Os02g0831600

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Revision as of 03:02, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0831600| Description = AGO1 homologous protein| Version = NM_001055156.1 GI:115450039 GeneID:4331253| Length = 7057 bp| Definition = Oryza...")
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Gene Name

Os02g0831600

Description

AGO1 homologous protein

Version

NM_001055156.1 GI:115450039 GeneID:4331253

Length

7057 bp

Definition

Oryza sativa Japonica Group Os02g0831600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36648193..36655249

Sequence Coding Region

36648444..36648658,36648745..36648776,36648858..36648952,36649038..36649111,36649219..36649354
,36649440..36649503,36649701..36649763,36649882..36650024,36650120..36650257
,36650341..36650462,36650578..36650742,36650897..36651020,36651356..36651427
,36651609..36651716,36651814..36651930,36652087..36652216,36652332..36652438
,36653264..36653373,36653670..36653803,36653896..36654045,36654142..36654350
,36654436..36654963

Expression

GEO Profiles:Os02g0831600

Genome Context

<gbrowseImage1> name=NC_008395:36648193..36655249 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36648193..36655249 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcacggaggccaacgcaccgccaccataccgaggctccagatcctggtggaagagggagagggagaggccgtgccgcccgatatgctcagcctcagcctcagcctcagcagcagcagcagcagcaaggacgaggatgccgtgctagaggtgcctcgccgccgccgccgccgcagcagcagcagcagcaacagccaaggtctactcctactcgtgctaccactgtcaccgtggcttcctcttcatctaccacggccaccgcatcatcaagccctctagctcccgagctgcgccaagcaataatggaagctccccgtcccagtgagctcgctcaaccctcacccactccgcctcaggaacaacctgtggatgccgctaccacgacgccgcaccatattccatcctcaagcaagtcaattaggtttcctttgcgcccggggaagggtaccattggcaccaggtgcatggtcaaggccaatcatttcttcgctcacctgcccaacaaggatcttcatcactacgatgtctccatcactccagaagttacatcacgcattgttaaccgagctgtgatcaaggagctggtaaatctgtacaaggcatcttatctgggtgggaggctgcctgcatatgatggtagaaagagcttatacacggctggcccattgccgtttacttcacaggagtttcagatcactttacttgacgacgatgatggttctggttctgagaggcgacagaggactttccgagtagtaatcaagttcgccgcacgggccgaccttcaccggcttgagttgtttttagctgggaggcacgcagaagctccacaggaggcactgcaagttcttgatattgtgctgcgagagctaccatcagcaagatatgcgccatttggacgttccttcttttcgccttacttgggtaggaggcaaccccttggtgagggattggaaagctggcgtggattttaccagagcattcggcctactcagatgggcttatcactgaatattgatatgtcagctacagctttcattgagccgttacctgttattgattttgttgcacaactattgaattctgacatccattcaaggccgctttctgatgccgaacgtgttaagatcaagaaagccttgagaggagtaaaggtggaagttacccaccgtggcaacatgaggcggaagtaccggatatctggtttgacaattcagccaactcgtgagctaacttttcctgttgatgaaggaggcacagtgaagtcagttgtacagtactttcaagagacatatggctttgccatccaacacacctaccttccatgccttacagttcagcgattaaattacctgcctatggaggtctgcaaaatagtggaaggacagagatactccaagagattaaatcagaatcagataagagctcttttggaggagacatgccaacacccacgtgatcgggagcgtgatattattaagatggttaaacataacgcttatcaggatgatccttacgcaaaagagtttggcattaagataagtgatcgtctggcatcagtagaggcacgaattttaccggctccacggcttaagtacaatgagactggtcgagagaaggattgcttaccaagagttggtcaatggaatatgatgaacaagaaaatggtaaatggtggtaaagtcagaagctggatgtgcgtcaattttgcccgtaatgtgcaggaaagtgttgttcgtgggttctgccatgaacttgctctgatgtgtcaagcctcaggaatggatttcgctccagaacctattcttccaccactaaatgcacatccagatcaagtggagcgtgctctaaaagctaggtatcatgatgcaatgaacgttcttggaccccagcgcagggaacttgatttgcttattgggatactacctgataacaatggctcgctttatggtgatttgaagcgcgtgtgtgaaatagatcttggaatagtttcacaatgctgttgcacgaagcaggtgttcaaaatgaacaaacaaattcttgcaaatcttgctctgaagataaatgtcaaggttgggggcaggaacactgtgctggtggatgctgtgtcaaggcgtattcctctggtaaccgacagacctacaattatatttggtgctgatgttacccatcctcatcctggagaggacagcagtccctcaattgctgctgttgtagcctcccaagattggcctgaggtgacaaagtatgctgggttggtttctgctcaagcccaccgacaagagctgatagaagatctatataaaatctggcaggatccacagagaggaacagttagtggtggcatgatccgtgagctgcttatatccttcaaaagatcaactggtgagaagccccagcgaataatattttacagggatggcgttagtgaaggccaattttaccaagttctactttatgaattgaatgcaatccgaaaagcatgtgcctccctggagacaaattaccaaccaaaggtgactttcattgtggttcagaaacgtcaccacacaagattatttgcacataatcacaacgatcagaactcagttgacaggagcgggaacatactccctggtacggttgtagattcaaagatctgtcatccaactgagtttgacttctacctgtgtagccatgctggcattaagggtactagtcgtccagctcattatcatgtcttgtgggatgaaaacaacttcacagctgatgcattgcagattcttaccaacaacctttgctacacctatgcaaggtgcactcgctctgtatcaattgttccacctgcttattatgctcatctggctgccttccgtgctcgtttctatatggaaccagatacatctgacagcagctctgtcgttagtgggcctggtgtacgtgggccactttctggctcatcaacatcacgtactcgggcccctggtggtgcagctgttaagccacttcctgctctgaaggatagtgtgaagagggtcatgttctactgctga</cdnaseq>

Protein Sequence

<aaseq>MASRRPTHRHHTEAPDPGGRGRGRGRAARYAQPQPQPQQQQQQQ GRGCRARGASPPPPPQQQQQQQPRSTPTRATTVTVASSSSTTATASSSPLAPELRQAI MEAPRPSELAQPSPTPPQEQPVDAATTTPHHIPSSSKSIRFPLRPGKGTIGTRCMVKA NHFFAHLPNKDLHHYDVSITPEVTSRIVNRAVIKELVNLYKASYLGGRLPAYDGRKSL YTAGPLPFTSQEFQITLLDDDDGSGSERRQRTFRVVIKFAARADLHRLELFLAGRHAE APQEALQVLDIVLRELPSARYAPFGRSFFSPYLGRRQPLGEGLESWRGFYQSIRPTQM GLSLNIDMSATAFIEPLPVIDFVAQLLNSDIHSRPLSDAERVKIKKALRGVKVEVTHR GNMRRKYRISGLTIQPTRELTFPVDEGGTVKSVVQYFQETYGFAIQHTYLPCLTVQRL NYLPMEVCKIVEGQRYSKRLNQNQIRALLEETCQHPRDRERDIIKMVKHNAYQDDPYA KEFGIKISDRLASVEARILPAPRLKYNETGREKDCLPRVGQWNMMNKKMVNGGKVRSW MCVNFARNVQESVVRGFCHELALMCQASGMDFAPEPILPPLNAHPDQVERALKARYHD AMNVLGPQRRELDLLIGILPDNNGSLYGDLKRVCEIDLGIVSQCCCTKQVFKMNKQIL ANLALKINVKVGGRNTVLVDAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVV ASQDWPEVTKYAGLVSAQAHRQELIEDLYKIWQDPQRGTVSGGMIRELLISFKRSTGE KPQRIIFYRDGVSEGQFYQVLLYELNAIRKACASLETNYQPKVTFIVVQKRHHTRLFA HNHNDQNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENN FTADALQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSSSVVSGP GVRGPLSGSSTSRTRAPGGAAVKPLPALKDSVKRVMFYC</aaseq>

Gene Sequence

<dnaseqindica>6592..6806#6474..6505#6298..6392#6139..6212#5896..6031#5747..5810#5487..5549#5226..5368#4993..5130#4788..4909#4508..4672#4230..4353#3823..3894#3534..3641#3320..3436#3034..3163#2812..2918#1877..1986#1447..1580#1205..1354#900..1108#287..814#gtcttcttccttcctcggcccggcctcgctcgctgcctgccagctgcagctgcaactctccatccatcgatcgatctcctcctactcccccgccgccgccccgtccaagacaagccaaggtatgccaatccattcctacctactactacctcctcctcagcttcactcactagtctatctaatctcccctagtgagactgagactcgcttgccatttctgttcctgtgctaaattgctaagctacgggtagtgtcttgtgcagccagccaccactccctgcatgccatggcctcacggaggccaacgcaccgccaccataccgaggctccagatcctggtggaagagggagagggagaggccgtgccgcccgatatgctcagcctcagcctcagcctcagcagcagcagcagcagcaaggacgaggatgccgtgctagaggtgcctcgccgccgccgccgccgcagcagcagcagcagcaacagccaaggtctactcctactcgtgctaccactgtcaccgtggcttcctcttcatctaccacggccaccgcatcatcaagccctctagctcccgagctgcgccaagcaataatggaagctccccgtcccagtgagctcgctcaaccctcacccactccgcctcaggaacaacctgtggatgccgctaccacgacgccgcaccatattccatcctcaagcaagtcaattaggtttcctttgcgcccggggaagggtaccattggcaccaggtgcatggtcaaggccaatcatttcttcgctcacctgcccaacaaggatcttcatcactacgatgtgtgttctcttccccggcccccccctcaaacccactcatttttagctggagttttgctctactaatctgtctgattttcgacaggtctccatcactccagaagttacatcacgcattgttaaccgagctgtgatcaaggagctggtaaatctgtacaaggcatcttatctgggtgggaggctgcctgcatatgatggtagaaagagcttatacacggctggcccattgccgtttacttcacaggagtttcagatcactttacttgacgacgatgatggttctggttctgagaggtcgcctgctcactttgcctcacctcccgcacttgtacaaaagcaacagtattatgtggccaatcttgctgacttagttgttttcttttcatttaggcgacagaggactttccgagtagtaatcaagttcgccgcacgggccgaccttcaccggcttgagttgtttttagctgggaggcacgcagaagctccacaggaggcactgcaagttcttgatattgtgctgcgagagctaccatcagcaaggtacctacgaggttcttatgccacttattatatctaacacaagacatttaagaaacagaggtttgacattttctcattttggtggttcacagatatgcgccatttggacgttccttcttttcgccttacttgggtaggaggcaaccccttggtgagggattggaaagctggcgtggattttaccagagcattcggcctactcagatgggcttatcactgaatattggtaaatctctctctctctctctctctctgatgtgtgcatgcatagctgaaatgtaagtcatattctttgttctattgcatgaacaagtgagcaagaagaaagagatagtgcataggtctcagtactttttagatttgagtgctattttttgtttcacgattgcaattacattcctattttcaactggaattgttatgtgattcacttacatcaaatttatatgtttcatttgggataaatgcatttaatgtccttgatgattcttgtgccatattgagcatttgtaccttttccagatatgtcagctacagctttcattgagccgttacctgttattgattttgttgcacaactattgaattctgacatccattcaaggccgctttctgatgccgaacgtgttaaggtgctcttactaaacttacttttcgtgtgactgtctcatctgttagcaagggccaattctcaaatgaaatttacacattcttttttttttaaaagaaagacatgtagatctcttgagctatgttctatttttccctcaaaacttgtatgtcttgtcccactttcctgtctatcttagtgggaggtttgtttctccttatagatgcaactcattaatctttatgctatttaatgagctggctaatgctcccgcattgagatatttcataaaaaaatgacgagattatatattcctaaaaaaatagcattcttattgtatttattgtgatgatcggggcattgtgatttttagttctctcatatcatccgtacttgacaataagattatatctatttctgacaatgtacatgaggattgtacaacataaaatcaccttgccttccaaaaggaaagatagagatacttgtgataccagtataccacacagtaattgtattgggcctacaatcattaattggttagcagtgtaagagtgttgcttgtctgtcccatgtaatagtactctactctatatattgcacctttgggcttttgctggaacgcatgaagtccctttttttcctggcagctcaaggaatttttttaagttcttttaaaacaagaaatgcagtagaggttacaagaagtcgggaacttcagtttgggattttttacactttattttgcttttcctggttgacattgacttctctaaagttttcctttcagaatgtatgtatgctttaacaatttaatctctatgctcccactgtattgaaacactagatcaagaaagccttgagaggagtaaaggtggaagttacccaccgtggcaacatgaggcggaagtaccggatatctggtttgacaattcagccaactcgtgagctaacgtatgatttctaatctgtgtgttttaccaagtaatctctaaggtattcatagaaaaggccctgtgatgctactttcgtatgctctgaaaaaaatatgttgttctccttgtggcagttttcctgttgatgaaggaggcacagtgaagtcagttgtacagtactttcaagagacatatggctttgccatccaacacacctaccttccatgccttacagttcagcgattaaattacctgcctatggaggtaatgtagtggtgaacctttgttgccttttgttgtaatgaatttctacaacactggcccaactttacattttccatgttcatattgaaaatataataccaaacactggtgctgttcaattttggattcacggtgattgcgactgaatttaaccaggtctgcaaaatagtggaaggacagagatactccaagagattaaatcagaatcagataagagctcttttggaggagacatgccaacacccacgtgatcgggagcgtgatattattaaggcatgaaatttgttatcacgtcttagtggtgcaatattgtgtgcgtgattaatgtttaacataattctcaatttctctggtttgggatggtacacagatggttaaacataacgcttatcaggatgatccttacgcaaaagagtttggcattaagataagtgatcgtctggcatcagtagaggcacgaattttaccggctccacgggtaggttgactatggctttgttgaggctttgttgattttgatgtactttcttgttatacccttcttgtcctttctaactgtattgtggatacagcaaaaaaaagggatgcaattaacattttctcctatatacttgtagccttacaaatatgtttttttgttatattttcttgtgatgcagcttaagtacaatgagactggtcgagagaaggattgcttaccaagagttggtcaatggaatatgatgaacaaggtaaccacatgaacattctgttgtccagcaaccatccatttattggcacaaaggctagagtagaaaaggggctaatattggatattcttcttaattatctgagaagctatttacttagttgtaactatagcatgcatggtaactatgacgtgtcatgcaaattaatgtggaaactcccatgcaatattcttgttagttctttatttaggtccatagaactggataacattacagactaactttaagtactctctttagattcattaatcaaacaaattagtagatttgtttattctgaccacatacttaatgtcccttttcatttttctatgcagaaaatggtaaatggtggtaaagtcagaagctggatgtgcgtcaattttgcccgtaatgtgcaggaaagtgttgttcgtgggttctgccatgaacttgctctgatgtgtcaagcctcaggaatggcaagtatccttgaaatgcttcctgcaaaactctcatttgagcatgagcaaagcacaccaagatccatatataaaattttcaacatgaattctaagatttgtacttcatattaaccatttacaataataacagtgtaatgcatcattgtaataggatttcgctccagaacctattcttccaccactaaatgcacatccagatcaagtggagcgtgctctaaaagctaggtatcatgatgcaatgaacgttcttggaccccagcgcagggaacttgatttgcttattgggatactacctgataacaatggctcgctttatggtatgtctgtctgataatcagaatccttgtagtttgcatctgataacaaagagttgttggattctcactagtattgtgcatgtgattctttatcaattttttttctctctataaggtgatttgaagcgcgtgtgtgaaatagatcttggaatagtttcacaatgctgttgcacgaagcaggtgttcaaaatgaacaaacaaattcttgcaaatcttgctctgaagataaatgtcaaggttaaagcaatccatttacgccttttcgctgcaatttgtatttcttctatgttattgaatttttcatcatttaattttgcaaggttgggggcaggaacactgtgctggtggatgctgtgtcaaggcgtattcctctggtaaccgacagacctacaattatatttggtgctgatgttacccatcctcatcctggagaggacagcagtccctcaattgctgctgtaagtagaatatcgcctgtgacctgttcctgaattttttttccctggagggtaataatttactctgcctacgctaactatatatcgttttgcaggttgtagcctcccaagattggcctgaggtgacaaagtatgctgggttggtttctgctcaagcccaccgacaagagctgatagaagatctatataaaatctggcaggatccacagagaggaacagttagtggtggcatgatccggtatgctactcagtattttttagtagttctttccttaagaacttcacagatagttcttcatttttaaaataacatgatattaaagcccattttatatttatattgccaaaaaatgcagtgagctgcttatatccttcaaaagatcaactggtgagaagccccagcgaataatattttacaggtatctaccctttaggaggaacaattagactttctatgatttatagatttggaaatattatatgtgctatatccatgatttctgttggatcttttgaaacatagcaacatgttgaatttgctagaggggacatctcttccactgaacaggaaacaatcataattccactaaagccggatcttgttttcttttgtcagggatggcgttagtgaaggccaattttaccaagttctactttatgaattgaatgcaatccgaaaagtaaaagtttgccagatcctgtatccttccctcttttttcatattccatgtaaccattaaattctgatgtccttgttttactcaggcatgtgcctccctggagacaaattaccaaccaaaggtgactttcattgtggttcagaaacgtcaccacacaagattatttgcacataatcacaacgatcagaactcagttgacaggagcgggaacatactccctggtagatcttatgaataactccaacaacatattgctttacattttcaccaatgatcttttttctgttggttaattggttacttttttctccatgctctatacttgaaggtacggttgtagattcaaagatctgtcatccaactgagtttgacttctacctgtgtagccatgctggcattaaggtaatcccaggaattgcttggattctgattttgttttgtatttctacgagtcttaacaaataaggtacaacatcctgctctccagggtactagtcgtccagctcattatcatgtcttgtgggatgaaaacaacttcacagctgatgcattgcagattcttaccaacaacctttgctacacgtaagcatgccctttttttctgaccacctggtgaactttatatagaaagttagtttctaacttccatcattttttctgcagctatgcaaggtgcactcgctctgtatcaattggttagttatcttcttctggggatagttttctcaaaattccagcgactcatctcctggctaatatctttctaatccttccattgcagttccacctgcttattatgctcatctggctgccttccgtgctcgtttctatatggaaccagatacatctgacagcagctctgtcgttagtgggcctggtgtacgtgggccactttctggctcatcaacatcacgtactcgggcccctggtggtgcagctgttaagccacttcctgctctgaaggatagtgtgaagagggtcatgttctactgctgaagctagggcctacatagctaaagctcttcgtttcttggcaacctgcctatgatggttgtaattatgtgtcaaaaaatcccataataatctgccagctgctatcttctccattgtactatgctggtcatgtttgccaaagttaccctatatgtatgtatattatgctattgttttttttttttgcggggactattgttatcatgtattatgttttactgtcatgtctgtagttatgattcgaggagtttgcg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0831600, RefSeq:Os02g0831600