Os01g0104600
| Gene Name |
Os01g0104600 |
|---|---|
| Description |
Similar to Light-mediated development protein DET1 (Deetiolated1 homolog) (tDET1) (High pigmentation protein 2) (Protein dark green) |
| Version |
NM_001048301.1 GI:115434015 GeneID:4326296 |
| Length |
8045 bp |
| Definition |
Oryza sativa Japonica Group Os01g0104600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:247828..255872 |
| Sequence Coding Region |
247971..248107,248369..248468,248861..248956,249617..249781,249860..249940 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:247828..255872 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:247828..255872 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgaccttcttccgcagcgccaacctcgcctccagggtcttcgaccgccagttcctctccccacgccccggcgctactgttaacactgttagacagttctatgagaacttggttccgagttacactatatgtgacatagattgcccagattattcatttcgtaaattcactgatgatggcaactatcttgtggcttttagccggaaccaccaagatttaatcgtgtaccgtcccatctggccaacattttcatgcaatgagccatgcgactctcatgatcttccacccaaagcaaagaaattcgacagcttctttaagcagctctactcaatttcacttgcatctagcaatgaatacatctgcaaggactttttcctttacatggagtgccatcagtttggcttatttgccacatcaactgcacaaagcaacgattcaagtgccactgagggtgctattcatggggtaccatcaattgagaaaattactttctatcttgtcaggctagacgatggcgcaatactagatgagaaagctttccgcaatgattttatcaatctggctcatagtattggagcttacttgtatgaggacctgctatgcattgtctctcttcgatatcaaacaattcatgtcctacagatacgagattcaggcaaccttgttgaagtacgcaaaattggtgcattttgccaggaagatgatgagctatttctccattcacatggtcaggctgcacgaggtgtttcttttcttcctggcatcaagcaacggttgttgtcatttatttttcgcaagacatggaatgaggaatctgatcagaccttgagagtccagcatctgaagaagaagttctattttcactttcaagactatgttgatcttatcatatggaaggtgcagtttttggatcgtcatcacctatttatcaagtttggtagtgtggatggaggggtttctcgcagcactgaacagaattcagcattctttgctgtgtacaacatggagacgacagatattgtttcactctatcagaattcttcggaggagctctattcattgtttgaatatttttatgaccattttcacacaaatccacaaaattcatcgcatggaaattttatctcgtcacattccaataatgttcatgctctcgatcaacttcggacaattaaaaataaagcaaacagcacctcacagtttgtgaaaaagatgatggcgtcactaccttacacttgtcaatcacaaagtccttcgccatactttgacctatcattgtttcggtatgatgagaagctgatttcagcgattgatcggcacagacactgtacagagcatccaataaaatttatatcagtgaaacagccaaatgttgtcaaattcaagataaaaccaggttcagattctggtgcttctgacagcagggcaaaaagaatatcttccttcttgtttcacccatttttccctctcgcactttctattcagcagacatatatgcagccaactgttgtcaatttacatttcaggagatag</cdnaseq> |
| Protein Sequence |
<aaseq>MATFFRSANLASRVFDRQFLSPRPGATVNTVRQFYENLVPSYTI CDIDCPDYSFRKFTDDGNYLVAFSRNHQDLIVYRPIWPTFSCNEPCDSHDLPPKAKKF DSFFKQLYSISLASSNEYICKDFFLYMECHQFGLFATSTAQSNDSSATEGAIHGVPSI EKITFYLVRLDDGAILDEKAFRNDFINLAHSIGAYLYEDLLCIVSLRYQTIHVLQIRD SGNLVEVRKIGAFCQEDDELFLHSHGQAARGVSFLPGIKQRLLSFIFRKTWNEESDQT LRVQHLKKKFYFHFQDYVDLIIWKVQFLDRHHLFIKFGSVDGGVSRSTEQNSAFFAVY NMETTDIVSLYQNSSEELYSLFEYFYDHFHTNPQNSSHGNFISSHSNNVHALDQLRTI KNKANSTSQFVKKMMASLPYTCQSQSPSPYFDLSLFRYDEKLISAIDRHRHCTEHPIK FISVKQPNVVKFKIKPGSDSGASDSRAKRISSFLFHPFFPLALSIQQTYMQPTVVNLH FRR</aaseq> |
| Gene Sequence |
<dnaseqindica>7766..7902#7405..7504#6917..7012#6092..6256#5933..6013#5791..5847#5489..5557#5083..5178#1320..1548#775..1199#432..512#cgcagacagtaaggaacacaggcgccgcggccacaacccacacgcgaaccggcgaacacgagcgagagtgcgagagcgagacgcatcctgccaccaccggcgaccaaggcccgcagcgagccggtcgcacggtggcacctcgcgtcctcggcccctcctcctcgccatccgcccatccctcgtcggtcgcggcctccccgaacgagctggctccgagccgagccagctcggtacactaacgagctggagcgagccgagccgagccaagatatccacccctagtgtggccacaaacaacaagagagagcagacaccaccacaccatccaaccaaccaaattcctctctcctccgccgcgcccgcgccgcagcaagcaggagggcctccgcccgtgcgatgccggcggcggctaggctacgggcggcccggtgatggcgaccttcttccgcagcgccaacctcgcctccagggtcttcgaccgccagttcctctccccacgccccggcgctactgtacgcccaccgccccccattcctttctctttctacggactatatattgactagtattcctttcttatttgctgccttcctttcttattgagtatatgcctgacctacctacccacatagaatttcccttttctcgcttcaacaattgtcaattcactattatcatcgtcacacgtctcgactactagttcgcatcgcgcactgtctattcaattatactagcagatttcatcatcttcttttttccccctcttgttgacaggttaacactgttagacagttctatgagaacttggttccgagttacactatatgtgacatagattgcccagattattcatttcgtaaattcactgatgatggcaactatcttgtggcttttagccggaaccaccaagatttaatcgtgtaccgtcccatctggccaacattttcatgcaatgagccatgcgactctcatgatcttccacccaaagcaaagaaattcgacagcttctttaagcagctctactcaatttcacttgcatctagcaatgaatacatctgcaaggactttttcctttacatggagtgccatcagtttggcttatttgccacatcaactgcacaaagcaacgattcaagtgccactgagggtgctattcatggggtaccatcaattgagaaaattactttctatcttgtcaggtacaatcatcttgtttcgctaggaatgcacttttagttgtccgttatgatgtctatgtattataaccatcctttcctttcgtttgaatggttctcgacttctatatttctcttgttcaggctagacgatggcgcaatactagatgagaaagctttccgcaatgattttatcaatctggctcatagtattggagcttacttgtatgaggacctgctatgcattgtctctcttcgatatcaaacaattcatgtcctacagatacgagattcaggcaaccttgttgaagtacgcaaaattggtgcattttgccaggaagatgatgagctatttctccattcacatggtcaggtacctactgatccctacggcaagattgctggatctatatttagtttacatcatagttggtactggtcatgtattacctgtctaatcaaattggtgttgattgcactggaaccatgggcattcatagttcaaataatagtaactagaaagaagcacgcgctacgctgcgtgtgatctaacaattactgtttgcacttaaaacaaaaatcatctttcaccatacttcgtacttttctttgctctgccatccaagcatgctctgtaatatgatcaaattgtaaataaaaaaactaaattgcatcattaaggtaaaatatggtataaatttatcttgcttcccccaaaagatagatatcaccgtaacatctgaacttaacatgttcaccaatcctcgataatgcaaagggtaaagaatagaagatatctttgcattgatccaattcaagattattcaaaattgacttcagagtcaggataacacattagttacactgaccagatataatctgatatttgagatttatttgattgaggaatttttttcataaaaaagaattagtagctatggccagtaaagatccaaccaccagcttgcaggtgcttgagatgtactgcacgcttgctgatccctatcaccatctacaatgataataataagagcaatccatgagaattggtctagacagtttttacaatagaaggtaaatatgcccacaaaatatatagagaagttggtaagggaagcatgactaactcaaaaaactaaaatatgtatggctgtgaagtagggagaaatggtgtttccatacgacttaactaaaatgcctcatttgtatcacaaagaactaaactgcattgtaataattaacctagtgaaaacttaatatgtggtagaaaaataacagatcatgtagttagtgaaatatggctatcgttccatattgagaaggaaattattgctcaggtaagtggtcatgcaatccaagatataccatataagcctctatcatcttagtgtgcttggttcttcaactgatagcttcgttcattattttttttcatgagctgaggacaatgggttgcccctctcaacaaaagtaggagttttgttttgcaagaaggatctgtcaccttgcttgtctcaagataaagaacaactaagacataaatataaatcatggatgctgtatacaaaagaacaattttcatgaactcctatccaaaaagtaagtacacttgctataacaataggatattttgtaaagaaataggaagaacatggagccgatggcaactatattagtggtacatgcgctcatgtgtaatcaaggaaaactaatgtatatagacaacccatcatagaatgaagaagcgcatctagaatttctcataggatctctttaaaaaaaatcaaaactgaaaacacgttgcagaacctttcatgtgggtctgaacttatcccacaatcatttatgaatattcttcatttgtatcttgtacatataaattggaagacctacaaactataactgtcactttgtcagataggttgttgctttctcataggtgggacagagcatatacttgacatttgacatcatgatgaattaagcctaaatcattttgctgaaatagaatagaacattgctctggaagtttggatacctcaatataattcaaatgcaagcatcagcagttgctgaaagtgagatgtcttgttcattttccaaaatgatggtcattcaacagtttgtcgatgagataaacattgcatgattgtaatattctgcaaattaaaaacatgatgaaccaaaacttagttgatttgaaaatttaatatgacaactaaagcaaatatgaaagtactggattaaggagctgaattctacaacttccatatacaaagaatggcattatctgccatgtaaatggggtgaaaaccctctgcaagttgacagatcaagttatagtcgaactgcaatacacagacttcttatcagaagttacctctgtccttaaacttgatacctgcaactttgcagtttttcacattctctgatttggacttcaaagattgcaaatatcagctagatgtaaattgcatactaagaaaagaaaatcatataattgaaattaggatgaagcatgaaccaattacctcataaattggaatgtggtctgaatataaataaataatgtagtctctgaaaactgcatcagagtagcacaatcttttgcccatcttttcccctagttcctctattgctcccttctcacttcaattccattgggtctagcagtagcacaatgggatcaccctcctctgctttcttcagtaggaatatcgctgtaaggaaaaaaaagaaagaaagagggcagccgctagcatacctctcgttcgggtggctggatcttccgatgtggcaatgacggctagaagagcgcggtggcggcagctgcggtgatgtcggcggcggcgacgttggcggcggcgacaacggcgatgacggcgtatgcgaggggaggagaagagcgagggagcgggccggcgcgcatgagggaggaggaggcgaggcggcgcgcttgcgcggctgcgggcgaagcggacaatgaggctagggtttggtgcaatctctgccgtccgtttgtgatccgacgatatcacaggtgtggaagcgccggcacggtaggacagatgtacgacccagatcgatcgtagcacaagatcggacggtggggtagctgggactggcacataattaactggaagttcagggacctttgtgcaaaaatacgctgacgtggcgctctaattctcaagcatttccacggcgtttaagtaaactaatatatgagagctactggagcatcaccaggagattatataaagaggagtaatcattccagttttaatgggttgccagataaaacaacaaataggtcaataaccactgatttcaacacccattctttgctgaaaaataaattaggctataaccaagaatatttattggactgaattgatcttctagactgtagcaagcaatatttttggtgctatgttaaaaatagagagaaagaaaagaaaattgtatgcctgcatctgtccaggagtgcttttgttctgacatatttgattatctatttgctaatgacattcttctattgttttcatattgtttctgttatgtaaacggtataacttacaggagactagtgatagagaagcagatatgcacttccccatttgttgcttgaaatatatttctcgtaattttatttccaccatgttcattcattcattcattcattactactagttctttggatttttttttaactttggctccttgtttcccccactatttttattgcacaaaagcgccttctcagtctaggaaaatattcatgtccatgatctattattcttgatcaacaatagttgatattattctagttatgaacttatgcacgataaatctaaatcaaatctacgtatgaatcacaaactgtcaatgtacttgatgcctgcaggctgcacgaggtgtttcttttcttcctggcatcaagcaacggttgttgtcatttatttttcgcaagacatggaatgaggaatctgatcagaccttggttagccatcttttctagttcattcatttggtattagttttgaattaaggtgtgcgttgtcttctgtgccatggtcctgttccaaggttgatcacatacttttgaatattgatgtaaagtagatattatatttaagttgtcccaactgacatgcccactgctaaaagtaatatttataccttttttccatccttctcttgtatatttcctctttcattggtactgttgtgttctgtctttggaacttaatttgttgtggagcaaaatattttgttttaattgtttgttgaaccaatggatttgtttacagagagtccagcatctgaagaagaagttctattttcactttcaagactatgttgatcttatcatatggaaggtacctacatacatccactgctcactttgtctcttactctctttccctacttttatttcttgaaaagtttcttaaccctttacctggaaccaatatagttaattttagctaactctcagtaataacacaaccttgatgatagagcatgtgctgataaccaaacattccatattctatcaaatatacatatatatatttttcgtaaaggtgcttataacatgatagttgaacaggtgcagtttttggatcgtcatcacctatttatcaagtttggtagtgtggatggaggggtaaatccatttttccagacatcttaccagtcagttgtgcataacctgatgtcatttaactgtaagtacatttatgtttctttaggtttctcgcagcactgaacagaattcagcattctttgctgtgtacaacatggagacgacagatattgtttcactctatcaggtacctattctcattgaaacatgttgttggagttgtttccgtttgttacgttgagcttattatgcaatttatcaacagaattcttcggaggagctctattcattgtttgaatatttttatgaccattttcacacaaatccacaaaattcatcgcatggaaattttatctcgtcacattccaataatgttcatgctctcgatcaacttcggacaattaaaaataaagcaaacagcacctcacaggtaatattgatagcatcaggggtatgatttttattttttgactcactacagttcttggctctgttagtctgtttatattgtttccacaagatgtgagattgtttaaaagttattgtgctaatgcctacatcttttgcaatgttctgattagaaaccgtacgagtttcaattattaagtcaatactgctcagttctacatgcttggatataatgtacagcaacactaaatcaccaacattgaactgaataatgtagagcaacgctaaatcccaaatgcataatgaaagttttcttaaacattgaactgaaaattttctgaatcgtcttggcattgaactgtatgtgaggaatttaaaaggtatccctgtattaccgttaagccttgaaccttgtgagcttgagcagtcttccagtaagggcctttttttatgtctgcttctattaacaccaggacaagtggtttgcttgtgaaaattttagaatgagccaaatctttgtgatgaaaagctagaggtgtgaaattactagttgatgatctttgatatttcttgaaatccacatttattttatgttactcttactatttatatatggcataaggcatatgctaactaatttgtgatgctgacttttggtaaatgcctgctctatatttagcagtttgtgaaaaagatgatggcgtcactaccttacacttgtcaatcacaaagtccttcgccatactttgacctatcattgtttcggtatgatgagaaggttcgctcttcaacttgtttgaaataattatacatcagaaagcagttgatattttcgaaatttatttttggctacttttacagtttacagtttacagtcaagttcaaacacatagaagatgctaccttgactaacaaatatgtgacacaatcttctctaaatataagccatgcgaggcacttttgtctattttatcccccttttgactttgctaaataaaaactaccactggcatgaattatggttgttcttttccatgtgggcataactgaagggtaagaaaatcatctacccactttcataggtccctttgatccactcctatgaataaatgttagttttttttcttattgttatttagttcttgacatttccttgtccctcgttttcagctgatttcagcgattgatcggcacagacactgtacagagcatccaataaaatttatatcagtgaaacagccaaatgttgtcaaattcaagataaaaccaggtatttcttactagatcatcgtcgttagcaattattatctagattctgaagttcgtgcttgtatcttcatataattatcaaggacattgtgtaatattacaattacgaaggccgcatcatatgaataaaccaaaataatggttaacatgttgtgaacatataggcatactatatggctgagtgtagaataagttactttcgagtttgatctattttttgttggtcatgtaaatcaaaatatccttggtttaaactttgcaggttcagattctggtgcttctgacagcagggcaaaaagaatatcttccttcttgtttcacccatttttccctctcgcactttctattcagcagacatatatgcagccaactgttgtcaatttacatttcaggagatagaacgatattgccgttccctcaattgtatttgtaacagttgtgagcggtgcacagctcagtaaaaattttggccgcttgtagtaggatgttttatcggcaaagatcttattataggcaaaggaaaaatgtgggtttaggttctc</dnaseqindica> 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| External Link(s) |
