Os02g0829400

From RiceWiki
Revision as of 03:02, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0829400| Description = Conserved hypothetical protein| Version = NM_001055141.1 GI:115450008 GeneID:4331238| Length = 3500 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0829400

Description

Conserved hypothetical protein

Version

NM_001055141.1 GI:115450008 GeneID:4331238

Length

3500 bp

Definition

Oryza sativa Japonica Group Os02g0829400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36543653..36547152

Sequence Coding Region

36543653..36545056,36545184..36545623,36545709..36547152

Expression

GEO Profiles:Os02g0829400

Genome Context

<gbrowseImage1> name=NC_008395:36543653..36547152 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36543653..36547152 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaccggccgccgccgcctcccgcctccctctcgcctcaggagtgggagcagctcatcgacgatttccccaccccgcgccgccaccgatggctccacctccccctcctcgacctcgccctctcctccctcccgcgccgcgacctcccctcccacctcaggcccctcctcctctccttcctcgacgaccacctcctcccgccctcccccacccacctccccctccttctctcctccctcctctccttcccctccgaccacccgctccgggaccacctcctcctcaccgtcacatccgccttcgcctccgcgctctcccttcccgtctccaccgaccacgccgaccccctctccgccctcgtcaacgccctgctcgcctccgccaaccgccccaaccacgcacccgaccgcgccgcccgcgccctcgcctgcgacgccctgcgcgccctcgacgccgcgctcccgggcctcctcgccgacgtcctcggccacgtctacgctctcgccgccgccgagcgctcgccggccgcgcagtcctacctcctcctcctcgcctccgccgcccgccacgtcgtccgcctcggcaggctcccctccaccacctccatcttggcggtgtccggcccgcccacccccttctttgtgcccgcgcatctcctcgcacccgcaccagatcctgccaaccccgtgccgccgccttccgaggtgaatttgagggacataaggaaagtgctcgctctgatcatggacaggccgcaggtcctcacgcctgcatcgggcatggagatggcggccatccttgcagaggtgtccgcggctgtggtcgggtgggctccggcgatcgcagcgcacgtcaaggtgcagtttggcgggatggcacattcgtccagcctcatgcttctacactctctgctcacgctgttcatccagtttccagatgctttcggggccgaagacgagcgtaaaatggcacgccgtctagctttggctgcttgtgaggcacaccgcccgctcacagcgcgcttgctggcattacattggctgcttggatctggaaaattcagatatgcggtgcccggcctcgcgaaatggttttatcctggcgtgttcgacccccttgcagtcaaggccaagaagctagattgcctagctcttgttgctgctggcgttgatgctgacaagattgaaggaggcagagatgtggaccagacaattgggcttgtcgatgatggcctggcttgtgtttcagccttcaggtggctcccgggatggagtaccgagacttgtgtggcgttccgggcgctgcatgtggtcttggttgctgctgcccctcacagtactgatggctcaggttgctccggagctggtgagctcctgaattctactatcttccaccatttacaggctatgttggttgatatgacatcagaacatcgaggcttagtcccagtaattgctgatttcatcaaccgtcttctagcatgcaacactcatcggtgggcaggggagcagttgctgcaaacgcttgacgagaatctgcttccgaggcttgaaccaggctaccaactggcgtcatactacccactctttgagaagatcgcagagaatgagacagttcctcagctccgcctaatagagttgctcaccaagcagatggcttctcttgccaagaagcatgatccagagacagaactgaaaacatggtctcagggcagcaaggtcgttggcatttgtcgtgtcatgatgaagcaccatcacagctctcgcatcttctttcccctctcatgcctacttgtactcactatcaagtcctacccagacctggaggtccgggaccatgcaaggatttgtttgcggatgctgtcctgcattcctggaaagaagctgaggcatctcatgggaatcggagagcaacctgcaggtgttacaccatctcatccaggtcctttgtttgatgtcccatcaccacgtcctgctcaagatcttaagagcatgcctgatttggcgtcttacattcatcttgaaagagttgtgccactggtcgtgaaacagtcttgggccctcacattgcctaacttcagcattcagagcagagcatctggccaaattctaagtatacaggatgtaagctcaactcctccggagcaagaaaagacaccacaacctaccatcgagagaatcgcctacacacaagaagctcttcgtgtgatggattctaagggtgctgaaacactggaaatccttaggaggcactttgcatgcattcctgactacctccactcagttggtctcaaaataaaaataccttgcacatttaggttcgattcagagccattcaaccatgcttggggatccgattcagcagttccaggttctgaaggggttgatggtttgccggccctttatgcggcgacaattaacttttcatcaagtgcacagtttgggaaaattccctcatgtcatgtacctttccttctaggagaacctccaggttctggtatggacattatgcctttggataacggccaccggttagaatcaagttattgtgcttcagtagtgatagaattagagcctcgagaaccatcacctggtcttattgatgttgtcatcaccgccaacacagagaattgccaagtcatatctgggtccattcaacccattacagttggcattgaggacatgtttctgaaggccagtgtacctcctgatattctgaaagaggatgcagctgagtattaccaggatctgttccatgcgctatgggaggcctgcaacagttgttcgaacacaggtcgggagaccttccctttgacaggagggaaagggtcagctgcgattaatggaacacgatctgtcaaacttcttgaggtgactccaaaggttttgatcagagctattgaaagatacctggctcccttcgttgtcagcgttgctggagattcacttattaccatcctaagaggcaatgcaattattaaaaacgttgtgtgggaagaaagtgattcagctcctattgttggtgctgatgcattggttccatactcagtggacacaaacctttcgcttcagcgcattgatgaagacgaatttgaggttggcgcagagacttatgctcatctaagcaagagggatatgggcattgtgcgtgtcctaatatttctaccaccaaggtatcacctcctcttttcgatggaagtaggttatgcctccacattggtcagaataagaaccgatcattggccatgtttggcatatgtcgacgaatacttggaagcgttgctctaa</cdnaseq>

Protein Sequence

<aaseq>MDRPPPPPASLSPQEWEQLIDDFPTPRRHRWLHLPLLDLALSSL PRRDLPSHLRPLLLSFLDDHLLPPSPTHLPLLLSSLLSFPSDHPLRDHLLLTVTSAFA SALSLPVSTDHADPLSALVNALLASANRPNHAPDRAARALACDALRALDAALPGLLAD VLGHVYALAAAERSPAAQSYLLLLASAARHVVRLGRLPSTTSILAVSGPPTPFFVPAH LLAPAPDPANPVPPPSEVNLRDIRKVLALIMDRPQVLTPASGMEMAAILAEVSAAVVG WAPAIAAHVKVQFGGMAHSSSLMLLHSLLTLFIQFPDAFGAEDERKMARRLALAACEA HRPLTARLLALHWLLGSGKFRYAVPGLAKWFYPGVFDPLAVKAKKLDCLALVAAGVDA DKIEGGRDVDQTIGLVDDGLACVSAFRWLPGWSTETCVAFRALHVVLVAAAPHSTDGS GCSGAGELLNSTIFHHLQAMLVDMTSEHRGLVPVIADFINRLLACNTHRWAGEQLLQT LDENLLPRLEPGYQLASYYPLFEKIAENETVPQLRLIELLTKQMASLAKKHDPETELK TWSQGSKVVGICRVMMKHHHSSRIFFPLSCLLVLTIKSYPDLEVRDHARICLRMLSCI PGKKLRHLMGIGEQPAGVTPSHPGPLFDVPSPRPAQDLKSMPDLASYIHLERVVPLVV KQSWALTLPNFSIQSRASGQILSIQDVSSTPPEQEKTPQPTIERIAYTQEALRVMDSK GAETLEILRRHFACIPDYLHSVGLKIKIPCTFRFDSEPFNHAWGSDSAVPGSEGVDGL PALYAATINFSSSAQFGKIPSCHVPFLLGEPPGSGMDIMPLDNGHRLESSYCASVVIE LEPREPSPGLIDVVITANTENCQVISGSIQPITVGIEDMFLKASVPPDILKEDAAEYY QDLFHALWEACNSCSNTGRETFPLTGGKGSAAINGTRSVKLLEVTPKVLIRAIERYLA PFVVSVAGDSLITILRGNAIIKNVVWEESDSAPIVGADALVPYSVDTNLSLQRIDEDE FEVGAETYAHLSKRDMGIVRVLIFLPPRYHLLFSMEVGYASTLVRIRTDHWPCLAYVD EYLEALL</aaseq>

Gene Sequence

<dnaseqindica>1..1404#1532..1971#2057..3500#atggaccggccgccgccgcctcccgcctccctctcgcctcaggagtgggagcagctcatcgacgatttccccaccccgcgccgccaccgatggctccacctccccctcctcgacctcgccctctcctccctcccgcgccgcgacctcccctcccacctcaggcccctcctcctctccttcctcgacgaccacctcctcccgccctcccccacccacctccccctccttctctcctccctcctctccttcccctccgaccacccgctccgggaccacctcctcctcaccgtcacatccgccttcgcctccgcgctctcccttcccgtctccaccgaccacgccgaccccctctccgccctcgtcaacgccctgctcgcctccgccaaccgccccaaccacgcacccgaccgcgccgcccgcgccctcgcctgcgacgccctgcgcgccctcgacgccgcgctcccgggcctcctcgccgacgtcctcggccacgtctacgctctcgccgccgccgagcgctcgccggccgcgcagtcctacctcctcctcctcgcctccgccgcccgccacgtcgtccgcctcggcaggctcccctccaccacctccatcttggcggtgtccggcccgcccacccccttctttgtgcccgcgcatctcctcgcacccgcaccagatcctgccaaccccgtgccgccgccttccgaggtgaatttgagggacataaggaaagtgctcgctctgatcatggacaggccgcaggtcctcacgcctgcatcgggcatggagatggcggccatccttgcagaggtgtccgcggctgtggtcgggtgggctccggcgatcgcagcgcacgtcaaggtgcagtttggcgggatggcacattcgtccagcctcatgcttctacactctctgctcacgctgttcatccagtttccagatgctttcggggccgaagacgagcgtaaaatggcacgccgtctagctttggctgcttgtgaggcacaccgcccgctcacagcgcgcttgctggcattacattggctgcttggatctggaaaattcagatatgcggtgcccggcctcgcgaaatggttttatcctggcgtgttcgacccccttgcagtcaaggccaagaagctagattgcctagctcttgttgctgctggcgttgatgctgacaagattgaaggaggcagagatgtggaccagacaattgggcttgtcgatgatggcctggcttgtgtttcagccttcaggtggctcccgggatggagtaccgagacttgtgtggcgttccgggcgctgcatgtggtcttggttgctgctgcccctcacagtactgatggctcaggttgctccggagctggtgagctcctgaattctactatcttccaccatttacaggtagaaatctactgaaaggaaaattaatgatagccgcatccatcaacttggaagaaccctaattatgttccagacagtgaattgaaaatttagcaattctcaaatttctaggtcactctgtgtgcaggctatgttggttgatatgacatcagaacatcgaggcttagtcccagtaattgctgatttcatcaaccgtcttctagcatgcaacactcatcggtgggcaggggagcagttgctgcaaacgcttgacgagaatctgcttccgaggcttgaaccaggctaccaactggcgtcatactacccactctttgagaagatcgcagagaatgagacagttcctcagctccgcctaatagagttgctcaccaagcagatggcttctcttgccaagaagcatgatccagagacagaactgaaaacatggtctcagggcagcaaggtcgttggcatttgtcgtgtcatgatgaagcaccatcacagctctcgcatcttctttcccctctcatgcctacttgtactcactatcaagtcctacccagacctggaggtccgggaccatgcaaggtaggcattctgaatttctgatatttcttgttttgtgatagctgtttttctattatcttctcacttcttcaaatattacatccaggatttgtttgcggatgctgtcctgcattcctggaaagaagctgaggcatctcatgggaatcggagagcaacctgcaggtgttacaccatctcatccaggtcctttgtttgatgtcccatcaccacgtcctgctcaagatcttaagagcatgcctgatttggcgtcttacattcatcttgaaagagttgtgccactggtcgtgaaacagtcttgggccctcacattgcctaacttcagcattcagagcagagcatctggccaaattctaagtatacaggatgtaagctcaactcctccggagcaagaaaagacaccacaacctaccatcgagagaatcgcctacacacaagaagctcttcgtgtgatggattctaagggtgctgaaacactggaaatccttaggaggcactttgcatgcattcctgactacctccactcagttggtctcaaaataaaaataccttgcacatttaggttcgattcagagccattcaaccatgcttggggatccgattcagcagttccaggttctgaaggggttgatggtttgccggccctttatgcggcgacaattaacttttcatcaagtgcacagtttgggaaaattccctcatgtcatgtacctttccttctaggagaacctccaggttctggtatggacattatgcctttggataacggccaccggttagaatcaagttattgtgcttcagtagtgatagaattagagcctcgagaaccatcacctggtcttattgatgttgtcatcaccgccaacacagagaattgccaagtcatatctgggtccattcaacccattacagttggcattgaggacatgtttctgaaggccagtgtacctcctgatattctgaaagaggatgcagctgagtattaccaggatctgttccatgcgctatgggaggcctgcaacagttgttcgaacacaggtcgggagaccttccctttgacaggagggaaagggtcagctgcgattaatggaacacgatctgtcaaacttcttgaggtgactccaaaggttttgatcagagctattgaaagatacctggctcccttcgttgtcagcgttgctggagattcacttattaccatcctaagaggcaatgcaattattaaaaacgttgtgtgggaagaaagtgattcagctcctattgttggtgctgatgcattggttccatactcagtggacacaaacctttcgcttcagcgcattgatgaagacgaatttgaggttggcgcagagacttatgctcatctaagcaagagggatatgggcattgtgcgtgtcctaatatttctaccaccaaggtatcacctcctcttttcgatggaagtaggttatgcctccacattggtcagaataagaaccgatcattggccatgtttggcatatgtcgacgaatacttggaagcgttgctctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0829400, RefSeq:Os02g0829400