Os01g0114500

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Revision as of 04:17, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0114500| Description = Similar to LRK14| Version = NM_001048365.1 GI:115434143 GeneID:4326108| Length = 2983 bp| Definition = Oryza sativa...")
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Gene Name

Os01g0114500

Description

Similar to LRK14

Version

NM_001048365.1 GI:115434143 GeneID:4326108

Length

2983 bp

Definition

Oryza sativa Japonica Group Os01g0114500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:780442..783424

Sequence Coding Region

780442..781273,782514..783424

Expression

GEO Profiles:Os01g0114500

Genome Context

<gbrowseImage1> name=NC_008394:780442..783424 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:780442..783424 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtagcaaattcctcgccatatatctcctgcttgctttcctcagccatggcacctgcagctacatggccaccacagcttcaggctgggatgaccacgacttcttcaggcattgtccaccgtcccggtgcagcaaggatggaccagagatccgtttccctcaccggcttgaatccagcaatacatcatcagcatgccgcgcttcatgcgcgaggctagcatgctctggccaagacaccatcctacatcacccaattctggggccttgcaaggtcacctccatagattacaaggaggccgtcatcaacatcatccatctccttccgtttccatgccctctccagaagctcatggtcgacagtttaccgcctgatgactaccatggctgtaacttatacaggaggattcctgcaaaaatagtaagctgctcaaaagagtttacaccaagtggtacctctccagttccgtacgaacttgaccatctccagaatgctgccgaaaatatcttcggcccaatatcctgccttagcggcacaggacagtacttctcatatttggtgcatgctcagctatacatgtatttgcttccattggattgcaggatcgtctccagaggctccattccaattcctggctcagactcctgcagtggcccaacgttcaaggaaaaagcagaaaaattcatcaactttgctgagacgactgtcagttgggggtcctttcaagatggagttctcgacaactgcatggcgtgtgaacgtcaaaagcaactctgtgcattcagctcacgaaggaatcaaacattctgcacaagccacggcaatcatcatgctacatcatcggtagccgcatttgttgttttttcgttcatcatggccacagcactctatctttcactgaagtcaaggtatgatgaagaggtacatttgaaggttgaaatgttcctcaggacatatggcacatcgaagcccacaaggtacagtttctctgatgttaagaagataacgagacgcttcaaggaacaattaggtcagggtggatttggaagtgtatacaaaggacgactaccaaacggagtgcctgtggcagttaaaatgatagaacactctacaggaaatggagaagagttcatcaatgaagtagcaacaattggacaaattcatcatataaacattgcccgccttctgggattctgctctgaaggaacacggcacattcttatctatgaattcatgcctaatgaatcattggagaaatgcatattcttgcatgaccctaatacttctcaagaactcctagcaccaaaaaagatgttagatgttgccttaggcattgcccgaggaatggagtatcttcatcaaggatgcaaccaacgcatcctccattttgatatcaagcctaataatatattgcttgactataacttcaatccgaagatttcagactttggtcttgcaaagctgtgtgcaagggaccaaagcattgttaccttgaccaaagcaagaggcacgatgggctacattgcaccagagctatattctaggaactttggggagatatcttacaagtcagatgtatatagttttggcatgcttgtgttagaaatggtgagtggaaggagaaactcagacccgagtattgagaaccaaaatgaggtctactttccagagtggatctatgagaaagtaattactgagcaggactttgtacttagtagggaaatgacagaagaagtagactga</cdnaseq>

Protein Sequence

<aaseq>MSSKFLAIYLLLAFLSHGTCSYMATTASGWDDHDFFRHCPPSRC SKDGPEIRFPHRLESSNTSSACRASCARLACSGQDTILHHPILGPCKVTSIDYKEAVI NIIHLLPFPCPLQKLMVDSLPPDDYHGCNLYRRIPAKIVSCSKEFTPSGTSPVPYELD HLQNAAENIFGPISCLSGTGQYFSYLVHAQLYMYLLPLDCRIVSRGSIPIPGSDSCSG PTFKEKAEKFINFAETTVSWGSFQDGVLDNCMACERQKQLCAFSSRRNQTFCTSHGNH HATSSVAAFVVFSFIMATALYLSLKSRYDEEVHLKVEMFLRTYGTSKPTRYSFSDVKK ITRRFKEQLGQGGFGSVYKGRLPNGVPVAVKMIEHSTGNGEEFINEVATIGQIHHINI ARLLGFCSEGTRHILIYEFMPNESLEKCIFLHDPNTSQELLAPKKMLDVALGIARGME YLHQGCNQRILHFDIKPNNILLDYNFNPKISDFGLAKLCARDQSIVTLTKARGTMGYI APELYSRNFGEISYKSDVYSFGMLVLEMVSGRRNSDPSIENQNEVYFPEWIYEKVITE QDFVLSREMTEEVD</aaseq>

Gene Sequence

<dnaseqindica>1..832#2073..2983#atgagtagcaaattcctcgccatatatctcctgcttgctttcctcagccatggcacctgcagctacatggccaccacagcttcaggctgggatgaccacgacttcttcaggcattgtccaccgtcccggtgcagcaaggatggaccagagatccgtttccctcaccggcttgaatccagcaatacatcatcagcatgccgcgcttcatgcgcgaggctagcatgctctggccaagacaccatcctacatcacccaattctggggccttgcaaggtcacctccatagattacaaggaggccgtcatcaacatcatccatctccttccgtttccatgccctctccagaagctcatggtcgacagtttaccgcctgatgactaccatggctgtaacttatacaggaggattcctgcaaaaatagtaagctgctcaaaagagtttacaccaagtggtacctctccagttccgtacgaacttgaccatctccagaatgctgccgaaaatatcttcggcccaatatcctgccttagcggcacaggacagtacttctcatatttggtgcatgctcagctatacatgtatttgcttccattggattgcaggatcgtctccagaggctccattccaattcctggctcagactcctgcagtggcccaacgttcaaggaaaaagcagaaaaattcatcaactttgctgagacgactgtcagttgggggtcctttcaagatggagttctcgacaactgcatggcgtgtgaacgtcaaaagcaactctgtgcattcagctcacgaaggaatcaaacattctgcacaagccacggcaatcatcatggtactaactatcctaactgcacaaacatgatcgtaccacccagctttgttcctgaactagttttctactcttactatgattcaagcattcagccatacagtactagtgcaccgctctcaatacatatgctcaaaactatttttgcaggctagtagcctactactagaaatcatttagggaactaactagcttcatcaaacatttttgcacaattgccataaaagtgtcacaatatttagtaaaataatgatagaattatcttgatcaactagcagcagttggacgatacatgacattaaagatcataaaacctgggacttctcaaagatatttgctagaattgatattgtctatgaacttattgagactgcctctataagacttccttatggtttcctctagaagtagaaagtagctcgaatatgtaaacaagactgcaagggaacacttgactgggacaagatataatctaagtttttttttatttttttgccaggtcggcgaaaggaagccgaccaaaattcattaagataaaggaataattacagaggtatacacgatataatctaagttttggtttgttacctgatataacaggagctgcagttagatctttggttgctttgataatagattagtagacatgggaggtgatatgtggaagcctttataatttagcccataacccacctcaactcatcctaatcatccttatctggcatgacaaaaatacgagagttagcacacagaactgtcttatgatgatactgcaaaataagatgtaaggaaaatttcactattgcaaatatattcatatgatcatggtgcataaaaatttagagccaaaactctatcctaccccaccagggccatgttcgctgatacattttgttggattgctctgtttttattttcaagatgtaattatccattatctgttaaaaccaccaaccagaacttattatcttcgttcatacttgcaggttagcgtgtgaaagtcatttcaggtactgcagtactcaaacctacctttctattaaaaagagaaaagaaacaatgttatcagtacatataaattcttattgctagcagttctgagtcttctgactcagcattcttctgctaaaaaagacaccacctgctcttacagtacccatcaggcaatcacaatcagttgattactagccacaactttcgatcctaatgcaatgtgctaatttccccttctctgttaattcagctacatcatcggtagccgcatttgttgttttttcgttcatcatggccacagcactctatctttcactgaagtcaaggtatgatgaagaggtacatttgaaggttgaaatgttcctcaggacatatggcacatcgaagcccacaaggtacagtttctctgatgttaagaagataacgagacgcttcaaggaacaattaggtcagggtggatttggaagtgtatacaaaggacgactaccaaacggagtgcctgtggcagttaaaatgatagaacactctacaggaaatggagaagagttcatcaatgaagtagcaacaattggacaaattcatcatataaacattgcccgccttctgggattctgctctgaaggaacacggcacattcttatctatgaattcatgcctaatgaatcattggagaaatgcatattcttgcatgaccctaatacttctcaagaactcctagcaccaaaaaagatgttagatgttgccttaggcattgcccgaggaatggagtatcttcatcaaggatgcaaccaacgcatcctccattttgatatcaagcctaataatatattgcttgactataacttcaatccgaagatttcagactttggtcttgcaaagctgtgtgcaagggaccaaagcattgttaccttgaccaaagcaagaggcacgatgggctacattgcaccagagctatattctaggaactttggggagatatcttacaagtcagatgtatatagttttggcatgcttgtgttagaaatggtgagtggaaggagaaactcagacccgagtattgagaaccaaaatgaggtctactttccagagtggatctatgagaaagtaattactgagcaggactttgtacttagtagggaaatgacagaagaagtagactga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0114500, RefSeq:Os01g0114500