Os01g0112300

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Revision as of 04:17, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0112300| Description = Protein of unknown function DUF1664 family protein| Version = NM_001048347.2 GI:297595932 GeneID:4326118| Length = 3...")
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Gene Name

Os01g0112300

Description

Protein of unknown function DUF1664 family protein

Version

NM_001048347.2 GI:297595932 GeneID:4326118

Length

3502 bp

Definition

Oryza sativa Japonica Group Os01g0112300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:639721..643222

Sequence Coding Region

639959..640192,640290..640379,640972..641046,641643..641713,642243..642396
,642497..642573,643077..643113

Expression

GEO Profiles:Os01g0112300

Genome Context

<gbrowseImage1> name=NC_008394:639721..643222 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:639721..643222 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcttggcaacgtcgccatcctcgtcggctccggaattcttggatcagttcttgtaggtggtgatgccaaactccctagtgctggcgaggtactttctggtgctgccaagtttgtcaagaagcatggaaacgaagggaaagatacatcgtctaacaccgatgcacacaccgctcagctattatctcaggtcaaccatctcagacaggagatacaatctctaggctcaaggcctgttacagttgtcaccaatgctgctagatcaggacctggtacatttactataacagtggtggctgttgctggggctgttggctacgcctacattaagtggaaggtcacagtcatccatggggatcttagtgctttccaagaggatttacaatcagttaaccttgtagttcggagtctggtttcttcgttgcctcaatctactgctcttccagttctgccgacaaccacacctgcagctgaaccatcacctagggcagaggcaccacaggaggaacagtggggttttgtgagcagaacatcatcttgtagggaaggatcaggtcgttttcaggagcagcggagtgttgtgaccagaacgtcgtctattagggaaggatctcctgaatcttcaaatggagcctcatcctcaactggagcaagcacaggaacgaacacaagcacgagcagatttggtgggctgaggctgcctggacttgggtttcttgcaagttcgacgagatag</cdnaseq>

Protein Sequence

<aaseq>MGLGNVAILVGSGILGSVLVGGDAKLPSAGEVLSGAAKFVKKHG NEGKDTSSNTDAHTAQLLSQVNHLRQEIQSLGSRPVTVVTNAARSGPGTFTITVVAVA GAVGYAYIKWKVTVIHGDLSAFQEDLQSVNLVVRSLVSSLPQSTALPVLPTTTPAAEP SPRAEAPQEEQWGFVSRTSSCREGSGRFQEQRSVVTRTSSIREGSPESSNGASSSTGA STGTNTSTSRFGGLRLPGLGFLASSTR</aaseq>

Gene Sequence

<dnaseqindica>3031..3264#2844..2933#2177..2251#1510..1580#827..980#650..726#110..146#aatctgtccttcctctcgccggccccgtctcctcttcccccgccgccaccgccgccgccgccgcctctagattaaagcagagctacagccaggaggggcgcgcgccgccatggggcttggcaacgtcgccatcctcgtcggctccggtgagtccccctcccccccccttccgccgtctgctccctcctcctgaggtccacccgcgcacgcgcagccctagcttctcgtcgcccagccggttgactttcgagttcgagattgatactagatagatagatagatgctacttgcaaccatggcgcaggcgccaaaccaatcccactgccaaatcccatcttcttttttttttttgagaaatcccatcttcttgtattatttgctttagcagattccaatacatagattgatttagccttttagggccggggtttgtttagttcaactaagctttctcttcaaaccaggtggtttcataggaacttattaggtatcccactgctacatctgtcaaatccccccaacttattgcccatctaatatcatagggtgtatatacttaccggcttccccagtacataggcccttccactaaagaactaagtactagttttactcggtaccaatgtttatgctgtttgcttgcctgcaggaattcttggatcagttcttgtaggtggtgatgccaaactccctagtgctggcgaggtactttctggtgctgccaaggtatggtaccttattgcccccatgccctaactatcaacccaaaatactactgctatatatgttataactcaccgtcacatgattcttttccccctcttagtttgtcaagaagcatggaaacgaagggaaagatacatcgtctaacaccgatgcacacaccgctcagctattatctcaggtcaaccatctcagacaggagatacaatctctaggctcaaggcctgttacagttgtcaccaatgctgctagatcaggtaagttcctgctgactagttactatgttttagttattgacttatgcgtgagacacagatcatacaaacataaattttcacatgacactatactttgtatacgccccaatgtcgacatctttgctaagaattaatgcgattttagagtgttagatatttctattaccttttgatttttttcagacttggtctgttgtttttatatctacatgttcgacagagctacaattgcattgtctgttcatatatagagtataccattttgcgattcagatgttcacatgttcttttctttttctttccttattattatttgtcatggtcttggctgggatactatgcactgctgattatcattatgttgttcactgcattataaaggttcttggacatgtgaaagtttttatagttattgctaataaactttcatcatgctcttttgcctttaaacatacacaattacatatggttacacacattctttctcaaatttccttaaacgacattcatgtaaatcctttttctgtaggacctggtacatttactataacagtggtggctgttgctggggctgttggctacgcctacattaagtggaaggtaatgtttgattctttcacctcaatgggagtacagaatgaggaggacataatctttgattattctagttgctattttgatgtttattgttctgtcattctagatcatggatgcaagtgcatattattacaatcctatctgcttgccatttcttgtttcgccgttctagctagtttctaaagttacattgatttgcagggctggaaactttctgatttgatgtttgtcacgaagcgtggcttatccgatgcttgcaatgtagttggcagccaattggacaaggtttcagatgatgtcactgtaagtttttaacttctttcagcaacgctgcactcaaacgtgttacttgtaattccatgttttcattgttccaaccaaaacatcttactggcctttgattttcactattcagtctgcaaggaaacatctcgctggaaggattgatcgtgtggatatcagtttagatgaaacacaagaaattattgaagggacaagggatgaggttggaactgtttttccttttattttttgggtttacttttatagtttttgatgcattttcagcgacctaatggcatttcatgactgacttgtaggtcacagtcatccatggggatcttagtgctttccaagaggatttacaatcagttaaccttgtagttcggagtctggtatgtacctcatactggaacagattctaccttatttactgaatatccagatttctaccttattaactgatgaatattactcatgtacttttattgtatcttgtatcatgcaggaatcaaagctcgtgagtctggaatacacccaggtgagtagaaagctctttttttaaaggaaaagtagaagctcatattaccactacaccaactaactcgtcgacatgctcctaatgctatcttcttgaaatcctgttaggatcgtacggctaatggaatatctgacttggttgagttcacccagaaagccactattcgtcaggcaagtttgaatgatctagtgattcattaatgccatgcttcttcaatactttatttaacaaaaccagttgcacctcaactatttgcatattctcttcctatatgcttattctgaagagatgttttgattttcaggtcccagcagcatccgttcctccagctattggatcttcagagctagttgttaggagggtaaaggcttgcacctttcccagctttgtcatggtcgggacatgccccagtttgttgactttggtacctgtgtttccggttgcaggtttcttcgttgcctcaatctactgctcttccagttctgccgacaaccacacctgcagctgaaccatcacctagggcagaggcaccacaggtgtggtttcagtttgatgttgcactttgttgtttgcaatttcagtttcctcttgcgctttccatgattgaaacgagctgttgctggacttttgcaggaggaacagtggggttttgtgagcagaacatcatcttgtagggaaggatcaggtcgttttcaggagcagcggagtgttgtgaccagaacgtcgtctattagggaaggatctcctgaatcttcaaatggagcctcatcctcaactggagcaagcacaggaacgaacacaagcacgagcagatttggtgggctgaggctgcctggacttgggtttcttgcaagttcgacgagatagttgatgaggtgtttttatttaagttaaaagatggtgctgccaggagctctccattgctttacttgtagttttaggttgtactagtaggagagaagagataacactagcagtgatgtgatggaacaacacatatgcgtgcggggctgggctcctttgttcttgaggaggccaaatttttgtagaaaaaaaagagaggaaaacatgtgctcctatctatctatctatctatctatctata</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0112300, RefSeq:Os01g0112300