Os02g0826200

From RiceWiki
Revision as of 03:02, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0826200| Description = contains InterPro domain(s): IPR005913, IPR001509| Version = NM_001055120.1 GI:115449924 GeneID:4331215| Length = 36...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0826200

Description

contains InterPro domain(s): IPR005913, IPR001509

Version

NM_001055120.1 GI:115449924 GeneID:4331215

Length

3676 bp

Definition

Oryza sativa Japonica Group Os02g0826200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36394062..36397737

Sequence Coding Region

36394072..36394290,36395795..36395954,36396185..36396372,36396521..36396644,36396791..36396921
,36397377..36397508

Expression

GEO Profiles:Os02g0826200

Genome Context

<gbrowseImage1> name=NC_008395:36394062..36397737 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36394062..36397737 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaggaagcgtgtgctcgtcgtcgggggcagcggctacctgggccagcacctcctcgccgcgctcgctgccggcggcgaggtcgacgtcgccttcacccaccaccgcgacaccccgccgcagccgctcctgcacgcgctccccgggcttcgcgccttcagagtagacctccgctccggcgatggcctccgcgccgtctccgagtccttcggccagccgcatgtgattgtgaactgtgctgcaatctcggtacctcggcaatgcgaaacggatcctgctgctgctatggctactaatgtaccttcatcacttgtcacttggttgttaagctttgggaatgacaacactcttcttatccatctctcaacagatcaagtttacgagggagtaaaatccttctacaaagaggatgatgagaccttgccagtgaacatgtacggaaaatctaaagttgctgcagagaagtttattattgaacaatgctcaaactatgcaatcttgagaagcagtattatttatgggccacaaacaatttctcctgtggcaaaatctcttccaattcagtggatggatagtgttctttcacaaggccaacaagttcaattctttaatgatgagttccggtgtcctgtttatgtaaaagatatggtggatgtagtgttgtctttgacaaaatcatggttagcagatggtaaagctgttcaagtactcctgaatgtcggtggaccagatagagtctcaagactgcagatggctgaatctgttgctgatgttcgtggatatagtcattctataatcaaatctgtatctgcttcatcggttgaccggggtgtagcttctccaccagacatatccatggatatcaccaaactaacccaaatgcttggtatcaagccaatttcatttcaagatggagtcagagctacacttgctgcagaagctagtacatga</cdnaseq>

Protein Sequence

<aaseq>MERKRVLVVGGSGYLGQHLLAALAAGGEVDVAFTHHRDTPPQPL LHALPGLRAFRVDLRSGDGLRAVSESFGQPHVIVNCAAISVPRQCETDPAAAMATNVP SSLVTWLLSFGNDNTLLIHLSTDQVYEGVKSFYKEDDETLPVNMYGKSKVAAEKFIIE QCSNYAILRSSIIYGPQTISPVAKSLPIQWMDSVLSQGQQVQFFNDEFRCPVYVKDMV DVVLSLTKSWLADGKAVQVLLNVGGPDRVSRLQMAESVADVRGYSHSIIKSVSASSVD RGVASPPDISMDITKLTQMLGIKPISFQDGVRATLAAEAST</aaseq>

Gene Sequence

<dnaseqindica>11..229#1734..1893#2124..2311#2460..2583#2730..2860#3316..3447#agaagcagagatggagaggaagcgtgtgctcgtcgtcgggggcagcggctacctgggccagcacctcctcgccgcgctcgctgccggcggcgaggtcgacgtcgccttcacccaccaccgcgacaccccgccgcagccgctcctgcacgcgctccccgggcttcgcgccttcagagtagacctccgctccggcgatggcctccgcgccgtctccgagtccttcggccaggtacctgctctacgtttcccatttcaagttgtgatgctactgctagtcagaatgtgcgttgctacttcactctctttgcagcatggaaaatgtaatatgttcttactgcgagaatcgaatcgtttcctttcctatgaaaatccctgcaaatgtcttatgaaattgtgtagattttagaattttctagagctaatatttcaaaaggatggaacacttgacacaacgcctttgctgtatccagtttggtggaatcttgaagtgctttattactaaataaataatgtatgagacagaccgctttattccttttctaaatggagaatttagactatttaccatcaaattcacgttccttaatttttttaccacctaatccgtatgccctctataatatgtcattaggactgctaattagcctatttggtaacactttatctatttttactgtatttttcttttcttaattttatttgtatatattttcaagatttgtggacatttttaccctggacccacctgtcagatcaaagagagatactctgggtctagatcgattcgctccctccaggcgtagcgccaccgccgccgccacacgcttcttcggcgtcgcgtcaccaccgacccgctgccctgcgccaccaccgagcgccgccccaccacccccgccggcactgtgcggcagcacctccagccgccccagctattaggcagcacatggcatggaaacgtagtaatccttcacaagaacatgccatgttttccatgttccatagctagctaagctttttagctttagcagcagcatggtgagtgagtgacaagattcatcggcatggtagcatctagcgatgcatgcaaagctactaacacagtgatgtttgtgtagccacagcgccacagatcgtgcagtggggccgtcgagttggggcggcgggggcgcacagtggcgccgccggcactcggcggggtggtggcgctcggcggttggggcggagtggcgtcgagtcagctgcggcggcggcagcgctcggcgattggggcggcgagcttgcgcaccctggcggtggcagcgttctgcggcggggtggtggggcggcgccgctcgggggcggcaagctgggggcggcgctcggtggtggggcggagagctgaggcaagtggcggcggcggcgatcggcggcggggtggtcgcggtcgatggcgccgatgccggtcgggggcgttgcctggagggatcgatcgatacggagaaatatctctcttttggatctgacaggtgggcccgggggcaaaaacgtccataaatcttgaaaaatatacaaatagagttaagaaaagagaaatacgaaaaaaatagataaagtggtaccaaatagactaattaacagtcctaatgatatattatagagggcatgcggattgggtggtaaaaaagttgaggcacgcgaatttgatggtaaatagtctaaattctcttctaaatgagtttaattaccatgttcagccgcatgtgattgtgaactgtgctgcaatctcggtacctcggcaatgcgaaacggatcctgctgctgctatggctactaatgtaccttcatcacttgtcacttggttgttaagctttgggaatgacaacactcttcttatccatctctcaacagatcaaggtgcactgctctctcaactctcatccttgataatctgacgctatcgaaactcttctgcaggcattcatttttttcgtttaaaagcctagctagagacaaccgaggatcttatgaaaacccagagtttataggttacttgctaatttatgcatttgtggtctatatagtaaccagcaagtgtaggaaattccttcttttgatcttaccaagtcactctcttgtggtaccagtttacgagggagtaaaatccttctacaaagaggatgatgagaccttgccagtgaacatgtacggaaaatctaaagttgctgcagagaagtttattattgaacaatgctcaaactatgcaatcttgagaagcagtattatttatgggccacaaacaatttctcctgtggcaaaatctcttccaattcaggtatggttaaatgactaatctgcagcagctacaatacttcctccttaaagcaagttaaacttttagtcttatcatagttgtttagaaataagaactacacctcatagattggattgtctaactaaaaaagttcttcctctgtatgcagtggatggatagtgttctttcacaaggccaacaagttcaattctttaatgatgagttccggtgtcctgtttatgtaaaagatatggtggatgtagtgttgtctttgacaaaatcatggttagcaggtataaaaaggttaccacatagtgatgttattgtctttttatttgacaatttttaaaatcattatttttgcctctcgaggaacgactatttctcatttattggctccattgatgctgaggtactgacatcaaagcacatgctgcagatggtaaagctgttcaagtactcctgaatgtcggtggaccagatagagtctcaagactgcagatggctgaatctgttgctgatgttcgtggatatagtcattctataatcaaatctgtatctgcttcatcggtattaatcttctccgtgggtcacagtaatcaagaatgcatatttgcttgtcaccaactcaccgtcgaaagacatattagtatttagatactccctccgttttttaatagatgacgccgttgactttttctcacatgtttaaccattcgtcttattcaaaaaatttacataattataatttattttgttatgagttgttttattactcatagtactttaagtgtgatttatatcttatacatttgcataatttttttaataagacgaatgatcaaatatgtggggaaaaagtcaacggcgtcatctattaaaaaacggaggtagtacaatttacagttatgatgtttgcaacacaagtggaactagcctttcctaatttattgatttgttgcttgatcgatgagttcagtttaggtactatgcattgctatgactctttactatttattatccaggttgaccggggtgtagcttctccaccagacatatccatggatatcaccaaactaacccaaatgcttggtatcaagccaatttcatttcaagatggagtcagagctacacttgctgcagaagctagtacatgacactttgtctgttcattttgccaagagagctgcttggatttgtctgtgaaagtatgtgagataaagagccactttcagtttgttgaacagtggcaaatctgtgttgagtatatgtgaaagatgtaacttttcgacggtgtgaaaaaggaaattttgcgttcacccgacatcaatatcatgtattactgtctggttttatacttccgaataaaatcatcattcattttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0826200, RefSeq:Os02g0826200