Os01g0115600

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Revision as of 04:17, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0115600| Description = Similar to LRK14| Version = NM_001048371.1 GI:115434155 GeneID:4326086| Length = 3870 bp| Definition = Oryza sativa...")
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Gene Name

Os01g0115600

Description

Similar to LRK14

Version

NM_001048371.1 GI:115434155 GeneID:4326086

Length

3870 bp

Definition

Oryza sativa Japonica Group Os01g0115600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:842530..846399

Sequence Coding Region

842543..843311,844964..844987,845202..846274

Expression

GEO Profiles:Os01g0115600

Genome Context

<gbrowseImage1> name=NC_008394:842530..846399 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:842530..846399 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacttgccaaaacttctcttcacagtactcatactctctcttctcaactacgaatcctcttccgccacagcatgggatgatgaagatttcttcaagacttgctcatcacacaggtgcagcaagcatggaccagagatcaggttccctttccggctctcgacacaacctccatcatgcggcgcacccggcatgcacttgtcatgctctggacaggacaccatcctcaatcacccagttcttggtccctgcaaagtaaccgagataagttacagttatgctaccatgaacgtcatcccacctgtagattcctcacctcactgcccacttcagaagctcatgtcgaaaaaccaatcaacttctgtgtacaaacctcaaggtcctcaatcgcagggagctacccttgtagtttgttcaagagatcccatacctgcaaatcaatacgacatagttggcccaatatcttgcctcggccataataaccagttctggtatttggcagatccctatacatacatgtctgttcttcccttggactgcacagttatttctaaaggcatcccaatgccctatagttatgataaaaaagggagaataaactgggacacctcaaacttcaaggaaacagcaaatagagtcatcaacgatggtgagacagtattcatgtggtactctagtaacattactagtatttgccaacgatgtgaatatgaaggccgaccctgtggtttcagttcacaaagtggtcaagcattctgtcggcgtcatggaccgcgggtcactcttgttgcagctacatcatctgtagccacatttgtaattctttcattagttgtggccactgcattctacatctccttaaagtcaaggtacaacaaagagatacatttgaaagttgaaatgtttctcaagacatatggcacatccaagcccatgaggtacactttctccgatgttaagaaaataacaagacggttcaagaataaattaggccatggtggatttggaagtgtctacaaaggtgagctaccaaatggagttcctgtggcagtcaagatgctagagaactccttaggagagggagaagagttcatcaatgaagttgcgaccattgggagaattcaccatgcaaacatcgtccgtctcctaggattttgctctgaaggaacacgacgggctttaatatatgaattcatgcccaatgaatcgttggagaaatatatattctcaaatggttctaatatttcaagagaattcctagtaccaaagaaaatgctagatattgctttaggcatcgcccgaggaatggagtacttgcaccaagggtgcaatcagcgcattctccattttgacatcaagcctcacaacatattgttggactacagcttcagtccaaagatctcagactttgggcttgcaaagttgtgcgcaagagatcaaagcattgtcacattaactgcagcaaggggcacgatgggttatattgcaccagaactatattctcggagttttggagcaatatcatacaagtcggatgtctacagtttcggcatgctggtgttagaaatggtgagtgggaggaggaacacagacccaaccgttgagaaccaaaatgagttctactttcctgagtggatatatgagagagtaatcaatgggcaggaactggtgcttaacatggagacaacacaaggggagaaagaaacggttagacagctagccattgtagcgttatggtgcattcagtggaacccaacaaaccggccctcgatgacaaaggtagtaaacatgttaacggggaggttgcagaaactacaggtgccgcctaagcccttcatttcgtctgaaaatcatcttgcgacttag</cdnaseq>

Protein Sequence

<aaseq>MDLPKLLFTVLILSLLNYESSSATAWDDEDFFKTCSSHRCSKHG PEIRFPFRLSTQPPSCGAPGMHLSCSGQDTILNHPVLGPCKVTEISYSYATMNVIPPV DSSPHCPLQKLMSKNQSTSVYKPQGPQSQGATLVVCSRDPIPANQYDIVGPISCLGHN NQFWYLADPYTYMSVLPLDCTVISKGIPMPYSYDKKGRINWDTSNFKETANRVINDGE TVFMWYSSNITSICQRCEYEGRPCGFSSQSGQAFCRRHGPRVTLVAATSSVATFVILS LVVATAFYISLKSRYNKEIHLKVEMFLKTYGTSKPMRYTFSDVKKITRRFKNKLGHGG FGSVYKGELPNGVPVAVKMLENSLGEGEEFINEVATIGRIHHANIVRLLGFCSEGTRR ALIYEFMPNESLEKYIFSNGSNISREFLVPKKMLDIALGIARGMEYLHQGCNQRILHF DIKPHNILLDYSFSPKISDFGLAKLCARDQSIVTLTAARGTMGYIAPELYSRSFGAIS YKSDVYSFGMLVLEMVSGRRNTDPTVENQNEFYFPEWIYERVINGQELVLNMETTQGE KETVRQLAIVALWCIQWNPTNRPSMTKVVNMLTGRLQKLQVPPKPFISSENHLAT</aaseq>

Gene Sequence

<dnaseqindica>14..782#2435..2458#2673..3745#gccattacactccatggacttgccaaaacttctcttcacagtactcatactctctcttctcaactacgaatcctcttccgccacagcatgggatgatgaagatttcttcaagacttgctcatcacacaggtgcagcaagcatggaccagagatcaggttccctttccggctctcgacacaacctccatcatgcggcgcacccggcatgcacttgtcatgctctggacaggacaccatcctcaatcacccagttcttggtccctgcaaagtaaccgagataagttacagttatgctaccatgaacgtcatcccacctgtagattcctcacctcactgcccacttcagaagctcatgtcgaaaaaccaatcaacttctgtgtacaaacctcaaggtcctcaatcgcagggagctacccttgtagtttgttcaagagatcccatacctgcaaatcaatacgacatagttggcccaatatcttgcctcggccataataaccagttctggtatttggcagatccctatacatacatgtctgttcttcccttggactgcacagttatttctaaaggcatcccaatgccctatagttatgataaaaaagggagaataaactgggacacctcaaacttcaaggaaacagcaaatagagtcatcaacgatggtgagacagtattcatgtggtactctagtaacattactagtatttgccaacgatgtgaatatgaaggccgaccctgtggtttcagttcacaaagtggtcaagcattctgtcggcgtcatggtattttttctctctctttttgaagcacaaaccccatatcattatggtgacttgtttcattttcgaatagcattcaatattttttttccaattctcagtacgttagttatccaatcttctatattctaatacagtgatttcaagctcgatgcaatattttcaccttgcaatcaaacagtttagcaaaagtgaaggtgtactgtgaatcacttgattgctagcttggatgaacattttagctctaggttcacatccgtaatgttctaacagaagcccctgcaaagagatgacagtgtctaaaataattaaataataattttccctttttctttcgcttcaaaccaaagtaactgttcaaaatagtgctttgttgtacacagattacggtgcactaatgaaaattcacaaactgtacaacgttacatagaagtattaacattcataaatgtttatctatactaatataaaagatggtagtggtggtggtgagtctgccaccaccaccagccaactaccatgcgggacccacgaaatgtgagataaaactttgattgtttcgtaacccccacatgccatagaccccgtcgaaaggaaaatatgacaatagaatattatggaatttttcatctttgcgaaatggcagcaaaattagcacaataataatatactagacaattagaaaaaacccgttgcaatgcacggacattatgctagtatgatataacactgttctctgtatttcagcaaaaacaaaaaaaagaaaagaaaaacatatgtacaatccatttgatggacctgaatttatgtgacaactccaataacttataagacaagttgaaagttaatattactacagtaggaaacaataatgtaccagtatcatatagactatgactctatgagcagagagattatatggtgccaacagagtagagatctcacttgataatgcagtgataaggggtatgtggtttcaaccccgaggtcccgtgttcaatccccagtatgctcacaatttcttcttaaaaattttttggagggacgtctctccctccaaatctccttttttttttgggtgctaacagagtagaatccagaacatgctttgcagactgcagtgatctgtgagatcattatattagatattccatccttctaaataatttaaactaaagcatttctctttttatggttggttaagataagaatcctccctcccatcctattcccttttatgactactagctaaatgcccgtgctttgctgcggataaaaggaaaaatataacaatattttataacataaataaatcatattttccatgaaatatgttatccacatttcccctataggaaaatgtgggctatccacattaattttatatgtggctatccatttagatttagttgttatgtaatattaaaaagttcaaagggtaatatgtaaaacttgtaataggagtaggtgggtggaaaattcactgccaccaccattggaatctttttaaaggagtatagatacccatgcaagttttaaaattctatacagcaagccatataaaaatctggaatcagttttacttttattttaaaaaaacatcctttttatatacaaatcaagggaatactaattctctttctttctacatgcaggaccgcgggtcactcttgttgcaggtaaggaaataactcaatcttttgtccattctgcatgaaatttcaattaaatgccacccaatttatgaactttcaacaaagagagtgtatatattttctaatccaaataagaaatgccatgattatcttgacaataaaggcacatctggaaaataaattacagaattatgtcatctccaaatgcagctaactaactttcttatttttcaatcagctacatcatctgtagccacatttgtaattctttcattagttgtggccactgcattctacatctccttaaagtcaaggtacaacaaagagatacatttgaaagttgaaatgtttctcaagacatatggcacatccaagcccatgaggtacactttctccgatgttaagaaaataacaagacggttcaagaataaattaggccatggtggatttggaagtgtctacaaaggtgagctaccaaatggagttcctgtggcagtcaagatgctagagaactccttaggagagggagaagagttcatcaatgaagttgcgaccattgggagaattcaccatgcaaacatcgtccgtctcctaggattttgctctgaaggaacacgacgggctttaatatatgaattcatgcccaatgaatcgttggagaaatatatattctcaaatggttctaatatttcaagagaattcctagtaccaaagaaaatgctagatattgctttaggcatcgcccgaggaatggagtacttgcaccaagggtgcaatcagcgcattctccattttgacatcaagcctcacaacatattgttggactacagcttcagtccaaagatctcagactttgggcttgcaaagttgtgcgcaagagatcaaagcattgtcacattaactgcagcaaggggcacgatgggttatattgcaccagaactatattctcggagttttggagcaatatcatacaagtcggatgtctacagtttcggcatgctggtgttagaaatggtgagtgggaggaggaacacagacccaaccgttgagaaccaaaatgagttctactttcctgagtggatatatgagagagtaatcaatgggcaggaactggtgcttaacatggagacaacacaaggggagaaagaaacggttagacagctagccattgtagcgttatggtgcattcagtggaacccaacaaaccggccctcgatgacaaaggtagtaaacatgttaacggggaggttgcagaaactacaggtgccgcctaagcccttcatttcgtctgaaaatcatcttgcgacttagatcatggaaacacaattccatggtttagagatatgtttgatcgatccgtagcttgtatgtatggtgtaagattattcaactatattgtgctatcagacatatggtatatgtattcatgcaattct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0115600, RefSeq:Os01g0115600