Os01g0106200

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Revision as of 04:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0106200| Description = Similar to RER1A protein (AtRER1A)| Version = NM_001048309.1 GI:115434031 GeneID:4326147| Length = 2452 bp| Definit...")
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Gene Name

Os01g0106200

Description

Similar to RER1A protein (AtRER1A)

Version

NM_001048309.1 GI:115434031 GeneID:4326147

Length

2452 bp

Definition

Oryza sativa Japonica Group Os01g0106200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:318754..321205

Sequence Coding Region

318875..319236,320468..320648,320928..320975

Expression

GEO Profiles:Os01g0106200

Genome Context

<gbrowseImage1> name=NC_008394:318754..321205 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:318754..321205 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacggcgcggccgactccggcacggcgggcgccgcggcggcggcggccaagtggcggaccgatgcctcgcgggcgttccagtactacctggaccgctccaccccgcacgccacggggcgctggatcggcaccctcgccgtcgccgccatctacgccctccgcgtctacctcgtccagggcttctacatcgtcacctacggcctcgggatctacctcctcaacctcctcatcggcttcctctcccccatggtcgaccccgaggcccacgccgctgcctcctccgacggccccgccctccccacccgcggctccgacgagttcaagcccttcatcaggcgcctccccgagttcaagttctggtatgcaatcacaaaagcttttcttatagcttttgtgatgactttcttctctgtatttgatgttcctgtcttctggccgatacttctctgctactgggttgttctttttgtcctcacgatgaagcgccagattgtgcacatgataaaatacaaatatgttcccttcagcgttgggaagcagaaatatggcgggaagaagagcgcaggcagcagttcttcgaaagactga</cdnaseq>

Protein Sequence

<aaseq>MDGAADSGTAGAAAAAAKWRTDASRAFQYYLDRSTPHATGRWIG TLAVAAIYALRVYLVQGFYIVTYGLGIYLLNLLIGFLSPMVDPEAHAAASSDGPALPT RGSDEFKPFIRRLPEFKFWYAITKAFLIAFVMTFFSVFDVPVFWPILLCYWVVLFVLT MKRQIVHMIKYKYVPFSVGKQKYGGKKSAGSSSSKD</aaseq>

Gene Sequence

<dnaseqindica>122..483#1715..1895#2175..2222#atcgcatctgatcggcatcggcatcgtcctcgtcctcggcatcagcagcagcaagggaagggaaggattcgccgcccgcgaggtcgtcgcctccccttccggcttccgtccaggattttccatggacggcgcggccgactccggcacggcgggcgccgcggcggcggcggccaagtggcggaccgatgcctcgcgggcgttccagtactacctggaccgctccaccccgcacgccacggggcgctggatcggcaccctcgccgtcgccgccatctacgccctccgcgtctacctcgtccagggcttctacatcgtcacctacggcctcgggatctacctcctcaacctcctcatcggcttcctctcccccatggtcgaccccgaggcccacgccgctgcctcctccgacggccccgccctccccacccgcggctccgacgagttcaagcccttcatcaggcgcctccccgagttcaagttctggttcgttacccccatccccagatccagattcagatcactcctgaccttttttttttcgtctccttctaattcgcaaatctacctcttcattctattattactattgttattatgttttattcatcgcggttgacataggccaaaccaaaccatgtggcctcaaatttcacatgcttccactattcttctttatattattattattattattacatcatcaatcaatgcttgggtctgctactactacccctatcatcaaccccatttaattccatctcatgctgccatgatgtgttagctatactgtccatgtcacctctaatccaactaccctcagccctcctcaccctttgatcctgtctgctcaattcgtcctccctatcttatggagtatcttgttatattattgtgtgtgctatgtgccataacacttatctgtgcacaaacttcaattgtagtgccacactaccggaccgcgtgaattgtaattggtgtcctatggtaatacacatctttaagtttgttagtgcagcaaatgtgcgcacactgaaaatattgatgctatatagaagaaggaaattgtggtcatatatatcatcctttgcttacctcctaatgcattctatgcctttagtcagtggcatgttaaccagctaaggataagtcctaacagtacctaacagatttatatgaatttgtattccactggacatgtgcccactgccaaccatacaaattggtcttggggtcccgtaatgacctcctcaacaaagtcttgggatctcttctcaatttgcccatatctctccctttggaatttaataaatggtactggttaatgacacaataatatttatacatgcctgtatgcaattatataacctatggttcagacatgtgctatgtttcatcatgagtgaatttagatgcagaactgcgtactgcatactctcgtgaaaataaatgtttcagcctgacatgtccatggcattcattgatctgtcttaaattcagtgcagcatacaactcatgtttaactatagccttagcattccatactgtgactttgtatgcaggaaagcatacctcttatctttgcatgcagtcgctaatacgtatttcactattttctgagctaattcctttgtttcatcaaatctgaacattggttttgtgttttcaacctcagtatccacaccatattattaacattcatttgcttggctttcaggtatgcaatcacaaaagcttttcttatagcttttgtgatgactttcttctctgtatttgatgttcctgtcttctggccgatacttctctgctactgggttgttctttttgtcctcacgatgaagcgccagattgtgcacatgataaaatacaaatatgttcccttcagcgttgggaagcaggttagtttactgctcaatacatggtttatgttatctgatgagtgttggtacttggtaccatgagaattacatgttttaccacatactgaaacttgaaagaagtgccattatatatccatgcttggggccattattaaataccatcaattgtgcctttttatttgtgatcttgaacaaatgcttttacagtatgcgtcatcatgtactggtgtaaaataaatacctgtggtttcagcaattgttttgttcctcaccatttatcccaaattgttctgctagaaatatggcgggaagaagagcgcaggcagcagttcttcgaaagactgattggcagcctacccactctggtaggaaaaatggaaggggcaagaagatacagtcgatgatatttgatgtgctacataccaattgtaatatttcattcatatctagagctagaaggatattcacttgtatttcagactctggttcacggtttaaattgatattgtggtagaatgctttcttggatgggtatatagtgtgactcgttaaaaatatgacaaaacggttcagct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0106200, RefSeq:Os01g0106200