Os01g0110700

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Revision as of 04:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0110700| Description = Similar to Phosphoenolpyruvate carboxylase (EC 4.1.1.31)| Version = NM_001048334.1 GI:115434081 GeneID:4326138| Leng...")
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Gene Name

Os01g0110700

Description

Similar to Phosphoenolpyruvate carboxylase (EC 4.1.1.31)

Version

NM_001048334.1 GI:115434081 GeneID:4326138

Length

10005 bp

Definition

Oryza sativa Japonica Group Os01g0110700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:561088..571092

Sequence Coding Region

561304..562131,562219..562425,562517..562643,562996..563084,563310..563408
,564476..564622,564750..564851,565156..565281,565713..565928
,566249..566310,567618..567746,568426..568567,568735..568830
,568924..569000,569070..569148,569229..569297,569380..569457
,569589..569703,570614..570777,570847..571002

Expression

GEO Profiles:Os01g0110700

Genome Context

<gbrowseImage1> name=NC_008394:561088..571092 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:561088..571092 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacggacacgacggatgacatcgcggaggggatatcattccaggcgttcgaggacgactgccggctgctgggcagcctcctccacgacgtcctcctccgcgagctcggcccccgcttcatccacctcctcgagcgcatcaccatcctcgcccagagcgccgtcaacatgcgctccgccggggtggaggacaccgccgtcgtcgtcgagaagcagctcggcgccgagctggccgccatgtcgctcgaggactcgctctgcctcgcccgcgccttctcccaccacctcaacctcatgaccatcgccgacacttaccacagggttcgtaaagcacgcaatttcgccgacctgtcgaaatcatgtgatgatacatttgccaaattgattcaaagtggtgttagcccggaagaactctatgacactgtatgcaagcaggaggttgaaattgttctgacagctcatccaactcaaatcaatcggcggactttgcagtacaaacaccttagaatagctcaccttttggaattcaacgaacgtgctgatcttagcctcgaggataaagaaattctaattgaagatctggtaagagaaatcacggcaatatggcagactgatgagttgaggcgccataaacctacacctgttgacgaagctagagctggccttcatattgttgagcaatcgctctggaaagcaataccacactatcttcgccgtgttagcaatgctctaaagaagaacactggcaagccacttccgctcacctgcacaccaatcaaattcggttcatggatgggtggtgaccgtgatgggaatcctaatgtcacagcaaaagttactagggatgtttccattttgtcccaatggatggcaattgatctgtacatccgggaactagacactctaagctttgagctatcaattaacagatgcagcgagaagcttgcaaacttagcaaatgacatcctgctcaaagaatcagcatcagaggaccagaagaccaatacctggaatcaaactggaccccagaacaatctaaagcttcagcacagcttggcccttcctgcacagcttccttctggtgctgatcttccatcatgtacagaatgcaacgatggggaatctcaaatcagaatgtcaaaacttccagggaatccaaagcataagttggctctaaacataacagaaaaacgtgaagacagtccattgccgtctcctagtcatcgcccgatgggtcgaactccaagtggaggtcaactaaggaagatgttcacagaatcccaaattggtcgatcgagcttccggaaacttctagaaccaagcatatcagagagaccagggagtactccttatagagttgtccttggtgatgtgaaagaaaagctgatgaacacacggagacgactcgagcttcttcttgaggatctaccatgtgatcgtgatacttcagaatattatgatacatcggataaacttttggagcccttgcttttgtgttatcaatcactgcaatcatgtggatctagtgtgcttgcggatggccggttagcagatttgattcgacgggttgcaacctttggtatggtgttaatgaagcttgatgtacggcaggaatcaggccggcatacggaaacacttgatgccatcacatcttacctggatcttggtgtttatagtgagtgggatgaacaaaagaaactggatttcttgactagagagctgaaagggaagcgccctcttgtccccccatacatacaggttactgctgatgtgcaagaagttcttgatacattccgtgttgctgcagagttaggaagcgatgcacttggagcatatgtgatttcaatggcctcaaatgcaagcgatgtcctagcggttgaactgttgcagaaggacgcaagacttacagtcagcggggacctaggaaggccatgtcctggtggaacgttgagagttgttccactgtttgagacggtgaatgatctgcgagaagccggcccagcgatcagaaagttactgtccatcgactggtacagagaccacatcatcaagaaccataacgggcaccaagaggtgatggtgggctactctgattccggcaaggacgccggccgtttcaccgcggcatgggagctatacaaggctcaggaagatgtggtggccgcgtgcaacgcgttcggcatcaaggttacgctcttccatggccgcggcgggagcatcggccgcggcggcgggccgacctatctcgccattcagtcgcagccacccggctcagtgatgggaactcttcggtcgacggagcaaggggagatggtgcaggccaagttcgggctgccgcagacgtctgtccggcagctggagatatacacgacggcggtgctgctggcgacgctgcggccgccgcagccgccgcgggacgacaagtggcggggggtgatggaggagatatcgcgggtgagctgcgcgcagtaccggagcacggtgtacgagaacccggagttcatcaagtacttccaggaggcgacgccgcaggcggagctgggctacctcaacatcggcagccgccccgcgaagcgcaggaccacgccggggatctccaaccttcgcgccatcccctgggtgttcgcgtggacgcagacgcggctggtgctcccggcgtggctcggcgtggggcgcggcctccaggacgcctgcgacaagggccacacccacgagctccgcgccatgtacgaggagtggcccttcttccagtccacggtggacctcatcgagatggtggtggccaaggcggacgcgcccatggccaagcactacgacgacgtgctggtgcacgacgcggggcggcggacgctcggggcggagctccggcaggagctggcgcggacggagaactgcgtgctggcggtgagcggtcacaagaagctgtccgccaacaaccgcagcctgcggaagctgatcgacagcaggctcacgtacctcaaccccatgaacatgctccaggtcgaggtcctccgtcgcctccgccaggacgacgacaaccgcaagctccgcgacgcgctgctcatcaccatcaacggcattgccgccggcatgcgcaacaccggctga</cdnaseq>

Protein Sequence

<aaseq>MTDTTDDIAEGISFQAFEDDCRLLGSLLHDVLLRELGPRFIHLL ERITILAQSAVNMRSAGVEDTAVVVEKQLGAELAAMSLEDSLCLARAFSHHLNLMTIA DTYHRVRKARNFADLSKSCDDTFAKLIQSGVSPEELYDTVCKQEVEIVLTAHPTQINR RTLQYKHLRIAHLLEFNERADLSLEDKEILIEDLVREITAIWQTDELRRHKPTPVDEA RAGLHIVEQSLWKAIPHYLRRVSNALKKNTGKPLPLTCTPIKFGSWMGGDRDGNPNVT AKVTRDVSILSQWMAIDLYIRELDTLSFELSINRCSEKLANLANDILLKESASEDQKT NTWNQTGPQNNLKLQHSLALPAQLPSGADLPSCTECNDGESQIRMSKLPGNPKHKLAL NITEKREDSPLPSPSHRPMGRTPSGGQLRKMFTESQIGRSSFRKLLEPSISERPGSTP YRVVLGDVKEKLMNTRRRLELLLEDLPCDRDTSEYYDTSDKLLEPLLLCYQSLQSCGS SVLADGRLADLIRRVATFGMVLMKLDVRQESGRHTETLDAITSYLDLGVYSEWDEQKK LDFLTRELKGKRPLVPPYIQVTADVQEVLDTFRVAAELGSDALGAYVISMASNASDVL AVELLQKDARLTVSGDLGRPCPGGTLRVVPLFETVNDLREAGPAIRKLLSIDWYRDHI IKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNAFGIKVTLFHGRGGSI GRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTSVRQLEIYTTAVLLATL RPPQPPRDDKWRGVMEEISRVSCAQYRSTVYENPEFIKYFQEATPQAELGYLNIGSRP AKRRTTPGISNLRAIPWVFAWTQTRLVLPAWLGVGRGLQDACDKGHTHELRAMYEEWP FFQSTVDLIEMVVAKADAPMAKHYDDVLVHDAGRRTLGAELRQELARTENCVLAVSGH KKLSANNRSLRKLIDSRLTYLNPMNMLQVEVLRRLRQDDDNRKLRDALLITINGIAAG MRNTG</aaseq>

Gene Sequence

<dnaseqindica>8962..9789#8668..8874#8450..8576#8009..8097#7685..7783#6471..6617#6242..6343#5812..5937#5165..5380#4783..4844#3347..3475#2526..2667#2263..2358#2093..2169#1945..2023#1796..1864#1636..1713#1390..1504#316..479#91..246#aatcccaatcaatccctctctccatctggtgctctctatctgaggaatccgaatccgatcaggggaggcgaggcgcggcggtgatcggcgatgacggacacgacggatgacatcgcggaggggatatcattccaggcgttcgaggacgactgccggctgctgggcagcctcctccacgacgtcctcctccgcgagctcggcccccgcttcatccacctcctcgagcgcatcaccatcctcgcccaggtatcgtatccatccatatatgatgatgatgatgatggtgattcgatccaattaacacggtgcgtgcagagcgccgtcaacatgcgctccgccggggtggaggacaccgccgtcgtcgtcgagaagcagctcggcgccgagctggccgccatgtcgctcgaggactcgctctgcctcgcccgcgccttctcccaccacctcaacctcatgaccatcgccgacacttaccacaggtgcttgccctacacattcacattctcaaattgttttattaattaattggaggatcacctcttccgccgccattagaatctgcaaactcacttcataaatcatcataatgtgtttatcttaattactccctattaacctgaatttatcatgcatgtacggccctcaacacatttgttgtaccactccattttcagaatgtgctacataccattttttttgtctgaatatgtgttactacaacttactgctagtgatagtgaggactgcattatcatatttggcgcgaacaatttgaaagccaaacactgaatttacagtttgtttgtcacacttcaattaaagaatactgataacaacacgggagttgtcttctgtttggggtacctatttgtcatatttgggaaatataagtatacctgttcgtgatagggatgctacattacagtagcacagatgaatctttgattgcaatatggaatccaagaattccggtacatatgtgtacggcattacaaagtcggtccaccggttagttgtttccatgtgaccctcctcagacagaattgattgaaggaaccttacgctcgcacatggtagcttcattgtggtttcctcagatgttttgtcgtcagttgtccgactgtttttggaacctagcaaggccattgagcatcgcacttattgtcgcaattacctcttattatggtagtatgtcaagttttagaacagctgagacttcatgcatatgcttaagaaataattaccatcagcatgttgcagacttgcagtacatctttttcatttcaggaaaatgttagtgttgctacgttttttatcacctgaactagaatgtttaccaattttgaaaatcacccaaaatctagagcttggcatttttatgtcttttagggttcgtaaagcacgcaatttcgccgacctgtcgaaatcatgtgatgatacatttgccaaattgattcaaagtggtgttagcccggaagaactctatgacactgtatgcaagcaggtaatttctcacattaagcacacatttttcatacattgtatattatgaaagttgcacatcatcaaatttatctgtgtatcttgtaagaaagtcacacatgatcaaatttatcagatattcgacctttacaggaggttgaaattgttctgacagctcatccaactcaaatcaatcggcggactttgcagtacaaacaccttagaatagctgtgagttaatttcaatagtttcatacttcaaccttgatattgctattttgttgtttcaattaccgatgaaactgtgctgcagcaccttttggaattcaacgaacgtgctgatcttagcctcgaggataaagaaattctaattgaagatctggtataacttcaaaggatcttcatagttttatttttccttttcctaatgtgttccaatctttctaactttgaattatgtaggtaagagaaatcacggcaatatggcagactgatgagttgaggcgccataaacctacacctgttgacgaagctagagctggttagtaaccatctattttctgtttttgttactgccagtattctcatgattccatcttttcttttgtaggccttcatattgttgagcaatcgctctggaaagcaataccacactatcttcgccgtgttagcaatgctctaaagaaggtataaatacattgattggcatttgttgaattccacttccgtttgactcattcacgagcggatataaaccctcctacaatgcttttcttatagaacactggcaagccacttccgctcacctgcacaccaatcaaattcggttcatggatgggtggtgaccgtgatgggaatcctaatgtcacagcaaaagtaagatccacacatttgaatttggtcgttttattatgccttctcagtattcactagtatttcctgtacattcttatggtgtgttgcgtttttctaccttttgcttatgttaatttcgacatgatcaccattctgaaagactacaatgtttcatttctgagctgcaggttactagggatgtttccattttgtcccaatggatggcaattgatctgtacatccgggaactagacactctaagctttgagctatcaattaacagatgcagcgagaagcttgcaaacttagcaaatgacatcctgctcaaaggttatttcatgatatatccaagcttaatccatttcaatctcaacagaagctcgcctgccaccatgaattgtggcgcttttcgaatgcctagttagttagttagttcattagctagtataatgcatattattggttgtggtactgttccttaaacagtaaggtgcactgtaacagcactcttattatagggattgtaattttagtttatatattagatatttcctttcagtttataactatcttataggtccccttttattagttcctaccctttgggctctagcacctttttttttttttgacgctgaaaggtagagagactataccttataaccattttatttatggtgggtggggtactagcacctttatatgaagggacattgctctaattatcgggaagcaataaagaaataataagtttttccccacctcttgtctttattgatttattctcatctacagtatacacctcatcctttacatccctgtactgcctaaccaattaaccattgtctggatggtatttcccctattatcttacgatcattgcagcacatctctgtcatgtagaaataatcttgaatttgtttagaatagcctcacctattgtacatacatatttcagaaaataaaaactggctcattctatgttgatattttcaaatgaactctgcagaatcagcatcagaggaccagaagaccaatacctggaatcaaactggaccccagaacaatctaaagcttcagcacagcttggcccttcctgcacagcttccttctggtgctgatcttccatcatgtacaggtggactccttgttggaaactttatatgatgcatcatctaatatgtatttcacttaagttcacatcttcgggtcattgacttatactctctcagtttcatattataagacgctttgacttttttcctaatcaaacttctataagcttgaccaagtttatatagaaatgtagtaactcttataacaccaaattagttccattaaacctaatattgaatacattttcatagtatgtttgtttggtgttaaaaatgttgatatgtttttctataaacttggtcaaatttaaagaagtttgattaaggaaaaagtcaaaacatatcataatatgaaatggagggagtactagtttgcaccagcaattctattacttggtgaggcggactgacatgctgtagcattatgttaatataaaaaggtctaatgtttttgtaccaaatgcataatagtccaaggggagcagtcagcattatgttgttaggtctagtttttttgtaacaaaatccaaaatcctaatagcccaaggaagttttgtagttgcataaaatattttacaccaatttgtttggttactttcggcttcctgattttctatcacaatttatgtgttaaataagcaatacctaagttataatctggaaataataaaaacttattttatatttagaaccagtaggcttcattaatgaaactgaaaatgaatatagaggtgttcaagtcttacagtaacaaacttatttacttcttcacataagcgcattcatgacaccacatcgataaattttggggggaaaagtgctggatcattatttccgtattatgtctgacacaaatacctcatgctgtcatccttgtaatcaatgtaagacttgtgtcatcaactgctggattaaaccatgaaatttacattgcaacagcttcctctgttccccaaactggatctgaggaaaatttgtgcatactgcataggacaaaaaaattggacatgctattttgaaaattatttcagaatgccaatcaccatgtaaaatagtttcatcaatattaattaaagaacatcttttgtaacatggatttaacatcatgtatcatcaagttcatctgaaatagttcagatgtatgtaacatcttttgtaacatggatttaacatcatgtatcatcaggttcatcttttgtaactggtgtgtgtttgtacatatgtatgtaaatttattgtcacacctattaatgcattgctactattaatgtgatgtctatgtcttcccatgatttgctaatactgagagtagagcttgtatttgatgcagaatgcaacgatggggaatctcaaatcagaatgtcaaaacttccagggaatccaaagcataaggttaggacagctagaattttgtgatgtctcacacgttcgacttctttgttgtacagagatcattggaagcacaaactgtccataaaaatgcattggcacaactattccaatatgcgctacattttttttcaacgaacattgaaatgacatggagtgaaaaatgctatggagaagctatggcatcgccggtagaaatagcaaagaataaacaaacaaacaaacaaataaagaactagctgacactaactggatagtgtagataaatttcaatatatatttcttaacatttcatgagaattaatgcatgctgtgtctcctagttggctctaaacataacagaaaaacgtgaagacagtccattgccgtctcctagtcatcgcccgatgggtcgaactccaagtggaggtcaactaaggaagatgttcacagaatcccaaattggtcgatcgagcttccggaaacttctagaaccaagcatatcagagagaccagggagtactccttatagagttgtccttggtgatgtgaaagaaaaggttagagccatactttatcatttattatacgtctcatgttttcttctccggaagtaggcaaacaattgcctagtctactaatagaggttggattaagggatgcttgattaccaaatttgtacaatattctttaggattaaattaatctcactaataaattcccagagactctactcctgttctttggcaataaagtttgggataaattttatgtggcattttactattaaaaacatatatgccaaagatacccaaatagttggacataggtactctcaatctttggtaggaagacaaacctcaatgagaacaagaagagattatgctatgtataaacagtacccatctgttatatttttcttgacctgttatattttttttaacatggcaaaattttttccttttgattgtgcttaccactctgttttcagctgatgaacacacggagacgactcgagcttcttcttgaggatctaccatgtgatcgtgatacttcagaatattatgatacatcggataaacttttggagcccttgcttttgtgttatcaatcactggttagtctaattagctgatgtagggtcgatcactcatccctttagtgctgtactaccatgatcaactatattctatccgtgcaagtgtgtctgtgtgtgtgctagaaaaaaaaacatttgacacaaacattctcagcattcttcaaaattgccctttaccatctccacattcttactggctaggctttgattagtcgtgacttgtgagaacaatcgttgatgatggagtgggtggaggtttcttttcatcacataatttcctttttgtactgactgtgttcacatcttcaactattttatgaagcaatcatgtggatctagtgtgcttgcggatggccggttagcagatttgattcgacgggttgcaacctttggtatggtgttaatgaagcttgatgtacggcaggtgggcacattgatcactactgtttttatgcttactcacacttaaattttcctgatgtaacttcagaatagcttcaagcgaagtccagtagtccattaatgaatagaatggcgttatattactgtaggaatcaggccggcatacggaaacacttgatgccatcacatcttacctggatcttggtgtttatagtgagtgggatgaacaaaagaaactggatttcttgactagagagctgaaagggaagcgccctcttgtccccccatacatacaggtcagttgttgaatgtagacatcaaatttcctatcctagtggctaatgataacttatattttagttgtgataaatgttcgtttacatggaaaccagaagtgtcaattgagtttcatcgtgtggaacagtacaatataaatccttccatgcaaacaaacatttatcacaaactaaaaaatgctaccaatcttaccacaaattgaaacttatactacacaatcattttgtggtaagattggtagcattttttagtttgtgatgaatgtttgtttacatggaaacaggaagtgccaattgagtttcaatgtgtagaacagtatgatagaatccttcagaaacagatatagttcctttccatatagtcattttgtggtaagattggtatcacctccgccaacgccaaaatggttaatactatgctaacttctgatgaataagcaatgttttatacagaatttgatgaggcatcagatataacatcactgttcattcaacatggattttagtttttttgggaatacgcataagacttacatatctttttattaagattgaggggtggacttacaaacgcaaccgataaaggaagcaaaaacaagaacaccaggaaaagaaaaaaaaagaaagaaagaaagcacagcagagggtgttatttcgcaattaaccaattgtgcgactgaaacctagacgaggaggcttagatcggcacccccgcgcgccataggcttgcttcttcagcagccaagtttgccacttctccccaggatcggcgttggttgttgaaagcctggctattccgttccttccaaattgaccaggcgaccagaataatgatggtgtcaaagccgcgcctcttttggacatccaaccaaaatcccttatattttgggatggagtattttcttttacaagaaagatataggaaaagggattgcagtgttggtacataagaatatttgaatggcaactttatggttgcatacttcattgtagaagagaaaaagggaatggagattcaccttgaagtggaaagacttacatttgcatttcctttgtattcctttcaggttactgctgatgtgcaagaagttcttgatacattccgtgttgctgcagagttaggaagcgatgcacttggagcatatgtgatttcaatggcctcaaatgtatgtagatacgcaagtcttatgtagcactaaataataagaaaaatctgaatatccatcctgcactttagcgttcttgttaaccctcacctgtaaccggccggtggttccaagcattttgccatgtcatgccttgtaccatcttgatcgcatggatcaaatgacaatcgtggcacattatatttatcactctacattaaatatgatgtgttcctctggttgcaggcaagcgatgtcctagcggttgaactgttgcagaaggacgcaagacttacagtcagcggggacctaggaaggccatgtcctggtggaacgtaagtatgattatatatatatatatatatatatatatatatatatatatatatatatatatctcatatgttcagtgtgctactcgatcaattgaacttatgaactcccaattggttggtttagtagttacacaaaactaagaacaaagttgattgtgcaaactaagtagaaatggaaaagaaggaattgcgcactgtgtctctgagctagcaaggaaaattcgactgcgatcttttactttgccagtggctaagccaactgaacttgtttttgcaccatatagatcgtatattatgttttgtaccatggccagtgtttgattgaatagtgtgttatattgtttgtgaataggttgagagttgttccactgtttgagacggtgaatgatctgcgagaagccggcccagcgatcagaaagttactgtccatcgactggtacagagaccacatcatcaagaaccataacgggcaccaagaggtagaatgatcgatgggtttagtttcgaatatctcaaactcattttgcttttgtttcggatatctcaaactcgatcgggaggagtttgcaggtgatggtgggctactctgattccggcaaggacgccggccgtttcaccgcggcatgggagctatacaaggctcaggaagatgtggtggccgcgtgcaacgcgttcggcatcaaggttacgctcttccatggccgcggcgggagcatcggccgcggcggcgggccgacctatctcgccattcagtcgcagccacccggctcagtgatggtgagcactggcaggcactgattaatcagtccattccatgtgtatgtgtttgcgagctaataatgaattgaatggtgcatggtgcagggaactcttcggtcgacggagcaaggggagatggtgcaggccaagttcgggctgccgcagacgtctgtccggcagctggagatatacacgacggcggtgctgctggcgacgctgcggccgccgcagccgccgcgggacgacaagtggcggggggtgatggaggagatatcgcgggtgagctgcgcgcagtaccggagcacggtgtacgagaacccggagttcatcaagtacttccaggaggcgacgccgcaggcggagctgggctacctcaacatcggcagccgccccgcgaagcgcaggaccacgccggggatctccaaccttcgcgccatcccctgggtgttcgcgtggacgcagacgcggctggtgctcccggcgtggctcggcgtggggcgcggcctccaggacgcctgcgacaagggccacacccacgagctccgcgccatgtacgaggagtggcccttcttccagtccacggtggacctcatcgagatggtggtggccaaggcggacgcgcccatggccaagcactacgacgacgtgctggtgcacgacgcggggcggcggacgctcggggcggagctccggcaggagctggcgcggacggagaactgcgtgctggcggtgagcggtcacaagaagctgtccgccaacaaccgcagcctgcggaagctgatcgacagcaggctcacgtacctcaaccccatgaacatgctccaggtcgaggtcctccgtcgcctccgccaggacgacgacaaccgcaagctccgcgacgcgctgctcatcaccatcaacggcattgccgccggcatgcgcaacaccggctgactcctcttccctcctctcctctgcaaattaacttatatttcttgcaactatatttccgtctgaactaattaccggagttttttttctcgttcaattttccctcaaaataagaaagaaaccttgcatgtagcattttcacattggattggatatgtacattgcatggagaatgaaatagcattatagactatagtggtgtggattgatgtatgtagt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0110700, RefSeq:Os01g0110700