Os01g0110500

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Revision as of 04:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0110500| Description = Protein kinase-like domain containing protein| Version = NM_001048333.1 GI:115434079 GeneID:4326137| Length = 3991 b...")
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Gene Name

Os01g0110500

Description

Protein kinase-like domain containing protein

Version

NM_001048333.1 GI:115434079 GeneID:4326137

Length

3991 bp

Definition

Oryza sativa Japonica Group Os01g0110500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:553025..557015

Sequence Coding Region

553300..553512,553589..553750,554136..554283,554368..554444,554525..554595
,554676..554762,554854..555237,555351..556305

Expression

GEO Profiles:Os01g0110500

Genome Context

<gbrowseImage1> name=NC_008394:553025..557015 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:553025..557015 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcctcaccgtctccctccccgggcaccgcaactcccgccaccgccgccgccgcgccttccaccgcgaccccaacacccgcgacgcagcccaatgccacgccggccgacccctccatcactcccccggccgcgtcccctccccttccctccgccgccacgccacccccacagcccgattccccgccgccctctccgccaccagctcctccggtcgcagtgccaccgccggccaccgtgccaccgccgcctgtacccgttgcgtctccaccaccaaccccgtcagccacattgccgccgccgtcgccaccggcttcagtgccggtgccacctacacctgctactacccctccaaagccgtcgcctgtgcagcaacccccagtggctgcatcaccacctccatcgtctccggctgatttgccgccgcctaatccgccggctcgctcagacacgccgccggtagtgcagtcacctccaccgccgcaccggagatcgccgagaacgccatgggctccaccgatggcgccgtcgccttctggaagtcctaccaagccttctccagctagtccatcaccaattgctggagatccaatcatccctacacccaataacccttcgtcgcctctggcgacgccatcagcaccaggctctggtactcctgtggtgacgccatctgcaccagtctctggccctccatcgccaggcacggctccagccacggcagctgatcgatccaacaagtcattaagtcccaacacgcaggacggcagcgtctcgtcgagcgatggtggaatgagctcaagtgcaaaggcgggcatcggtgtagtcgtcgctattcttgtgcttagcttggtaggagctgcattttggtacaagaagaaacggaggagagcaaccggttaccatgcaggatttgtgatgccatcgcctgcctcgtctccacaagtgttagggtattcaggtaaaactaactacagtgctggcagtcctgattacaaagaaacaatgtcagagttcagcatgggcaattgtcgattcttcacttacgaggaattgcaccagatcacaaatggttttgcagcgaagaacctgctaggggaaggtgggtttgggtctgtttacaagggttgcttggctgatggaagagaggttgccgttaagaaactgaaaggtggtggtgggcagggggaacgtgagttccaggctgaggtggagataatcagtcgtgtgcaccaccgccatctagtttctcttgttgggtattgcatttcgggggaccagaggttgcttgtctatgattttgtgcccaatgacacactgcaccatcatcttcatggacgtggaatgccggttttggagtggtcagctagggttaaaattgcagctggctcagctcgagggatagcatatcttcatgaagattgccatccccgaattatccaccgagatattaaatcctccaacattttactggataataactttgaagcccaggttgctgattttggccttgcaagactagctatggatgcagtcacgcatgtaactacacgggtgatgggaacttttggttatctggctccggagtatgcttcgagtggcaagttgactgagagatctgatgtattctcttttggcgttgttctcttagagcttattaccggtagaaagcctgttgacgcatcaaaaccattgggtgatgagagccttgttgagtgggctaggccattgctcacagaagcaattgagactggcaacgttggggagctgattgactccaggctggacaagaacttcaatgaagctgaaatgtttcgaatgatcgaagctgcggcagcttgcattcgacattcagcatctaggagaccccggatgagccaggtggtgcgtgttcttgatagcttagctgacgtcgatctaagcaatggtattcagcctggtaagagcgaaatgttcaatgtggcaaacacggcagaaatcaggctgtttcagcggatggcttttggtagccaagatttcacaactgatttcacccaatctagctgggatagtcgtagtagagatgttgatgcctctggttcgaggcccttgtaa</cdnaseq>

Protein Sequence

<aaseq>MASSPSPSPGTATPATAAAAPSTATPTPATQPNATPADPSITPP AASPPLPSAATPPPQPDSPPPSPPPAPPVAVPPPATVPPPPVPVASPPPTPSATLPPP SPPASVPVPPTPATTPPKPSPVQQPPVAASPPPSSPADLPPPNPPARSDTPPVVQSPP PPHRRSPRTPWAPPMAPSPSGSPTKPSPASPSPIAGDPIIPTPNNPSSPLATPSAPGS GTPVVTPSAPVSGPPSPGTAPATAADRSNKSLSPNTQDGSVSSSDGGMSSSAKAGIGV VVAILVLSLVGAAFWYKKKRRRATGYHAGFVMPSPASSPQVLGYSGKTNYSAGSPDYK ETMSEFSMGNCRFFTYEELHQITNGFAAKNLLGEGGFGSVYKGCLADGREVAVKKLKG GGGQGEREFQAEVEIISRVHHRHLVSLVGYCISGDQRLLVYDFVPNDTLHHHLHGRGM PVLEWSARVKIAAGSARGIAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVADFGLARL AMDAVTHVTTRVMGTFGYLAPEYASSGKLTERSDVFSFGVVLLELITGRKPVDASKPL GDESLVEWARPLLTEAIETGNVGELIDSRLDKNFNEAEMFRMIEAAAACIRHSASRRP RMSQVVRVLDSLADVDLSNGIQPGKSEMFNVANTAEIRLFQRMAFGSQDFTTDFTQSS WDSRSRDVDASGSRPL</aaseq>

Gene Sequence

<dnaseqindica>3504..3716#3266..3427#2733..2880#2572..2648#2421..2491#2254..2340#1779..2162#711..1665#ctagcatgtactactacactcctaatctctctctctttctcgagtggaatccattgatccattgtgtagtgggagagagacttctctacgcggtcacgggttccccagcggaggagaaagatagatagagagagcaaagagcaaaaaaatctctcttttttcttcttgttgtttctgcagttacctttgtcttgccttcaatgccaccgctttactgccggatctgaggaaagctcccatccttgctgagttcttgtgctgcttcttccacaattcttccttttgttgagaattttgccttccatctgcttaatcggtgacaaaggtggtgggatcttgcttctcttcctgcaagaaaaggctcgtttttttgtttcgccgtttgctgcttgctcaggcaggaggaaggcgatgctgttcttgctgatttcagtcttcttcttccggtggtcgaggtgaggtttgttgctacttcaccttcgcttcgttgcgctctgcggagagaaagaaagcaaaggtggtggaaaagaagcgaaaattttgcttgcttcctctgcaaatctgaggaattttctcgcagaaagcctgaattccctctgaattccggtgcatggaaagatcgtcccctccatttccaagaagaagaagatactagtagcagctgcagctacactctagtagtagtggctactagtactagctagcctccaatggcgtcctcaccgtctccctccccgggcaccgcaactcccgccaccgccgccgccgcgccttccaccgcgaccccaacacccgcgacgcagcccaatgccacgccggccgacccctccatcactcccccggccgcgtcccctccccttccctccgccgccacgccacccccacagcccgattccccgccgccctctccgccaccagctcctccggtcgcagtgccaccgccggccaccgtgccaccgccgcctgtacccgttgcgtctccaccaccaaccccgtcagccacattgccgccgccgtcgccaccggcttcagtgccggtgccacctacacctgctactacccctccaaagccgtcgcctgtgcagcaacccccagtggctgcatcaccacctccatcgtctccggctgatttgccgccgcctaatccgccggctcgctcagacacgccgccggtagtgcagtcacctccaccgccgcaccggagatcgccgagaacgccatgggctccaccgatggcgccgtcgccttctggaagtcctaccaagccttctccagctagtccatcaccaattgctggagatccaatcatccctacacccaataacccttcgtcgcctctggcgacgccatcagcaccaggctctggtactcctgtggtgacgccatctgcaccagtctctggccctccatcgccaggcacggctccagccacggcagctgatcgatccaacaagtcattaagtcccaacacgcaggacggcagcgtctcgtcgagcgatggtggaatgagctcaagtgcaaaggcgggcatcggtgtagtcgtcgctattcttgtgcttagcttggtaggagctgcattttggtacaagaagaaacggaggagagcaaccggttaccatgcaggatttgtgatgccatcgcctgcctcgtctccacaagtgttaggtaatctgatgaaatgcattttcagaaatcgcgcacctggaaaattaaaatcagtttaagttgtattactagtaggtgatgaactgagcaagtacaactcattttttgcccagggtattcaggtaaaactaactacagtgctggcagtcctgattacaaagaaacaatgtcagagttcagcatgggcaattgtcgattcttcacttacgaggaattgcaccagatcacaaatggttttgcagcgaagaacctgctaggggaaggtgggtttgggtctgtttacaagggttgcttggctgatggaagagaggttgccgttaagaaactgaaaggtggtggtgggcagggggaacgtgagttccaggctgaggtggagataatcagtcgtgtgcaccaccgccatctagtttctcttgttgggtattgcatttcgggggaccagaggttgcttgtctatgattttgtgcccaatgacacactgcaccatcatcttcatggtatggtggtaaccttcagcatattgccgcatgagagctctgcatagttctagttctgtctgaaaactgtttaattgatctgcccttgtaggacgtggaatgccggttttggagtggtcagctagggttaaaattgcagctggctcagctcgagggatagcatatcttcatgaagattgtaatattctttctggttctgtaccttattaatgtgatcatttgcacttcattttcattacatttatttcccttttgcaggccatccccgaattatccaccgagatattaaatcctccaacattttactggataataactttgaagcccaggtaacaacattatttagataaattgggagaggcgttataatgtgaccattgttactaattggctgctattcgtgtgttaggttgctgattttggccttgcaagactagctatggatgcagtcacgcatgtaactacacgggtgatgggaacttttgggtaagtaaattactgcctgccttactgagggcacaagagaacatcgtacattttcatatgatctaatgattatttgttatgcagttatctggctccggagtatgcttcgagtggcaagttgactgagagatctgatgtattctcttttggcgttgttctcttagagcttattaccggtagaaagcctgttgacgcatcaaaaccattgggtgatgagagccttgttgagtgggtaagctatatcagtaactagaaatcatttttttttagataatggaagatgagtatattgaaattagtatgttcaataagatttttgcccctgtatgatcaaatgaaagcaaatggagaaatatattttatcaactgtatttgaatagccaacttgactcatttcaaagattctaataacgtaggaattcacattgagctgttgatctctgcagttcacattttttaactgtgtttttattaggagtcaatccatatagttagccactggttgaaaagcgttctgatataaaatgtggactggtcaactatgaacatctgctgaaatcgtgttgtaaatcagtctaaagaggggatccttgtgtaacttacacaatcacttgcaggctaggccattgctcacagaagcaattgagactggcaacgttggggagctgattgactccaggctggacaagaacttcaatgaagctgaaatgtttcgaatgatcgaagctgcggcagcttgcattcgacattcagcatctaggagaccccggatgagccaggtataggactgaacataatctcatcacatctgattgaacctgaacctgttcattttaatcacatctctcctttcaggtggtgcgtgttcttgatagcttagctgacgtcgatctaagcaatggtattcagcctggtaagagcgaaatgttcaatgtggcaaacacggcagaaatcaggctgtttcagcggatggcttttggtagccaagatttcacaactgatttcacccaatctagctgggatagtcgtagtagagatgttgatgcctctggttcgaggcccttgtaatcatagtctaatactcctctaattagctagggtattgttgcattggatttgtttcatctgattttgttttcttcttttttgtggccatctctgtcaactaggagtaatgtatatcatgcgtcccactaagaaaagtgtatattgattgcactgagcgtgcctgattctacaaaatctgacagacagaagatttactagtactagcccttgaaggaaccaatgaattgcctctgttggtggtgactgaacctgcatattccactctatatttcctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0110500, RefSeq:Os01g0110500