Os01g0102900

From RiceWiki
Revision as of 04:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0102900| Description = Light regulated Lir1 family protein| Version = NM_001048288.1 GI:115433989 GeneID:4326442| Length = 1396 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0102900

Description

Light regulated Lir1 family protein

Version

NM_001048288.1 GI:115433989 GeneID:4326442

Length

1396 bp

Definition

Oryza sativa Japonica Group Os01g0102900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:167920..169315

Sequence Coding Region

168599..168656,168751..168909,169091..169260

Expression

GEO Profiles:Os01g0102900

Genome Context

<gbrowseImage1> name=NC_008394:167920..169315 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:167920..169315 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagaccgctgctagcagtgtcgttggattgtcggccgtgttgcccgctgctgtgaaggggcgcagcctgcagattcaggctcctcgccgtgttgcgttgcgcgttcgtgcggcggcggcggcggtggcagtggaggctgcggaggtggactacagctctaacatctcggtgtttccgatggaggcgtgcgacctcatcggcggcgaggcgtgcaacgtgcagatgtacccagaggccaagctctcatcatcggctgctgttgctgtttctcgtgcggcggcggaggaagtcgacagggactacctatcctacgacgagcccaccacggtgttccccgaggaggcgtgcgacgatctgggcggagagttctgcaaggccacctga</cdnaseq>

Protein Sequence

<aaseq>MQTAASSVVGLSAVLPAAVKGRSLQIQAPRRVALRVRAAAAAVA VEAAEVDYSSNISVFPMEACDLIGGEACNVQMYPEAKLSSSAAVAVSRAAAEEVDRDY LSYDEPTTVFPEEACDDLGGEFCKAT</aaseq>

Gene Sequence

<dnaseqindica>660..717#407..565#56..225#tctaccaccaagctaattaagcaaaagaagaagaagaagaaagaagaagaagaagatgcagaccgctgctagcagtgtcgttggattgtcggccgtgttgcccgctgctgtgaaggggcgcagcctgcagattcaggctcctcgccgtgttgcgttgcgcgttcgtgcggcggcggcggcggtggcagtggaggctgcggaggtggactacagctctaacatctcgtaagtactacaattgtctgtctatacatgatgcatctatcgattgatcctagcctaggcaccaattatgtttgtaccaaactcaccattgcattgtgcactgcaatgcaactcatcataccattactagtagtatatagtacagtatatgccatgaagtgaaattgactactgcgcgcagggtgtttccgatggaggcgtgcgacctcatcggcggcgaggcgtgcaacgtgcagatgtacccagaggccaagctctcatcatcggctgctgttgctgtttctcgtgcggcggcggaggaagtcgacagggactacctatcctacgacgagcccaccacgtaattaattaagctctactactatactacccaactgatgaaatctagtgtaactaactggaactgaaatcggaaaacacaaaattgcacgcagggtgttccccgaggaggcgtgcgacgatctgggcggagagttctgcaaggccacctgatcccattcccatccatggagaattggagtcttctatcatccttcctcctctgctccactaccttaattccatgtagctacagatttatatgttaatcatcatgtaatggtacatatctccttgttaataaggcacgctagtctagctcctcaaaatgatttacaataatataatatttacatacatataatacacttactccatcgaacaatacctctgttatctcatggttacttcccatgatcccatcatcaacaccaacattcatcacactttgctgcgttagagcaggtacaatggcaggctataagccagctacaaacatattttacgaagataaatcaagagagagaagagcaacgggctacagatttgtagccagctgtagcacggactccaagacgcagtgtgtctatgacaggtgggactagatattaatagtgtagtatgtaactattgtatgaatgggctattagattgactatagatgaattggagctagtagttggctatactattgaacttgctcttatatagcaacaggtacagtatatgaattaattatctcacaactattggaaagttggcgccagaaaactgagggagcactgaaacaaatttgttgtgcggaaacatttatattaaaaaaaacatatattatggacatatgtgattacct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0102900, RefSeq:Os01g0102900