttgtttacaggcaatccaatcacttcgattggtattctctgcgaaacagaagtcattactttggtatttgataatccaatcatactgaactacactaaatttgttttcagtatacaatccaatcatgtagcactatgttcttattacttctgtttttttcacatagcagtagattgccattcattttgaaacaagagtctttacttgataatccaaacatatcgaactacactgattactttgtcaagttccttgtcaccttgatgatagtactttggtcttgattttcgataacatttggttctgtcacatccctgtgttgttgctaaattgaagtaattgtgtgcaccaatggctctgctgttgtatttagtgttggttttggatacctaactgatgttaacttgagttgttaactgtagttttgctgaatgaaatttcaggtttcctatccacttctactcttcttctgtgggatgttcatcactgtggatggattcaacaagacgggcattcctagcgcattctgggaattcatggagccctatgcacggatcgatacaccgaccgggatagtaatcctcgccctggttattcttctcctctcaaatgtggcgtcaaatgttccaactggttagttctgccctctgttcatggtcaataatttcacatggcacatgtagaaattttcatccttgttgttactaatccatccagattttaaacaataactaagtcaaggaagcagcgtagacttaacgatacatgtgcttcgcactttccatgctatgcttgtcaagagtagaaaggaaagctgcttctttttttaatggaagctcacaatgccatatgtgccatggttgtctagcaatgaagcaacatatgagaggaaaagtttatctgtcatcctgcactttgcgcaattctcgcttccaaaaaaaaccagaaaatctccactaggttcactcacctactcatgatagttaatagaacaagatatcaaagaacaataggttcattttggagtctgaatttggggctggttctaaacaaagtgtgaatgtcatagctgataaccatgaagttcttatcagttaaagattgctctgtcctagtttcttccagtgaccagaaaaaaatcgtacaaaaatcagttgggcattctttcttttgatttcctgattcatgtatatacctgacaaatctcattgcagttctcctgcttggtgctcgggtggcagcgtcagcagcggccatctcccctgcagcagagaccaatgcctggctcatcctggcctgggtcagcacggtggccggcaacctctccctccttggctccgccgcgaacttgatcgtttgcgagcaagctcgcaggtcggagcagtacggatacaccctctccttcttcagccacctccagttcggcttcccggcgacgctcatcgtcaccgggattggcctactgctcatcagaagcaactgaaaaatggtacagaacatatatatgaagaagacatggatatcaggacatgtacaaaaagaatgtgaattttcaggtcaggtcgattgtatttctgcaaagattcaattgtgggataaaagaaaaatgtctatctttgcctcggaattaagcacggatatcatggtgcttggaggctttttgagctgtacatttgttagttcatattggggggagaagatgtatatgttgcagtagcaaggatcataaaagggaaatgtatatttttgttcagcattctacttgtaatccatatatattttttgaagtcgaataatttgtataggcaggagaagagaaaatcaatgaaatgcatgcccctatcgatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0822100, RefSeq:Os02g0822100