Os01g0105900

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Revision as of 04:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0105900| Description = PfkB domain containing protein| Version = NM_001048308.1 GI:115434029 GeneID:4326303| Length = 3651 bp| Definition ...")
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Gene Name

Os01g0105900

Description

PfkB domain containing protein

Version

NM_001048308.1 GI:115434029 GeneID:4326303

Length

3651 bp

Definition

Oryza sativa Japonica Group Os01g0105900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:308520..312170

Sequence Coding Region

308822..309070,309256..309367,309455..309552,309632..309739,309880..309918
,310002..310073,310163..310426,311867..312064

Expression

GEO Profiles:Os01g0105900

Genome Context

<gbrowseImage1> name=NC_008394:308520..312170 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:308520..312170 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgcggaggcagagcaccgcatgtctccctcccccgctcccgctcccgctccccctacccctgttgggaggaccgacggcgacgcccctcccatggtgctgggcctgcagctgtcggcgctcatcgaccacgtcgcgcgcgtcgactggtccctcctcaaccgcatccccggcgaccgcggcggttcacagcaggtctgtattgaggagttgaatcatattctggctgaagtgaatgctcaaatcctcccttgccgtgatgacctttcttcaataaggactatagccggtggtagtgtcgccaacacaattcgaggtctctcagcaggttttgggatatcaactggaataattggagcttgtggagatgacagccagggcgttttgtttgtcagcaacatgagctttagtggagtagacctcacaagattaaggacaaaaaaggggcacactgctcagtgtgcatgcttggtcgatgcaagtggcaatcgcaccatgcgcccttgcctatctagtgcagtcaagctccaggccaacgagttcaaaaaggaggacttcaaaggctccaagtggttggttgtacgatatgcaagacagaacatggaacagatccttgaagctattaggattgctaaacaagaaggtctctcagtatcattggatttggctagttttgagatggttcgtgactataggacacaactcattgaccttttggaaactggcaacattgacctttgctttgccaatgaggatgaagctagagagcttctagggggagagctgacatttgatccagaggaggcacttgctttcttggccaagtactgtaaatgggccgtggtgaccctagcttctaagggatgcatagcgaagcatgggaagcaggtggttcaagtggcggcaaccggggagagtaatgcggtggacgcgacgggggcgggggatctgtttgcgagcgggttcctgtacgggttggtgaaagggctggcattggaggagtgctgcaaggtaggggcgtgcagcggtgggtcagtggtgagggctctgggcggggaggtgaggccggagaactggcagtggatgtacaagcagatgaacgccagtggcctgctgctccctgacctcaagaactga</cdnaseq>

Protein Sequence

<aaseq>MGAEAEHRMSPSPAPAPAPPTPVGRTDGDAPPMVLGLQLSALID HVARVDWSLLNRIPGDRGGSQQVCIEELNHILAEVNAQILPCRDDLSSIRTIAGGSVA NTIRGLSAGFGISTGIIGACGDDSQGVLFVSNMSFSGVDLTRLRTKKGHTAQCACLVD ASGNRTMRPCLSSAVKLQANEFKKEDFKGSKWLVVRYARQNMEQILEAIRIAKQEGLS VSLDLASFEMVRDYRTQLIDLLETGNIDLCFANEDEARELLGGELTFDPEEALAFLAK YCKWAVVTLASKGCIAKHGKQVVQVAATGESNAVDATGAGDLFASGFLYGLVKGLALE ECCKVGACSGGSVVRALGGEVRPENWQWMYKQMNASGLLLPDLKN</aaseq>

Gene Sequence

<dnaseqindica>3101..3349#2804..2915#2619..2716#2432..2539#2253..2291#2098..2169#1745..2008#107..304#ggagcctggacctggaggagcggtgcgttctccttctccctccccggcccctagccgccgcacccccaccctcgcccgcctctcgccgtcgccggaacggaaaatcatgggcgcggaggcagagcaccgcatgtctccctcccccgctcccgctcccgctccccctacccctgttgggaggaccgacggcgacgcccctcccatggtgctgggcctgcagctgtcggcgctcatcgaccacgtcgcgcgcgtcgactggtccctcctcaaccgcatccccggcgaccgcggcggttcacagcaggtacctcctcctccctaccatacaactaacacgcataattcacctcaatttctttgctctgtaactgtctgtaactctatgttaattgatccttctgaatatgtataactggttactattctcaccacaatatatacgtattatactatacacacaagtccttttaatcttagttacatcccatagtaggagtactataaactagtacgtattccctttgattgaatctatctaggagaggagtactcctagacaacaaaaagttcaaaccatgtacctttcaggagtcagatttgacatggtccttactgtattttggttggttacatgctgcagctacattgaatttagtgttgctttcgctctcaaaacttgggtaacgaatcagtctttgcctcaactgtcaaacgcggtttcaaaacatctttcatgttgctcgctcacactgattggtctatcaatcagccatgtcatttgacattatctcatagtactaggcaaaaagcttatgctgacgaaccactgaatcattgacttttcgttgcaaagatactcctagatcaagtagccggctcaaaaacattactatcttatttcagcagttgttgtgcccttgtcacctatgtgctccacaaaagaaaaagtagacacaaaagctactactttggatgatcttgccccaaacattcagcaccttttattgtgggtcttgctgactcctcctatcctccatacaacatgctacttaagttaaaaatttgctgtaaatttggtaccgttcgatcccagctttgactttaaatatctcaatctggcattttcatgttatctaaattatgcataaccaattagaattcgacacttggaatcggttgtgacacacttcactacacttctcttttcaataccttaactccacctatcattatgtctatcaagttatctattctctcttatcgtggggctgcaccaggagattctacaagtcatcatacttaatccttgtgaatgcccatgttgctttagcataagcacagcagcaggttgtatatatttagtttcctttccacaaacgcacatgggcacatgtgcaggggaatatttccatgttattaaaaacatgtctctgagaaaatttattagaaggaaattaatgaagatcccgtgttgatagttggcatcatttcacttattcttagggtcgtagctcagcagctgttgggaggttgaagaatgatggccctgccctttgatttatgttttgtttcatttgcctatatcatgtattggctttgtttggaggcctggcctcgctacatagtgaaaaaataaacatgtagagagaaggttaccaaacattgctaaagaagccagggaagagtgctgttacattatgtttctttctgaattccacttgtcattttattttgtgatgtacaggtctgtattgaggagttgaatcatattctggctgaagtgaatgctcaaatcctcccttgccgtgatgacctttcttcaataaggactatagccggtggtagtgtcgccaacacaattcgaggtctctcagcaggttttgggatatcaactggaataattggagcttgtggagatgacagccagggcgttttgtttgtcagcaacatgagctttagtggagtagacctcacaagattaaggacaaaaaaggggcacactgctcaggtagtctaaaatctgaagccaatatctatctattttttgcccttattttgctgcttagtggataaggctgaaaataatacctattatagtgtgcatgcttggtcgatgcaagtggcaatcgcaccatgcgcccttgcctatctagtgcagtcaagctccaggtaacccttgcttgatgcagtcttacactgttacttttctcttaacagtcgtaggcttgatacgatcatttactcattaacaggccaacgagttcaaaaaggaggacttcaaaggctccaaggtggtccttttcctcttacgccacattctgtgcacacaaattccagcatatgttaccatcacacaaaaaatcttactatgtcataataaatatgtttattttttgacatggaatgtttttgtcatcatgatgtaatgcagtggttggttgtacgatatgcaagacagaacatggaacagatccttgaagctattaggattgctaaacaagaaggtctctcagtatcattggatttggctagttttgaggtctgaccgcagctcattggtaccgtaaggtctttttttggtacaggcaccagtctgattttgtttatttattacacagatggttcgtgactataggacacaactcattgaccttttggaaactggcaacattgacctttgctttgccaatgaggatgaagctagagagcttctagggtgataccctcatcgccttattgtttcagatgttcttcagtgagtgatacctattatagtatatctgatgtgtgcgtgttttttcaggggagagctgacatttgatccagaggaggcacttgctttcttggccaagtactgtaaatgggccgtggtgaccctagcttctaagggatgcatagcgaagcatgggaagcaggtgagatcaaggttattgtgatgtactacaatagcaatgttatttgggatgttattgtgatgcatactagtatttgatacacatgcatgatgcatggttcagagttgagaatggtttcctttgcagtttgtttgagcaacaagaaggcggctttgttaacatgtaaagtgaaaaataaaatgcaggtggttcaagtggcggcaaccggggagagtaatgcggtggacgcgacgggggcgggggatctgtttgcgagcgggttcctgtacgggttggtgaaagggctggcattggaggagtgctgcaaggtaggggcgtgcagcggtgggtcagtggtgagggctctgggcggggaggtgaggccggagaactggcagtggatgtacaagcagatgaacgccagtggcctgctgctccctgacctcaagaactgaagaaaaagaaaaaagggcttgccttttacttgtcaagcttccaagaaagaaacaaagattcagaccatggtcattgatggcttgattgtttgttagttagacctcctatgctcggtttctttctttgtttcttaatttgtgagatgagatgaatggaatggatggtggtaacctgcactgcactacaagtctcgctgattattcaatttgctcgagaaaactcatatatatatatatagtataataaagtaacataaaagtttggatgtatgaaaatctgaacgtgtttgttgtcagctgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0105900, RefSeq:Os01g0105900