Os10g0457400

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Revision as of 08:40, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0457400| Description = Conserved hypothetical protein| Version = NM_001071297.1 GI:115482337 GeneID:4348802| Length = 2145 bp| Definition ...")
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Gene Name

Os10g0457400

Description

Conserved hypothetical protein

Version

NM_001071297.1 GI:115482337 GeneID:4348802

Length

2145 bp

Definition

Oryza sativa Japonica Group Os10g0457400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17224056..17226200

Sequence Coding Region

17224151..17224427,17224525..17224564,17224687..17224774,17224903..17224926,17225040..17225108
,17225212..17225434,17225525..17225591,17225681..17225948

Expression

GEO Profiles:Os10g0457400

Genome Context

<gbrowseImage1> name=NC_008403:17224056..17226200 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:17224056..17226200 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagttcgccgtccctgtcccccagcaggtctccagcctggcgctgccggtggtggtggcggaggcggaggcggccgccgccgccgctgctgctccggggaggaggggggcagcgggcggcgtgagctcgataccgaagggcgctggggctgccgcgaggaggaagacgctgtgcgacatcaccaacctgaggccgcggccggcggcggccgtggagcaggacggggcgacgtgtgccgcggacgcgggcggagtcgcgcaggcgcagcttgtcaaggagaactcggaacttgtgaggctcctcgaggagagggacaagatcatagagttgagtgggacagagttgcagaagttgcggctcgctaactggcagctcgcgcaggcaaattcccagatgctggcagagctcaaccttgggagagataggctaaaaaagctgcaacatcaactcgcttgctcgagagctgttatcgcaacaaaaacatcagaattggaggaggccaagaaggcgatgaagcgcaataggaacctgccactgccagagaaggctcctcctgcaagcgaaacggcgcagcagcagcagggttctgatagagcggcacagatcaaggatggagatgtcgtcaatccagagcccgccgcggcttcagacgcatcgcatgcggcaagcaccaagaaactcagcaacgccagcaggaaacggatgcaaagatctcgatctctaggaccagctgcaacgacgaaactagcagcgacaccaaaggagaaggagaatgtgcagagaaggaagtccatgagaacaccggtaccacagccgagcgagcatagggaggacctgttcgagatcgaggacctccagctcgcgatcggcggcggtggcggcggcggcgacagcaaggccgggaccagtgaccctcctgagcaagcggcggtggcggtggcggcggctcagttcccgcggaggtcgtcgctggggaggccgatcaggagggccacggagagggtggcctcctacaaggagatgcctgtcaacattaagctcaggaggtcctag</cdnaseq>

Protein Sequence

<aaseq>MEFAVPVPQQVSSLALPVVVAEAEAAAAAAAAPGRRGAAGGVSS IPKGAGAAARRKTLCDITNLRPRPAAAVEQDGATCAADAGGVAQAQLVKENSELVRLL EERDKIIELSGTELQKLRLANWQLAQANSQMLAELNLGRDRLKKLQHQLACSRAVIAT KTSELEEAKKAMKRNRNLPLPEKAPPASETAQQQQGSDRAAQIKDGDVVNPEPAAASD ASHAASTKKLSNASRKRMQRSRSLGPAATTKLAATPKEKENVQRRKSMRTPVPQPSEH REDLFEIEDLQLAIGGGGGGGDSKAGTSDPPEQAAVAVAAAQFPRRSSLGRPIRRATE RVASYKEMPVNIKLRRS</aaseq>

Gene Sequence

<dnaseqindica>96..372#470..509#632..719#848..871#985..1053#1157..1379#1470..1536#1626..1893#gttacgctttccccttcctccttccgcctcccacccacccaaaacctaaccccaaaaatcccccaatctctctcgcctgctcgatcccccaatccatggagttcgccgtccctgtcccccagcaggtctccagcctggcgctgccggtggtggtggcggaggcggaggcggccgccgccgccgctgctgctccggggaggaggggggcagcgggcggcgtgagctcgataccgaagggcgctggggctgccgcgaggaggaagacgctgtgcgacatcaccaacctgaggccgcggccggcggcggccgtggagcaggacggggcgacgtgtgccgcggacgcgggcggagtcgcgcaggcgcagcttgtcaaggcaagatcgccgatcctgtgcttgccagtttgaaaatctcggggtcgttcgctaacggtgatgttttttttcggaattgtttgtggcattttttcaggagaactcggaacttgtgaggctcctcgaggagagggagtacgtccctgaaatcactgatttcttgcatcatattcacttattatgtttttgagtggatggagaatttgattatatgtgatcttgttttgacttgtttttgcttgatttcgtgcatacagcaagatcatagagttgagtgggacagagttgcagaagttgcggctcgctaactggcagctcgcgcaggcaaattcccagatgctggcagtaagtttgcccctaatttttttctgattccttccactattcagttgtcgtttgaaatctgtacagtcagttattgtttcacccatcttcttgatggaacttgattgttgtctctttttgttctccaggagctcaaccttgggagagatagggtgagttcatggctctctgatcattgtgaatcttgggaagagttttggacttttgattgttgatggcattttcaacacgcatctgattagccaccatctttcttcttttgaagctaaaaaagctgcaacatcaactcgcttgctcgagagctgttatcgcaacaaaaacatcagaattggaggtataggaactgatgctaatgtcgttcttgctccaccttcgtttcataaattccatggaaaatgttgatgcaatttgctgttcttatcctcttattattgcaggaggccaagaaggcgatgaagcgcaataggaacctgccactgccagagaaggctcctcctgcaagcgaaacggcgcagcagcagcagggttctgatagagcggcacagatcaaggatggagatgtcgtcaatccagagcccgccgcggcttcagacgcatcgcatgcggcaagcaccaagaaactcagcaacgccagcaggaaacggatgcaaagatctcgatgtaacaatggccgctaaccattttgcttgcaatgacctgtactaattctcatcagcatggctcactgattgattgatctatgctttccagctctaggaccagctgcaacgacgaaactagcagcgacaccaaaggagaaggagaatgtgcagagaaggtggacgaaaatctctggagtgccaaatgattcagcaaagtaacaactgatgaactgaattgactgaaatcgcctgtgtgtttctgcaggaagtccatgagaacaccggtaccacagccgagcgagcatagggaggacctgttcgagatcgaggacctccagctcgcgatcggcggcggtggcggcggcggcgacagcaaggccgggaccagtgaccctcctgagcaagcggcggtggcggtggcggcggctcagttcccgcggaggtcgtcgctggggaggccgatcaggagggccacggagagggtggcctcctacaaggagatgcctgtcaacattaagctcaggaggtcctagcctagcatcctctcctaaggccagaatgtcttatagtctgatagagctgcgtgctgcaatgattctttgcagtttagttagttagtgtagcatgtcattttgtttgttggaatggttgttggattgaattcttgatgtaccatgtgtgtattctgagctgtgacacatttatttacggttaagagggggtgctgtgtgtgaagaattgctcgggatctgaccaatttggaaatgaaattatgattaagatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0457400, RefSeq:Os10g0457400