Os02g0829600

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Revision as of 03:02, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0829600| Description = Similar to Sperm protamine P1 (Po1) [Contains: Sperm protamine P2 (Po2) (Main protamine)]| Version = NM_001186290.1 G...")
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Gene Name

Os02g0829600

Description

Similar to Sperm protamine P1 (Po1) [Contains: Sperm protamine P2 (Po2) (Main protamine)]

Version

NM_001186290.1 GI:297721712 GeneID:9267029

Length

6802 bp

Definition

Oryza sativa Japonica Group Os02g0829600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36551790..36558591

Sequence Coding Region

36552027..36552124,36552272..36552334,36552436..36552550,36552753..36552854,36553055..36553124
,36553246..36553320,36553556..36553647,36553754..36553861,36553928..36554008
,36554096..36554139,36554226..36554448

Expression

GEO Profiles:Os02g0829600

Genome Context

<gbrowseImage1> name=NC_008395:36551790..36558591 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36551790..36558591 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgttgtgtttgctgtgacatcactacgtcagtgattgtttggatgtatgctcctgggaactcaattggactcacgataccgccatccatgtccatggcgctgagccttctcttcgccgctgcaccacgagctgttgcctcgttccgcgcctcttcggcgtcctccccggcactcgacagcggccgccgcccgcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgactgccagacctgccgctggatggcgccggaggtgttcaagagggtggacggaaaagccgccgtggccgcgcatcccatctccgacgaccacaggaccaaggccctgcaggctctgctctcctgtcctactgcctccattcacaccgagaaacctgcaaaagacattcttcaagtgcaaaacatgttccccctccccatcgacactcatcttctccctggtgtttatcattgtggttatcattctgaagactcgtttggagcaacttcttatcttataacccatccagatggaaacatactagtcgacagcccaaggtatacaacgaaactggcaaataacatcgaagaacttggtggagcacgctacatgtttttgacccacagggatgatgtagcagatcataggaagtgggctgagcggctaaaatgtgagaggattatccattcgggcgatgtagagcgtgctaccgtagatgttgagcggaaacttactggcaatggtccttggaacattggagctgatttcgaacttatccatacccctggccatacccaaggttcggtctgcttgttctacaaaccagtaaaggcgcttttcactggagatcacgttgcaaaatcagaagaatctgatgatttatatctctttcttatgtacagcaggcaaccagtgagcttgcaactggacagcatgagaaaattgttgaagttagacttcgagtggtttttacctggacatggctatcgaatccattataaagatgtacacgctaaggattcagcaatcgagtccctcatagctataactacacaagctaggggcatcttataa</cdnaseq>

Protein Sequence

<aaseq>MCCVCCDITTSVIVWMYAPGNSIGLTIPPSMSMALSLLFAAAPR AVASFRASSASSPALDSGRRPQNVPGDFFVDHRCIDCQTCRWMAPEVFKRVDGKAAVA AHPISDDHRTKALQALLSCPTASIHTEKPAKDILQVQNMFPLPIDTHLLPGVYHCGYH SEDSFGATSYLITHPDGNILVDSPRYTTKLANNIEELGGARYMFLTHRDDVADHRKWA ERLKCERIIHSGDVERATVDVERKLTGNGPWNIGADFELIHTPGHTQGSVCLFYKPVK ALFTGDHVAKSEESDDLYLFLMYSRQPVSLQLDSMRKLLKLDFEWFLPGHGYRIHYKD VHAKDSAIESLIAITTQARGIL</aaseq>

Gene Sequence

<dnaseqindica>6468..6565#6258..6320#6042..6156#5738..5839#5468..5537#5272..5346#4945..5036#4731..4838#4584..4664#4453..4496#4144..4366#tcttttgcaggcttgcaggttgaggagcactagacgctgtggagtggagggaggcggagatggcggaacagtagccaccatgagctcctcccactcccatgctcatggcggcctcctccccacctcccgccgccgctagcagcagcgggcgactcgccagggtgcgcctccacgacctggcgccctacgatggcgccgcgacccccgcctacggccgcgccgtccatgccctctccgcctccctcacccgccacggcgccgccctcctcgacctccccgacgcccacgccgccatcctccgctgcgccctccaatccgctcgcgccttcttccgcgccaacgaccaacccgccttctacctctaccgcgcagggggcagcgcaaggtttaggaattctctcttctgccttccattctgaatttctcaatctcaatcgctctcctctgaatcgcagtaggacatccgatgacggcggcggcgacctggtccctgcttgcatggacgacgccttcaggtgtttcggtgaggctgcccgcgctgctctctctgcgattgctcgccatctccgacttcgtaccaagtaagtacaaatacaatgcaatgcctgtttttttaatcccttcatctatgactagtaacatcttgctcttcacacttactcacaattgagttggtctctatacattttccagtgtattcgaccacttgctcgatgatactccattgcctgttaatgaggtctcatcctcggagttgctggtggcttattccaaccaacacctccacaccgatcatgcttcttctactgcctgtctcggctcttcagtgcctcaagttgacaggggcttccttgtgctcattgcttctgatcatccaggaattgaggtatccatgtaacaactgtgcaaagttcaattttttttaacctttattggttttagttttccttgaaatacattactgttttcttagtttatttatgctttttagctcatcttttctccctgctattctggtcgacacatttcagttttattcagtgaattagcctataagtgctgcctggcctctagttcacattgtttagctacttctctggtaggtttgtgacccaaatggccaatggtacctagcagatggcatttcagggcctggtgacctgttgcttctgactggaagggcacttagccatgttactgctggtttgcgcccaacttctcgctacaggatcacaaatgagactaggtcagtactatggtaacaactgatggtttcatcatctcatttcgcctccattttttcgtggttatatttgtatacttccctacatggatgctactgaatgatttgatatgataaacttcttattgcaatttcctttgctgttgtagagcatcactcacctttaggctaatgccacatgccaatgctatactggattgctctcctattgcagcagctgggcactgcgtaccccagatgtaccaacccatatctgcaagccaatttatggatgacttgtgtgctgaagaacgtgctgtttcgaatcattcggaagcaccttctgtgagtataaatccagtaccgcatcaattcaatagcatgcatggcatacatccatattcagctatagtgatgcatgagagaagcacacctcaactctctaagagtgggaaagtgacatgttgaaaaagcaagaggatttctgtacatgtaattgtgtctttctcatgtgcgcaaaactaccggattgctcatatcttgccaaatttggattgcaggaatctcagggcagcttcattagtgaaccatctctcagaagtgtcctatcagatccattgtcgtaagtttttccttgcggaatgtaccacttcatcaaagaagcccacgtcatatgtatagattgtcttattctgcatggatcattcttcatatgtatttacctataagttatatgctagcccccattttctttgagagagagactgggagacagagtgatagacaatcaggcacacatacaaaaatgaaggggagaaggagcacatttttacttagcttaatcaaaattgaataactgatataaacctacataaagttttgttccttttttttccaaactagtgtggatgtcatcaccatattatttagttaactacgcatcgcagtcagacaacaagcacgggtgatgaaatggtatttggtctgttgcagtggggcttttcttgaggatgctatggttctgttatgtggacactctttcggtggcctcatgctgaagaaagtcattgaaatggtattttttcaaaaaacttcatactcaggcttccagatggctattaattctcttgttgtaacttatgagggcaaagttctctcttttactgtagattgcactcttcaatgtactagcttcaactagcaattcaatttgattattgtccttaacacagatactggcattgttcactaaatttgtgttttttgtttgaaattaaattatttatttatgtcttctttattatttaatagagggccctagcggtaggttatccaaaactggaatgtactacttaacagagaactgtgactattaggactttaggagtgctttttagtagcaatggcacattcttgtaaaaaggtattttacgcctgaagcagttccttgtatttcacacagcatatatcataaaacaatagattatgtttctacaataactatgcgacatatatttaataaaagtgtattttcaagtcatttctattttacttatcttctgatccagtggggtgacaccaacaatcatgccagtttttctatttttactatgattaggcaagatgcaccatttgcaatggagaagttgatccggccaccctgtttcctaatctcggtatatttctgactactaattttcttccacgaaactggcattatctatgtctcacctgctcacgtactgctgttagtattttggatataatagctttaagagcagtagctacagtggtgaagatggaagatgataggagactctttcataatgctgctcttcgcaaacacaggaaagaggtgaccgaacgtatggatgtgctgaagagcactggaggtagcagagtacgtaatgctgtggctgtgattgtgaacataccctcaagcaatcaatggtggtgcatggatctgaataattactttcattgttttaatcagggcaatggtgagctggtgttggatgctgaaaaccctacatcacccaggggtgtgcagtatccatttgtagtgggcgagagggtcctgatcatggtacaaggagcacagttgcttttggctcttgcattactaagaaataataaagggcagaaatgaattcttatcgttaagagcatttgcagggaaacagaaggacgcctgataaatttgttgggaaggaggcagtcatcacatcgcagtgcttgaatggctggtgagtccatttggatagctcgctttgaaaaacagatggcatttttgggggtgatggaagaagatgtatgtgaagttgttgcgacttagaactaattacaaatggtgaatcgcaggtatcttgtgaaggcggttgatagcggggaaagcatacggctgcagtatcggtcgctgaagaaagtgtcggagctgcagcttcagtcagagatgaggttgcagccactcaccttcctgcacaacaaataccccagtagtggcagctgagttgattgactatcatcagtcttaaaacaaaaaaaaaagaaaggagaagcatatactgtagcagaatagtcatgaggcatgcatcgccatcaagcgtgttttgttgtagtaatactaataaaaaggtcagttagaaaagtgtggtgatagttaatctggtgatgatatgaaaagggtctatcctattggaaggagaaatgtcatgtgggggttattaaaaggacataaagagtttgctaggaagttccaaattcctagcggtggatgcagcgggtcagccaagccaaaccacaaaccaaactgacttttctactgcactgcaacgcaccagtagatgccagttggtaattcttgatccaagcgtgaaaatgtgtaactggaccggctgggcacttgcagaaaaagtcgataaatgtgttgtgtttgctgtgacatcactacgtcagtgattgtttggatgtatgctcctgggaactcaattggactcacgataccgccatccatgtccatggcgctgagccttctcttcgccgctgcaccacgagctgttgcctcgttccgcgcctcttcggcgtcctccccggcactcgacagcggccgccgcccgcagaacgtccccggcgacttcttcgtcggtcagccctgcacctaaactcatcattaatcgctcgccatttatgcgctgcttcagttgaatttgtaattcgctgtctggctgcagatcaccgatgcatcgactgccagacctgccgctggatggcgccggtaactagtctttcatatatgcataatatgcttgatgcttcagctgctttgcttggtgatggtgatttgaattgaattgaattgcaggaggtgttcaagagggtggacggaaaagccgccgtggccgcgcatcccatctccgacgaccacaggaccaaggccctgcaggtagctctgcctctcttttactgaatttcaatgcaaaattaaactatgcctgccattgatgcccaggctctgctctcctgtcctactgcctccattcacaccgagaaacctgcaaaagacattcttcaagtgcaaaacatgttccccctccccatcgacactcatcttctccctgtatgacttgctctcctcattccggatttcacccaatttatctcaattaaattaatactctcatgttatatatgtcatccatcctgcactgctcaaatctttccagggtgtttatcattgtggttatcattctgaagactcgtttggagcaacttcttatcttataacccatccagatggaaacatactagtcgacaggtagattccaatgcacttactaaattgtttatatccctagtacccatcttgccatggccagacaaacaacttatcaagttccaatcggatacattgatagttttccttctgacaagtattcaatttcacaaattggtagcatttttcacaaattggagatcatctctagcaagtcttcttgtccagcttacatgtggttatcagtaggtcttctgatatttttctgattttctagcccaaggtatacaacgaaactggcaaataacatcgaagaacttggtggagcacgctacatgtttttgacccacaggtatgtttgaactaaaagttgtataacatgtttatctattttttgtttttctgaatgcgccgcttctttattttaaatattttatttggatattgaatagcgtctaatgagttacttacagggatgatgtagcagatcataggaagtgggctgagcggctaaaatgtgagaggattatccattcgggcgatgtaagaccctcatgcaaacgattgcatctttttgtagcaaattttacctatagttcataacttgaagtacgtagaggacaattattcatagtttgcactacatgtactagtgtagagtctagcttacctatttttccagcgagttttgctctcagatgcctctcctgatattctttactgcaattaccatgctcatgcaggtagagcgtgctaccgtagatgttgagcggaaacttactggcaatggtccttggaacattggagctgatttcgaacttatccatacccctggccatacccaagtaagaagttcaacttaatgaaataagttgtttaagcaattacttgttgccttcagtatggaaggcttctctggattgggtgaaacattcttaaacatagaacactaaagagtagcagggtgaaagatatgtgcgctgttgttggacattaagagcattttttttcagggttcattcattaaaatgagcatttttttttcagggttcggtctgcttgttctacaaaccagtaaaggcgcttttcactggagatcacgttgcaaaatcagaagaatctgatgatttatatctctttcttatgtacagcaggcaaccaggtagaatcctccctagattttgtctaactggacataactgtgcaattgtacaattagcttacaaatcggattaataatctatctattgcataaatttgcagtgagcttgcaactggacagcatgagaaaattgttgaagttagacttcgagtggtttttacctggtatgcgctcattcaagcattgcggatagagtataccttcttaggaaatgagaaagtccctgccttagcatttagtttctgttgttttctttaaaacggcatgattgagtcactgaacactgattgctagttttttcccttttccaggacatggctatcgaatccattataaagatgtacacgctaaggattcagcaatcgagtccctcatagctataactacacaagctaggggcatcttataattctctctaccttcagacttcagtgtacataaataacgatcaattctggaattaagtgaccaagaggaaatgtacttttttttgaaagaccagcgtaggcggctggcattctatttatcttagaaggagcaatgtacaaattggcgatataggaaatgtaaaaatttacacccatgatggcaaacaggtttgtcaccatgtctatgatcttctctaaatcttggtacctcccatgct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0829600, RefSeq:Os02g0829600