Os01g0100800

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Revision as of 04:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0100800| Description = Protein of unknown function DUF1664 family protein| Version = NM_001048274.1 GI:115433961 GeneID:4326458| Length = 4...")
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Gene Name

Os01g0100800

Description

Protein of unknown function DUF1664 family protein

Version

NM_001048274.1 GI:115433961 GeneID:4326458

Length

4636 bp

Definition

Oryza sativa Japonica Group Os01g0100800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28818..33453

Sequence Coding Region

28940..28976,29146..29228,29735..29806,29885..29963,30258..30325
,30505..30606,31377..31466,31542..31616,31712..31744
,31828..31905,32274..32330,32400..32471,32543..32617
,32975..33124

Expression

GEO Profiles:Os01g0100800

Genome Context

<gbrowseImage1> name=NC_008394:28818..33453 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28818..33453 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgctgggaaagatcgtcatcgtcatcggctccggaatcgttgggacattactcaccagcggagaggccaagattgcgctccccgattttagggatgtgctctctggtgccttcaagtttgtgaccaagcaagacaaaaaggatggcccatccaccagcagccctcacgctgctcacttgctatctcaggtcaatcatctcagagaggacctccaacttttgtccaggtcaaatcaagttgctattgtcaccgtcgatggtagaccaggccctggtgcttatggtataacagctgttgttgctggggctatcggctatttatacataaggtggaagggttggaaactttctgatttgatgtttgtgacgaagcgtggcttatctgatgcctgcgatgtggttggcaaacagttggaacatgtttcagagaatgttaatgctgcaaagaggcatctggcaggaagaatagatcatgtagattgtactttagatgaatgccaggaaattacagaatccacaagaaaagaggttacagtcatccatgaagatataagtgccttccaggaggaaatgcaatcagttcatcttgtggttcgtactctggagacaaagcttggacgtctttcatatacccaagatcgtacagcacgaggaatttatgacttatgcgagttcactaaaaggctggataagagccccaaaactgatactcgtcaggtcttatcatcaactcctcttccagctattgaattgccagagagaattacaagggctgcttctttgcctccaagttcagaaccggagttttctggccctcgatcacctgtaacagaggcatctaaggttgtgcattctcctacaactatgtcggcatcaggactgagtatgctagttgaaacatcaatgccacctaaaaggggtgttttgagccgagcaagttctatgaaagaaggatcccaggagctatcaaatgggtcatcaagttcaggggaaccaaccactgggaggaatgttccaaattcaagactgtttggagggtttggttttttgaagagttctgccagttga</cdnaseq>

Protein Sequence

<aaseq>MVLGKIVIVIGSGIVGTLLTSGEAKIALPDFRDVLSGAFKFVTK QDKKDGPSTSSPHAAHLLSQVNHLREDLQLLSRSNQVAIVTVDGRPGPGAYGITAVVA GAIGYLYIRWKGWKLSDLMFVTKRGLSDACDVVGKQLEHVSENVNAAKRHLAGRIDHV DCTLDECQEITESTRKEVTVIHEDISAFQEEMQSVHLVVRTLETKLGRLSYTQDRTAR GIYDLCEFTKRLDKSPKTDTRQVLSSTPLPAIELPERITRAASLPPSSEPEFSGPRSP VTEASKVVHSPTTMSASGLSMLVETSMPPKRGVLSRASSMKEGSQELSNGSSSSGEPT TGRNVPNSRLFGGFGFLKSSAS</aaseq>

Gene Sequence

<dnaseqindica>123..159#329..411#918..989#1068..1146#1441..1508#1688..1789#2560..2649#2725..2799#2895..2927#3011..3088#3457..3513#3583..3654#3726..3800#4158..4307#ggcaagatcccacgggcgatgcgaacgagcaccggatccgctgcggctgctcggcgtcgggtcggaggtgaggtctcgaaaccctagctgctccgacgacgatcgtggcagccgccgtcgccatggtgctgggaaagatcgtcatcgtcatcggctccggtagggatccactctcgcgatttctgtgcgtctaatctgtatgtatagggtagcttggcccaatcccccctctctctcgttagcctctagctcgattcgctcctgctcctgtttgttgcttcatttactggagtagcttcgattagctttacttgtttggaaattgcaggaatcgttgggacattactcaccagcggagaggccaagattgcgctccccgattttagggatgtgctctctggtgccttcaaggttgttcttttttctttcaatttcaatcattccttcctttcagtagtattttgtttttatttagagtaaatttcacaaaactacatattttatggttcacgttgcagaaaaccacatattttgatacttggcacttaagtacatatattttggtagtttagtttcacaaaaccacactatcgatgaatggattcacttgtgatatgacgacgtggttgtttcatctagtatgaggacgtggcatcatattaatttcgtgcgatggctggtaataggatgccatgtcctcgtcctaggtgaaacagccacatcatctcgcgggtgaatctatacatcgataatgtagttttgtgaaactacacgaccaaaatatatgtactcaagtgccaagtgtcaaagtgcgtgtggttttctgcaacttgtaccacaaaatatgtagttttgtgaaatttactcttttatttaagacataaaaggttcctttgctcctttgctctgctctctagtttgtgaccaagcaagacaaaaaggatggcccatccaccagcagccctcacgctgctcacttgctatctcaggtctcccactcgtcatctcttactgtacttcatcgctggatggctccatgattaacccactgctcatctaactattaggtcaatcatctcagagaggacctccaacttttgtccaggtcaaatcaagttgctattgtcaccgtcgatggtagaccaggtctctcccattcttctctgttctgttgtatctgcagtgtgcttttttcctggaattattaaccataacctattaacctagtgatatttatgttttctttaccgtccatatcgtttttcctgccaaccattatcttggaggaatacattaagcccattttctgatctaactaatttatggaaacttgctcgtgaaatcgtttgatgcccttttggacaccaaatttttgtatgtaatttttgcagctacttcattgtcttctatactaacgctgacaaattctttcttttgcaggccctggtgcttatggtataacagctgttgttgctggggctatcggctatttatacataaggtggaaggtaaaagtaatcactgattctcaacttggcagaagggtgctattgaacaattataaacacatcatcttagactatcagacaagcaaagttttctctttttctctctccttccttttcattttagggcaactgtcataatccacaaaatggggcaatcaagctaactcggtgatttacagggttggaaactttctgatttgatgtttgtgacgaagcgtggcttatctgatgcctgcgatgtggttggcaaacagttggaacatgtttcagagaatgttaatgtaagtttctccttcgttcactggaatatgaatattgcactatttgaagcttttacatgcatactgcaatgatcctatatttctctctttgggaagttggaactgttgtttgttgaatggagttcaatcctttaacatcccgttaaagtttgtggcatactgtatgtcaatcactattggactgccacctcaaatgagagagtacacatcaggccgctcaattaaaatggttaaaggggaaatatctagtgaaaaccatcaaataaatgaaaacctgtgaaaaccggaccgaatctaaattcataacagtttcctattactgttcacctgaaatttgtcttttttgttcctcccaaatgaagttgagtttttacttaagatttggtgggaatgttgcctctagtttttttttcatgaatttagagaacttttaggtccggttttcacttatttgatggttttcaccagatatgtccacatggttagaataccttggatttgcaggatgacctttcttggatatgaacatttacaattatgtgttgtttttgtatatggcatctttataattctattaagcattcttgacctatttggaccaaacaagaaaagttaacctgagaaaacaaaacagaatctatgattcccacctcccactagatatgcctctgaacattttgaggctagctttgttatactgttgcatctgcgtgtgcttactcccactgtttgattcaaattcgtgtttatgtgcaatcttctgatatcaggctgcaaagaggcatctggcaggaagaatagatcatgtagattgtactttagatgaatgccaggaaattacagaatccacaagaaaagaggtttgaatgctcaagcattatgttaataggattttatatagtttattggaggttgatacaaaattaattcaataggttacagtcatccatgaagatataagtgccttccaggaggaaatgcaatcagttcatcttgtggttcgtactctggtaggtgccttgtattccgcatacacttctttttcaagataactcttttcctcactggtgctagatggaaactgacttcttcccttgtactacaggagacaaagcttggacgtctttcatatacccaagtaattaagagtttgcaacaatataacttgctttacccccagaaatatgcattttgctaacctcttttactgaaatgtcttaggatcgtacagcacgaggaatttatgacttatgcgagttcactaaaaggctggataagagccccaaaactgatactcgtcaggcaagttagcacaatgcccaaaagctatttttggcagaccttgctatgttgctagcctgaacttctattcccttacgatcccatactagaacattattgatataaaaaggcatacacttacacatgagtttctgatagattgtgtaaaatgactgctcagacattgatttggcattataagttatgatatggctcctacatgaccaactttaatctatttcttttgatccatgagatatccctcaggcaatgtccctcgacacagtttctggcgtgataccaattacgatgtattaagtggcaccatgaagctttcttatatcatccttctatactgatagtcttgatttttcttaatcgatttccaggtcttatcatcaactcctcttccagctattgaattgccagagagaattacaagggtaaagttgtgcacctttttgaatgttaacatgatttggattatctgaccttttattttcttaccacaggctgcttctttgcctccaagttcagaaccggagttttctggccctcgatcacctgtaacagaggcatctaaggtcaggtctggttttgtgtctgaggacatgtttgacctgggttattgcatctaattatttttcttttgcaggttgtgcattctcctacaactatgtcggcatcaggactgagtatgctagttgaaacatcaatgccacctaaaagggtaatatcatctaacatgcttttaaattgaatagagcgactcatggcctattaagtgttaatgcttacgctgggaaagatgaagcacttcgcctgatgattatagacattggaaatactagctgtttacaaagacgatggtgtattgactatgcttgagtgaacacattaatagtgagtctgcgttatactttctggcaatatgcccgagcttttatcacttttcgttgctcgactaggtgtgccattgttgttaccttccaaaactctatagcactaaatgcaaaccagaacgtaaggagtgtgtatgccctaaactgagcagcttaagttgtcttaatcctgcatgaatctccagggtgttttgagccgagcaagttctatgaaagaaggatcccaggagctatcaaatgggtcatcaagttcaggggaaccaaccactgggaggaatgttccaaattcaagactgtttggagggtttggttttttgaagagttctgccagttgagatacatggcattgtcatggttttacccaaaggagttggattgacctttacgtgtatatgtattgctagctactaggtgccagtagaaaaatatgcagttgccccatggcatcactttcacctattggaagtgccaattttttgtagaaattaattaatctatataccaaatacaaatgcattgcagagatatactgtttgtcggttgtggttgtaaaaaaaaactcgtaggggcagaaagagacacctgattgcgtcttgttgcagcaagtttgtttggggaggatgtactggaataagggtatagtagtagtaggaattattatggc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0100800, RefSeq:Os01g0100800