Os02g0828100

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Revision as of 03:02, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0828100| Description = Conserved hypothetical protein| Version = NM_001055132.1 GI:115449974 GeneID:4331227| Length = 4234 bp| Definition ...")
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Gene Name

Os02g0828100

Description

Conserved hypothetical protein

Version

NM_001055132.1 GI:115449974 GeneID:4331227

Length

4234 bp

Definition

Oryza sativa Japonica Group Os02g0828100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36465452..36469685

Sequence Coding Region

36465876..36465901,36466008..36466164,36466424..36466513,36466997..36467095,36467355..36467421
,36467507..36467603,36467776..36467911,36468004..36468062,36468163..36468237
,36468324..36468585

Expression

GEO Profiles:Os02g0828100

Genome Context

<gbrowseImage1> name=NC_008395:36465452..36469685 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36465452..36469685 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggatgcttcaattccaagccaaacgacaccggtgcgatcagaagaagacccgggagcataggcgaggtggctgtgttcgtgcctggattgagagtacccgagagctcggatgagctgccccttcagccgctaggtgatggcctcccaaggaggctcaccgaacgcctggccgcgttgaggaatcggataattgtcatggctgctcatgaggcactgtacatgaccaagcccacctggaggatcaccatcactcagcatggggggtctaagtcagctgatcttctgcaagctttggaggattacttgcccactcttcttggcctagtaaaagatgggagcgagttggaagataaggtacagtttgcatggatgaaccaagaggatgacgcagaggatacgtcaatgcccagtgcttggtatgaggtgctatcagttctacacttgatggctctgctgcgtttgtcccaagcaaattcccttcttgttccaaagacatccattgagggataccatgctaaggtatctgaagaaaacaaacgagcttcagtggagatatttctcaaggcagccggatacttggagtgtgcaatccagcatgttctacctaagatatcgccggagaaaaggaaaggtcttcctgtggacttagctgaaggaatcctgaaagctatctgcatgcaagccctgggtcaagcaattgatgttcagcttggattggcaattgacagtccaaaggctaccttggcagtgaagaggaggctggcatgtgagatggtcaagtgctggcagcaggcacatgaaagcatttcggacctacctctgcttgatggctgggcagaaaagcacaggctctttgttacatggaaacacatcgaagcaaaagctgcggcatactactaccatggactaatccttgatgaaggaaacagtgagaaatctcataggacggcggtggcagcgctgcaatcagcggaggagttgctcaaagagagcaaagctgcatgtgaagccttccatgcggcatctcctgtttcaaggcaagcccgccgctgtggggatcgatga</cdnaseq>

Protein Sequence

<aaseq>MGCFNSKPNDTGAIRRRPGSIGEVAVFVPGLRVPESSDELPLQP LGDGLPRRLTERLAALRNRIIVMAAHEALYMTKPTWRITITQHGGSKSADLLQALEDY LPTLLGLVKDGSELEDKVQFAWMNQEDDAEDTSMPSAWYEVLSVLHLMALLRLSQANS LLVPKTSIEGYHAKVSEENKRASVEIFLKAAGYLECAIQHVLPKISPEKRKGLPVDLA EGILKAICMQALGQAIDVQLGLAIDSPKATLAVKRRLACEMVKCWQQAHESISDLPLL DGWAEKHRLFVTWKHIEAKAAAYYYHGLILDEGNSEKSHRTAVAALQSAEELLKESKA ACEAFHAASPVSRQARRCGDR</aaseq>

Gene Sequence

<dnaseqindica>3785..3810#3522..3678#3173..3262#2591..2689#2265..2331#2083..2179#1775..1910#1624..1682#1449..1523#1101..1362#ccatttcgccttcttcttcacctgggtttcgcccccataaggccggtaagcgactcctccaactccatatctagcggccaatggatttgaacttgtcgtgcttgattcccttctcttctttaatttcgctcgtccaatcccactcgatcggttttcttcactgattctttaattactccgaatcgtctcctgcccagtttttatgcggttccttcaaatattcctgaatatctccgagggcagacgcaaaaatcgatttctttgtgaccaataatagaagctgattggttctggatacagtcaaactgtccgttctaactgaaggttgactttgcaatcaggtgctaacagtttctttttattgttattattactgagaaatggaaaagtgtgagaaaaaataataaaattttcatgaatgattcatgcaaggggagaaaaagtgcgaattctagttgcaagatcgatcgttgacgtgtcgtggtagggcatgtgagcttgcagccagtactttggttgtttgatgtcgatgtgatgctcgtgactcacttaattgcttccctctcttggttggcacttaataattcactaaatcaccacagtttaattagctagcatattcagtttctttctttcttctacctcccccccatttcgctttgcaccattcatcgatctgctctctgcaagacgtggcaccttcctccttgtgttctctgacttggtaatttccatctttaaattggtcttttgtctttgagattatcatttgtaactgattaacctatgcattcgtttgcatcctagaactagctagcttctcaattcttgccagattgttattgcttgctagtgcttacaattcaatcaatcgctgcctgccatttttttagtttttattgaaagcaacactacctttcttttgctaccttattataaatgcttgtatgtatgtttgtttgtttgtttgtacacgtcttacctttcttcagtttgttaccacttctgattattattcatgtccttgcatgtagttcagctataggttgtgttcattctaactgaattcacggacagatcaagctgcaaacttgcaggagatgggatgcttcaattccaagccaaacgacaccggtgcgatcagaagaagacccgggagcataggcgaggtggctgtgttcgtgcctggattgagagtacccgagagctcggatgagctgccccttcagccgctaggtgatggcctcccaaggaggctcaccgaacgcctggccgcgttgaggaatcggataattgtcatggctgctcatgaggcactgtacatgaccaagcccacctggaggatcaccatcactcagcatggttcatccttttatggctcatcatctgatgacaagaagaataatgtcagaggtgatgaactaactgtctgaatttggtgcttgcaggggggtctaagtcagctgatcttctgcaagctttggaggattacttgcccactcttcttggcctagtaaaagatggtaaaactcctcatgtatgcttttcttccttctctttgctctttgatgaaatccaggaaatttaactgtcagtactcctggttcttcaattcttttgcagggagcgagttggaagataaggtacagtttgcatggatgaaccaagaggatgacgcagaggtctacatgctgttatgcgtactgtttgattttctgtggcaagtaagagtgatacgactgtgattaatcgtctacttatttgtgttgtgtaggatacgtcaatgcccagtgcttggtatgaggtgctatcagttctacacttgatggctctgctgcgtttgtcccaagcaaattcccttcttgttccaaagacatccattgagggataccatgctaaggtatctgaaggtctgtaccatgatcaccattgattcctcgctgatgcagaattagtacttgttacttctgaattttgaagtagtacttgttacttctgaattttcgatgatgttccttacttctcagctgttgtccgttgcagcattttgactgttctgtgtttcccttttttacttttcagaaaacaaacgagcttcagtggagatatttctcaaggcagccggatacttggagtgtgcaatccagcatgttctacctaagatatcgccggagaaaaggtggtgtgtttgatgaacaatgttgcgttctgtagttagtgcaggtcggacaggagttattgttgctgactgccatttcgtgtaggaaaggtcttcctgtggacttagctgaaggaatcctgaaagctatctgcatgcaagccctgggtcaagtaaagcgtttctccatctgcttccttttattttatttttttgggtgaatctttctttcaaatcaaatagctagaaatcacatgactcatgtaaatagcagttgaaatgtccatttctaagaccaatcgtcataattttactagtataagtcaaatgccatggctttgcgtacatgctatagttttgtggcttttacttatgtctgaagaacatcatcctgacaaaatgtccatgtcacgcggcttggtgtactgtcaggcaattgatgttcagcttggattggcaattgacagtccaaaggctaccttggcagtgaagaggaggctggcatgtgagatggtcaagtgctggcagcaggtagtacttgttttccatatcagtgctatatctgaagtagtctgttcttaagtaatgctgttattgactaagtagtaactgacaaaggcacgtgtaacacttggaagcagcttcaattgttatttgcctcatctttggttaatcttgaattgatactcctggatattcatcattatggcctcactgtgaggcactgaggctatagggattattgctactaatgatgttcaacctctgctgagatcttagtctgggttttacctgttcctcaactgaactctgaacattgtctgaacgtagctttgcagtcagtaagcaaatgtttgagttcagaaactactcctagcagcctatgaggagtcacaaatcaaacgataaatgctcctgcagtttagtttgataaatagagaatcaatattcttttctgtataatctctttcatttgatctgttcaatctttcttgtgtactatttcattttcaggcacatgaaagcatttcggacctacctctgcttgatggctgggcagaaaagcacaggctctttgttacatggaaacacatcgaagcaaaagtatgtaaaacttctttcatattctgaaacattaatactacaacgaatgatgctgtaagcacaaacaaattaatggctgtcctatacaaattaacaagaagtacattaacacatagtgtagttgtgtaaagataatttagtcatgttgcaaaaaggacggttttgttgtgagtgtgttaatttcatactccatttacactatgataaaatctatctataactgaagagaaacatatgtggatcctcctgctacaaacaggctgcggcatactactaccatggactaatccttgatgaaggaaacagtgagaaatctcataggacggcggtggcagcgctgcaatcagcggaggagttgctcaaagagagcaaagctgcatgtgaagccttccatgcggcatctcctgtttcaaggcgtgcattccattcttttcagatgtagtgttatctgcagtgagctagcttaagaatctctaagatttctgaattttggtacctgcatgcatgtgaataataatgcagaagcccgccgctgtggggatcgatgaggtatcttcaggagaagatacacaaggagtcgtcgtgcaaagttcggatcaacaaggacctctacaacaaggacaacatcatcatccatgaccatgctgacagcgcgccgccgctgccggacttcgccgtggctctcaaacccgacgagtatcgccttcctcccccactcactgacaccaattaaggatcgagtcgacaagggagaaattattaaggtccaaggcatcatgcagatgcagaggaggaagaatcaatcaaataaaatctattatgtatattcattcatattgtgccatgtatgtatgcatgggtgtcacaccgcaccacatgttgcaagaaaaatgaaagagaagctagttactactacctccatacatatatgtatgacattgactagtataaatttgaactagccaacatcat</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0828100, RefSeq:Os02g0828100