Os01g0106800

From RiceWiki
Revision as of 04:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0106800| Description = Similar to RING-box protein 1A (Regulator of cullins 1a) (dRbx1)| Version = NM_001048314.1 GI:115434041 GeneID:432615...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0106800

Description

Similar to RING-box protein 1A (Regulator of cullins 1a) (dRbx1)

Version

NM_001048314.1 GI:115434041 GeneID:4326152

Length

2582 bp

Definition

Oryza sativa Japonica Group Os01g0106800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:370831..373412

Sequence Coding Region

370911..371070,371168..371218,371324..371383,372958..373029,373115..373152

Expression

GEO Profiles:Os01g0106800

Genome Context

<gbrowseImage1> name=NC_008394:370831..373412 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:370831..373412 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggccatggagaccgacatcaacgcgccgccgccccccgcccccgcccccgccggcgccggcgagggatcctcctctgccgccggcccctcctcccgcaagcccaacaagcgcttcgagatcaagaagtggaacgccgtcgcgctctgggcatgggatatcgtcgtcgacaactgcgccatctgccgcaaccacatcatggatctatgcatcgagtgccaggcgaaccaggccagcgccaccagtgaggagtgcactgtcgcttggggtgtctgtaatcatgcttttcacttccattgcatcagcaggtggctcaagactcgccaagtgtgcccgttagataacagtgaatgggaatttcagaaatatgggcactag</cdnaseq>

Protein Sequence

<aaseq>MSAMETDINAPPPPAPAPAGAGEGSSSAAGPSSRKPNKRFEIKK WNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCI SRWLKTRQVCPLDNSEWEFQKYGH</aaseq>

Gene Sequence

<dnaseqindica>81..240#338..388#494..553#2128..2199#2285..2322#aaaaaagaaaaaaaatctcatcttccaatcccaacctggtctggtggaattcctgaatccgggtcgatcgagagctcacgatgtcggccatggagaccgacatcaacgcgccgccgccccccgcccccgcccccgccggcgccggcgagggatcctcctctgccgccggcccctcctcccgcaagcccaacaagcgcttcgagatcaagaagtggaacgccgtcgcgctctgggcatggggtaccctacgcgcatccttccttctctactcccccctaaccctaataatcttaacaatcttctgagttctgatttgatccttgttcctcctcctcagatatcgtcgtcgacaactgcgccatctgccgcaaccacatcatggatctatgtcagtccgccctcccttctcttctcttgttctttttatttccccttctttctgttacttattattaagggcgatttgaatactaatctgcttccttggctgcaggcatcgagtgccaggcgaaccaggccagcgccaccagtgaggagtgcactgtcgcttggggtacgcttccatccacttttaccaaccaatcacaccttgtttcaattgccgcatgctaaacttttctctagactggctcaccattcaggaagcaaatcttcatgtatatatcactccgccatttgccatgaccaatgtcttaattatcccattcatatatatatagctattgactgatgcctgttaatgtgttattctggttgatcaactgtcagtccactaggccagtagtctctaaccaatttgaactacacatgttctgtgcctctgttcttgatggatatggctcagtgtaatgatgtaatcgttgtgttttcaactttaggataccaggtagcgtatttttttcaaattggagagagtgattgacttataatgtagtgtaaagatacatgtgtatgtgctaaggaaaatgtttatgtgctaaaaaaaatgaaaccaaatctaactacatgcgatgtagtggtttttgttaacaagagtgtagttgagattttgaaaagaagttgtgtattcttttacatggatacgcgcatatggttccaaaccatattttaacacatcatcaggtaagattggaggacacccaagcgttcttcacccaatgcatattcctgagctttgttgcattaactccactaccatgctcacatctttattcttattactcatagagtcaagtcatgtttctgaaattatatttaagtcttttccatgttcctcgtcaaatgaccatcctcagctcatatctaatcatactacagtattcgtaatagaagttcacccagttttatagtttgcagtgctgatggttccttattgaactgaaaaagcaagtgtggttgtagacttgaactaatgtctaatggtgggatggagcagccatgagtccatggaattctagcttccttcatatattttgtctataacaaaggaattaacaattaacattgagacatatttggatgtgtatttggatttagatctttattagacataagaattttgagattagctattgttgaagctacacctggtcgtgtggttgatgtcgtcgtagacttgtagttctatggtacttaaggggagtcagtttgatgtatgttctggtactggcagggcaatctagatatgaccctgtgacaggctaaattctaatgttcaatgtttgataacaataccagtttctaggtttcgttaatcattgatatttgtttggagtaaattccccaggcatatactacaagtaacaagtatgtaatgactctctagacctaggcccttgatattataatctgccttcataattgaataataaaactctgtaaattatccaaacatactctgttagccatgaaccaaatatcactgcaagaaatgtatatgtggattaattttttaaaaaaaacattcaaagaatttatgcatagctgatgtattctttaccttttctgatggtgcttgatttcatccctgatttattcttggttttcctgtatatgatatttgcttggttgaattgttgagtcttaagctttactggatctaacatgatttgctttcgtgtacaccaggtgtctgtaatcatgcttttcacttccattgcatcagcaggtggctcaagactcgccaagtgtgcccgttaggtagttgcagttcctgtgtatgatttcctcttggagttaagtatgttggtgtgtgctgatcaatagctcttgttccatcttgcagataacagtgaatgggaatttcagaaatatgggcactagacaccacctgctgtctgcgcttgtttgttgccacggctgcgctacaaacacaagccgtatcatctgccgaacagctccatcgttagcttcttttgatgccttacatctatcgctggacgtttatcgtgcgtacttgtcccatacagggattgtgtttggatgatttgtagagagggtactgtatggcataagatccttcatattaatgttctgtgggtcacatatcaacttgctattattgtattcagcggttctctctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0106800, RefSeq:Os01g0106800