Os01g0110400

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Revision as of 04:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0110400| Description = Similar to Acetyl-CoA C-acetyltransferase| Version = NM_001048332.1 GI:115434077 GeneID:4326136| Length = 3432 bp| ...")
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Gene Name

Os01g0110400

Description

Similar to Acetyl-CoA C-acetyltransferase

Version

NM_001048332.1 GI:115434077 GeneID:4326136

Length

3432 bp

Definition

Oryza sativa Japonica Group Os01g0110400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:548163..551594

Sequence Coding Region

548255..548399,548478..548651,548787..548892,548992..549130,549216..549293
,549395..549460,549690..549772,550102..550201,550417..550527
,550614..550655,550739..550825,551033..551118,551333..551366

Expression

GEO Profiles:Os01g0110400

Genome Context

<gbrowseImage1> name=NC_008394:548163..551594 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:548163..551594 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcctcctccgcactcggactctgacctgctcaagccgagagacgtctgcatcgtgggcgtcgcccgcacgcccatcggcgccctgctcggctccctctcctccctccccgccaccaagctcggctccgtcgccatccaggccgctctcaggagagcaaatgtggagccggcgctcgtgcaggaggtcttcatggggaacgttctcagcgccaaccttggccaagccccggcgaggcaagccgccctaggcgccggcttgcccgacactgtgccctgcaccaccgtcaacaaagtttgctcctcggggatgaaggctgtcatgcttgcggcgcagactattcagcttgggatgcatgatgttgttgtcgctggtgggatggagagcatgtccaatgcccccaaatatgtcgcggcagcaagacgggggtcacggtttgggcacgacgtcctcatcgatgggatgctcaaggatgggctgtgggatgtgtataatgatttcccaatgggaatgtgtgccgagttgtgtgcggatcaacactccatttcaagggaggagcaggatctttatgctatccagagcaatgaacgtgcaatagcagctcgtgatagcggcacattttcttgggaaattgctccggttgaaatttcttccggtagagggaaaccaccacttattgttgacaaggatgagagtcttgcaaagttcaattcagcgaagctgaggaaacttgggccgactttcaagaagaatggttctgtaactgccggcaattcttctagtataagtgatggtgctgctgcaatcgtgctagtcagtggacagaaagccaagagtcttggccttcaagttattgcaaggatcagagggtatgcggatgctgctcaggcacctgaattatttacaactactccagctcttgctattccaaaggctgtatcaaatgcgggtctccaaacttcacaaatagattattatgagataaacgaagctttctccgtcgttgctttagccaaccagaagcttcttggtattccttcgggaaagcttaacctaagtggtggtggtgtttctctgggccatcctattggttgcagtggtgcgagaatcatagtcactttgctcgggattcttagacataaaaatggaaagattggggttgctggagtttgcaatggaggtggtggtgcttctgcccttgttgtggaactcatgcaaccatcactatttacacgttcctcgttgtga</cdnaseq>

Protein Sequence

<aaseq>MAPPPHSDSDLLKPRDVCIVGVARTPIGALLGSLSSLPATKLGS VAIQAALRRANVEPALVQEVFMGNVLSANLGQAPARQAALGAGLPDTVPCTTVNKVCS SGMKAVMLAAQTIQLGMHDVVVAGGMESMSNAPKYVAAARRGSRFGHDVLIDGMLKDG LWDVYNDFPMGMCAELCADQHSISREEQDLYAIQSNERAIAARDSGTFSWEIAPVEIS SGRGKPPLIVDKDESLAKFNSAKLRKLGPTFKKNGSVTAGNSSSISDGAAAIVLVSGQ KAKSLGLQVIARIRGYADAAQAPELFTTTPALAIPKAVSNAGLQTSQIDYYEINEAFS VVALANQKLLGIPSGKLNLSGGGVSLGHPIGCSGARIIVTLLGILRHKNGKIGVAGVC NGGGGASALVVELMQPSLFTRSSL</aaseq>

Gene Sequence

<dnaseqindica>93..237#316..489#625..730#830..968#1054..1131#1233..1298#1528..1610#1940..2039#2255..2365#2452..2493#2577..2663#2871..2956#3171..3204#cgtctccacgccgtcgtcgtcgacctcaccggcggctgcctccctacccccacctactccggcggcggcgcggcggagaagcacatcacatcatggctcctcctccgcactcggactctgacctgctcaagccgagagacgtctgcatcgtgggcgtcgcccgcacgcccatcggcgccctgctcggctccctctcctccctccccgccaccaagctcggctccgtcgccatccagggtaaactccagtgctcctctcagttttcttctcctcttcctctctgaatccgatttggccatgcttccccacaaccagccgctctcaggagagcaaatgtggagccggcgctcgtgcaggaggtcttcatggggaacgttctcagcgccaaccttggccaagccccggcgaggcaagccgccctaggcgccggcttgcccgacactgtgccctgcaccaccgtcaacaaagtttgctcctcggggatgaagggtaatttcgctattttaacctctctctctctctctctctctctctctctctctttttcagttgttacttgtttctgctactcgaggatcggcttttgctttgctatctagtgctacttaaaaatgggtcttgcagctgtcatgcttgcggcgcagactattcagcttgggatgcatgatgttgttgtcgctggtgggatggagagcatgtccaatgcccccaaatatgtcgcggcagcaaggttcgttaccatcctcaagtgatgctgtaaatttcggcgaactaagccatcatccattgttcttgcttgcttatggtataatgtcaacatgttatgcagacgggggtcacggtttgggcacgacgtcctcatcgatgggatgctcaaggatgggctgtgggatgtgtataatgatttcccaatgggaatgtgtgccgagttgtgtgcggatcaacactccatttcaagggaggagcaggttgtcaatgttcctgcatctgcgcttgcatatttgtttatatctaggagctaacattggactaaagaacacctctttcttctaggatctttatgctatccagagcaatgaacgtgcaatagcagctcgtgatagcggcacattttcttgggaaattgctccggtgggtatataatttggaccgacctaaaattggttttctacatgacatatcaacacttcagtcactggcacagatttcataaaacattctggatttttcaggttgaaatttcttccggtagagggaaaccaccacttattgttgacaaggatgagagtcttgcaaaggtagtctactaatgatttctcctaatggaagtagttcatttatgccgatgtgtagcatgacattttcaccatttacatattctcaagaaattattctatatagtataaaaaaggaaggcaacagcacaaaccaaaaaaataaaaataaaaattgaattagtgcaaacaacaacaattaaacttttttcccagacctgacatgtttctttgggtgtgtctatttgcacagttcaattcagcgaagctgaggaaacttgggccgactttcaagaagaatggttctgtaactgccggcaattcttctagtataaggtttacttatttgataacaattctctaagtgacttattaacagaaaactttgcagagtagtattaacatgcaaccaaatgtcagtgcattaccatattctgaagtaacgcatttgcagttaatcctttgtttattgaattctatcattcgattttttttatttagtagaacagcacttccatcttgaatgatttaataaatctagactactttcaaagttaaactttattttctctagtttaaagtcaaattatgctatatgcatgtttacttgatgtgtgactgtagtgcacctctcttccttctcgtttaccttccaaaattcgcagtgatggtgctgctgcaatcgtgctagtcagtggacagaaagccaagagtcttggccttcaagttattgcaaggatcagagggtatgcggatgctgctcaggtaactcttacatgacttgttatctgttgaacaattattttactgggattatcaaacaaatccatgctgaaaggaactttacccattatttattcatgctaacaaatagtggcgttcatgtatcaaatctctcaaccttatcttctaaccttgcctcttgttatacagtgctctttatctgttatactcattatactaactcctttcaagcacaggcacctgaattatttacaactactccagctcttgctattccaaaggctgtatcaaatgcgggtctccaaacttcacaaatagattattatgagataaacgaagctttctccgtatgttcttgtcttcttcaatttagacagtacttacacctgaagcgtgaatctagactgaactgcatacttctggactttgacaggtcgttgctttagccaaccagaagcttcttggtattccttcggtatgttgttagattctatgtaactatacattcagcaaataggtatccccagaagatctcattaacattcatgtaaatttcagggaaagcttaacctaagtggtggtggtgtttctctgggccatcctattggttgcagtggtgcgagaatcatagtcactttgctcggggtatgctaccaggccattcaaaatcagatcaaaatattacgtgttgttctcaaatgcaaaatacttcatggctgtactgaagtttggatttagttacttcatgttaattatctgtcagcgccattttctctctttaatctgcacctttagcatgcaaaatgttgcaatcttcctctttgttaaacatcaacacgttttgctccacagattcttagacataaaaatggaaagattggggttgctggagtttgcaatggaggtggtggtgcttctgcccttgttgtggaactcatgtaagtccctcccatgtttgttcttctctggaaatgtctgagaaccaaaaaaaaatgcagttatttgttgtactgattattcatgtatagttttgtgtaagttgcaatgtatcatcagagacttctgcattttcaatctgcggtcattgtgttcattgaaaggaaatacaatagccacctagactaatttgttaaagtatctgacttgatgcaggcaaccatcactatttacacgttcctcgttgtgaagttggcgcgagcaaaaatagcacaaagctgaactgtaaagtacagtagctctatgttttcatcttatattacttaattttactgggcgttcatccatgatgtacaatgatagaaggaacgttgtaaaaataagatggctgtgcactaccgcacgagtcttgtataacttgtatagcggccatagcaataataagggaaaagaaggccagaggaatactttgcattct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0110400, RefSeq:Os01g0110400