Os01g0107700

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Revision as of 04:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0107700| Description = Similar to LIMONENE cyclase like protein| Version = NM_001048319.1 GI:115434051 GeneID:4326157| Length = 3199 bp| D...")
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Gene Name

Os01g0107700

Description

Similar to LIMONENE cyclase like protein

Version

NM_001048319.1 GI:115434051 GeneID:4326157

Length

3199 bp

Definition

Oryza sativa Japonica Group Os01g0107700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:411625..414823

Sequence Coding Region

411675..411911,412097..412213,412401..412439,412513..412605,412703..412839
,413322..413670,413815..414495

Expression

GEO Profiles:Os01g0107700

Genome Context

<gbrowseImage1> name=NC_008394:411625..414823 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:411625..414823 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccttcgcctctcccgtgcaacctcctcactcgccgccgcgcgctcaccgcctgcgctgccgtcgccgcactcacggccgcggcggcgctctttttgctggccacccctcccaccgaggaccccacccacccgtatctcctcgcctccctcctccacaacaacacaagcaaccagcccgactccgcggccgcctcccaaccgccgcttccttccacttccatcctccagctccagactaatttgccatctgggtttacaacagtcccctccatgtttttggtcccttcaccttctccagcagaaaacttagatgatggttctatggaggaaactgaccctccagatttaaaggaaaatccaccggcggaatcagctccttttctccaagagcccatttccagtggttctcctataaggaggtctgatatctataataagggacatgacatgaaggaccatgcaatgcttcctccaagaccagaggtgcctatacctctttggtcaacagcagctgatgaagagctaatctatgcaaagaaagagatcactattgcaccgctggtgtccaatgaccctgatctgcatgcaccactgttccgcaatgtgtctgtctttaggaggagctatgaactgatggaaagacttcttaaagtttttgtataccatgatggagcaaaacctattttccattcaccagagttgaaaggcatttatgcatctgaggggtggtttatgaaactgatggaagggaaccaacattttgttgtgagagatccaaacagagctcacctattctatctaccgtatagctctcgtcagctagagcacaatctttatgtgcctgggtcaaatacaattgagccattgtctatctttgtaaagaaatacatagattttatctccaccaagttcccctattggaataggacaaaaggagctgatcatttttttgtcgcttgtcatgactggggaccatacactaccaaattgcatgatgaattgagaaaaaacaccattaaagctctatgtaatgcagatctctcagaaggagttttcattcatggaagagatgtgtcccttcctgaaacatttcttagatcaccaagaagacccttaagaggcattggtggaaaacctgctgcagagagatctatcctagccttctttgcaggacagatgcatggacgagttcgacctgtcctcctccagtattggggaggaaaggatgcagacatgagaatatatgaccgtttgccacacagaatcactaggaggatgaattatattcagcatatgaaatcaagtaaatactgtatttgtcccatgggatacgaggtaaacagcccaagaatagttgaggcaatctattatgagtgtgttccggtgataattgcggacaattttgtgcttccatttgatgatgcacttaattggagtgcgttctctgtggtcataccggaaaaggatgtacccaaactgaagcagatcttattggcaattcctgatgatcaatacatggctatgcagtcgaatgttcaacgggtgcagaagcactttatttggcatccaaatcccatcaagtatgacatcttccacatgatattacattcaatttggtatagcagggtaaatcagatccaaatagagtag</cdnaseq>

Protein Sequence

<aaseq>MPSPLPCNLLTRRRALTACAAVAALTAAAALFLLATPPTEDPTH PYLLASLLHNNTSNQPDSAAASQPPLPSTSILQLQTNLPSGFTTVPSMFLVPSPSPAE NLDDGSMEETDPPDLKENPPAESAPFLQEPISSGSPIRRSDIYNKGHDMKDHAMLPPR PEVPIPLWSTAADEELIYAKKEITIAPLVSNDPDLHAPLFRNVSVFRRSYELMERLLK VFVYHDGAKPIFHSPELKGIYASEGWFMKLMEGNQHFVVRDPNRAHLFYLPYSSRQLE HNLYVPGSNTIEPLSIFVKKYIDFISTKFPYWNRTKGADHFFVACHDWGPYTTKLHDE LRKNTIKALCNADLSEGVFIHGRDVSLPETFLRSPRRPLRGIGGKPAAERSILAFFAG QMHGRVRPVLLQYWGGKDADMRIYDRLPHRITRRMNYIQHMKSSKYCICPMGYEVNSP RIVEAIYYECVPVIIADNFVLPFDDALNWSAFSVVIPEKDVPKLKQILLAIPDDQYMA MQSNVQRVQKHFIWHPNPIKYDIFHMILHSIWYSRVNQIQIE</aaseq>

Gene Sequence

<dnaseqindica>51..287#473..589#777..815#889..981#1079..1215#1698..2046#2191..2871#gtctgtactggtccgggctccggcgcggcggccggccgtcgccctccgaaatgccttcgcctctcccgtgcaacctcctcactcgccgccgcgcgctcaccgcctgcgctgccgtcgccgcactcacggccgcggcggcgctctttttgctggccacccctcccaccgaggaccccacccacccgtatctcctcgcctccctcctccacaacaacacaagcaaccagcccgactccgcggccgcctcccaaccgccgcttccttccacttccatcctccagctccaggtctcctctccttttctgtcctaaagatttctgctttccaaggctctccttcttcatgaatcatcatttctttctttgtaaatagtaaatgtgcgtgattttgcgaatacattgggttattgtaacatgtcaagattattggatatcagagtgcatcaaatggcggaatttgctttgttttgcagactaatttgccatctgggtttacaacagtcccctccatgtttttggtcccttcaccttctccagcagaaaacttagatgatggttctatggaggaaactgaccctccagatttaaaggtactcacctcacctgccccaccaatccctctttttcatacatacaattccattctatatttctcttaggtacagtagcatattacaaatgttttcatcttgtcctacatcactatatcatgcaagatcgatggatatccatatatctaatctaatagcatctaatcaaagttttacttaacttcaggaaaatccaccggcggaatcagctccttttctccaagaggtacatatctgcgccgaatacatagacttgtaactaatataatttctggtttttaacctccttacttgtgaagcccatttccagtggttctcctataaggaggtctgatatctataataagggacatgacatgaaggaccatgcaatgcttcctccaagaccagaggttgatgctttacgcacctttacaatgtgatgtgagctctttgtatttggagtaaaaaaatgttaaatatctttttcttggcctgtaaacttagcaggtgcctatacctctttggtcaacagcagctgatgaagagctaatctatgcaaagaaagagatcactattgcaccgctggtgtccaatgaccctgatctgcatgcaccactgttccgcaatgtgtctgtctttaggaggtatgactatggtttaacttcatatatattatttagctaacaatttgtgagtagcattattcttatcaggggattatggacttgcatgcccaactatatgttgaacaaactttttagggagggaaacaacttttttgttgcttttttttttatcatgaagataagcaatgttttagtgttgcatacatccgctttctgacaaattcccatggttggcatgttacttttcccacacctagttattcgtagtagtttcagtacatgtggcgctcactagtttgccttaaataagtgtaattttttcctctcacattctattttggtagcgtgtgattgaaaatgttaatagaggaaactgtaatgatagcttaaatttccttcatgtttataaattatcatgccattgcttgtttgttccattgttcaatggcttctgcatttcagaagatgactatttaaatttttttttctcatgcttccaggagctatgaactgatggaaagacttcttaaagtttttgtataccatgatggagcaaaacctattttccattcaccagagttgaaaggcatttatgcatctgaggggtggtttatgaaactgatggaagggaaccaacattttgttgtgagagatccaaacagagctcacctattctatctaccgtatagctctcgtcagctagagcacaatctttatgtgcctgggtcaaatacaattgagccattgtctatctttgtaaagaaatacatagattttatctccaccaagttcccctattggaataggacaaaaggagctgatcatttttttgtcgcttgtcatgactgggtatgtattcttcctttgagtacttctcgttgttgaatggtcatattgaacaagaatattagtgcatacaaatttgaatggaggctgaaacttaatcaagaaagaagctaacatgctgtttctgattctggcccttccttgcagggaccatacactaccaaattgcatgatgaattgagaaaaaacaccattaaagctctatgtaatgcagatctctcagaaggagttttcattcatggaagagatgtgtcccttcctgaaacatttcttagatcaccaagaagacccttaagaggcattggtggaaaacctgctgcagagagatctatcctagccttctttgcaggacagatgcatggacgagttcgacctgtcctcctccagtattggggaggaaaggatgcagacatgagaatatatgaccgtttgccacacagaatcactaggaggatgaattatattcagcatatgaaatcaagtaaatactgtatttgtcccatgggatacgaggtaaacagcccaagaatagttgaggcaatctattatgagtgtgttccggtgataattgcggacaattttgtgcttccatttgatgatgcacttaattggagtgcgttctctgtggtcataccggaaaaggatgtacccaaactgaagcagatcttattggcaattcctgatgatcaatacatggctatgcagtcgaatgttcaacgggtgcagaagcactttatttggcatccaaatcccatcaagtatgacatcttccacatgatattacattcaatttggtatagcagggtaaatcagatccaaatagagtagcacttgcatctgatcagcagcaaggagctattgtggtctgatttgaattctagtatgatcctgcagcttcttcatccgagaaggcgctgaattgtgttcctgacattattggtctaacagaagaaccctgacatagtggagcttagttgtgctttaggagctgtcattttcacatttgttgattttctaatctaacgggttgtaacagttaaacggagtgttttgggaccacagctgaagataaggtgtcccgtgaatttttatctttctttgtattttgttaaacaatttttcgttgtgttttggagtagtattgattgcaaatact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0107700, RefSeq:Os01g0107700