Os01g0116400

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Revision as of 04:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0116400| Description = Protein kinase-like domain containing protein| Version = NM_001048378.1 GI:115434169 GeneID:4326093| Length = 2553 b...")
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Gene Name

Os01g0116400

Description

Protein kinase-like domain containing protein

Version

NM_001048378.1 GI:115434169 GeneID:4326093

Length

2553 bp

Definition

Oryza sativa Japonica Group Os01g0116400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:920078..922630

Sequence Coding Region

920271..921391,921519..921682,921834..922582

Expression

GEO Profiles:Os01g0116400

Genome Context

<gbrowseImage1> name=NC_008394:920078..922630 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:920078..922630 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggtgcgtttcgtcgttctgctgccctgcaggccatggctgccttctctgtgcttgcacttgttgtaccagatcaggttcaggggagaggcaagtgcccatctttctcctgcggacgtcttagctatgtgcatttcccattccgtcgtcaaggcgaccccgctgaatgtggtgttccatcatatgagctgacttgtgcagacagcaatgctacaattcagatcgacaaggcaacatacttggtaactgacatcaactacagtgatcagtacttctgggtggtcgatgcaagcttggattcagctaacaactgccctcttcctcggtggagtcagactccttataatgaaaactacaggcttggagaagattcacaccgccgtgtccaagtccagttgtcccctgatgtggattggttcgctacctttgtgaaatgctcgcaggaaatgaatagcagcaatgtcatgtacaggcctgtggcttgccggagcggcaactcttctttcgtctatgtgctaactggtctgggatcttatttagctgagaaccttgagccttcctgtggatacctggcaatgactcctttagctctgggtggtctagagaattggcgaactgctactgcggctgcgacactggaggatgtaaattatgaagatgttgtcagatccatgagtgaaggattcgctgttcgttttcctttcaggtctgggggattcatcgactgcctaaggggcttgatcagcgacagtaatggagaaccgacagtatatcggatcttcgtcattgttactaatatcaattcttacttctcgatatgcggccgccatgcaactcaacttccacacccttttgttgtgctcctgatgttagtgccacaaactttctggattttaagggtcatttctgcatgcaggttcgtcctggtgatgctgctgatgtggacctccgttgcctacatgtactggaaaataaagatgagagttgatgaagtagagaagtttctgcaattgcaacaaatgctgaccccaacgagatactcctacaccgacattattgccatcacaagtcattacagagacaagcttggccaaggaggatatggctccgtctacaaaggtgtgctactccctggtgatgtccgagttgccattaagatgctgaagggtgacgcaaattgcaaaggggaagagttcatcagcgaggtctccaccattggtaggatccaccatgtcaatgtggtgcgactcgtcgggttctgctctgaagaaataagaagagcgcttgtgtacgagtatatgcctcagggttctcttgacaagtacatcttctcgtctgaaaagagtttctcctgggataagctaaatgaaattgcattgggcattgccagagggatcaactacctgcatcatgggtgtgatatgcaaattctacactttgacatcaaaccgcacaacatccttcttgacaacaactttgtcccaaaagttgccgattttggccttgcaaagctgtacccaagggacaagagttttgtcccagtgagcgcagcacgaggaacagtgggatacatagctcctgagatgatctctcggggttttggtgccatatcaagcaagtccgatgtttacagcttcgggatgctactattggagatggccggaggaagaaggaatgctgatccgaatgcggagaattcaagccaggcatactatccatcacgagtgtaccgtcagctgacccgacaagaaacaggtgagatcaccgctgccgccgacatgcatgagttggagaagaagctctgcatcgttggattgtggtgcatccagatgaggtcttgtgaccgaccgatgatgagcgaggtgatagagatgcttgaaggtggtgttgattgtttgcaaattcctcctaggccattcttctgtgacgatgactacatcccggcaatggagtcgctgtatctgtcctccgaggtggagctggctgcaatctccgaggaggaagacgagagtatcactgagttgaattag</cdnaseq>

Protein Sequence

<aaseq>MAGAFRRSAALQAMAAFSVLALVVPDQVQGRGKCPSFSCGRLSY VHFPFRRQGDPAECGVPSYELTCADSNATIQIDKATYLVTDINYSDQYFWVVDASLDS ANNCPLPRWSQTPYNENYRLGEDSHRRVQVQLSPDVDWFATFVKCSQEMNSSNVMYRP VACRSGNSSFVYVLTGLGSYLAENLEPSCGYLAMTPLALGGLENWRTATAAATLEDVN YEDVVRSMSEGFAVRFPFRSGGFIDCLRGLISDSNGEPTVYRIFVIVTNINSYFSICG RHATQLPHPFVVLLMLVPQTFWILRVISACRFVLVMLLMWTSVAYMYWKIKMRVDEVE KFLQLQQMLTPTRYSYTDIIAITSHYRDKLGQGGYGSVYKGVLLPGDVRVAIKMLKGD ANCKGEEFISEVSTIGRIHHVNVVRLVGFCSEEIRRALVYEYMPQGSLDKYIFSSEKS FSWDKLNEIALGIARGINYLHHGCDMQILHFDIKPHNILLDNNFVPKVADFGLAKLYP RDKSFVPVSAARGTVGYIAPEMISRGFGAISSKSDVYSFGMLLLEMAGGRRNADPNAE NSSQAYYPSRVYRQLTRQETGEITAAADMHELEKKLCIVGLWCIQMRSCDRPMMSEVI EMLEGGVDCLQIPPRPFFCDDDYIPAMESLYLSSEVELAAISEEEDESITELN</aaseq>

Gene Sequence

<dnaseqindica>1240..2360#949..1112#49..797#attgtaataggcttgtttgcactgcctgtgaagctagctaccgtagcgatggctggtgcgtttcgtcgttctgctgccctgcaggccatggctgccttctctgtgcttgcacttgttgtaccagatcaggttcaggggagaggcaagtgcccatctttctcctgcggacgtcttagctatgtgcatttcccattccgtcgtcaaggcgaccccgctgaatgtggtgttccatcatatgagctgacttgtgcagacagcaatgctacaattcagatcgacaaggcaacatacttggtaactgacatcaactacagtgatcagtacttctgggtggtcgatgcaagcttggattcagctaacaactgccctcttcctcggtggagtcagactccttataatgaaaactacaggcttggagaagattcacaccgccgtgtccaagtccagttgtcccctgatgtggattggttcgctacctttgtgaaatgctcgcaggaaatgaatagcagcaatgtcatgtacaggcctgtggcttgccggagcggcaactcttctttcgtctatgtgctaactggtctgggatcttatttagctgagaaccttgagccttcctgtggatacctggcaatgactcctttagctctgggtggtctagagaattggcgaactgctactgcggctgcgacactggaggatgtaaattatgaagatgttgtcagatccatgagtgaaggattcgctgttcgttttcctttcaggtctgggggattcatcgactgcctaaggggcttgatcaggtgagtcaatttatttgggacttaaaactgaacactttggcccgtcttccttgtacattcttgatagtgaaatttaccaatgccaaataacattatcttggaaatttgctttgctgtacaatggctcatgcatgacatcgtggtcttgcagcgacagtaatggagaaccgacagtatatcggatcttcgtcattgttactaatatcaattcttacttctcgatatgcggccgccatgcaactcaacttccacacccttttgttgtgctcctgatgttagtgccacaaactttctggattttaagggtcatttctggtacgtgacaatcacacatatcaaatttcagttacattttcctttttcgctgtattgtagtctcgtcatgctctatttgttcatacacttggtctctacagcagggatgaacatgtttatggtgtagcatgcaggttcgtcctggtgatgctgctgatgtggacctccgttgcctacatgtactggaaaataaagatgagagttgatgaagtagagaagtttctgcaattgcaacaaatgctgaccccaacgagatactcctacaccgacattattgccatcacaagtcattacagagacaagcttggccaaggaggatatggctccgtctacaaaggtgtgctactccctggtgatgtccgagttgccattaagatgctgaagggtgacgcaaattgcaaaggggaagagttcatcagcgaggtctccaccattggtaggatccaccatgtcaatgtggtgcgactcgtcgggttctgctctgaagaaataagaagagcgcttgtgtacgagtatatgcctcagggttctcttgacaagtacatcttctcgtctgaaaagagtttctcctgggataagctaaatgaaattgcattgggcattgccagagggatcaactacctgcatcatgggtgtgatatgcaaattctacactttgacatcaaaccgcacaacatccttcttgacaacaactttgtcccaaaagttgccgattttggccttgcaaagctgtacccaagggacaagagttttgtcccagtgagcgcagcacgaggaacagtgggatacatagctcctgagatgatctctcggggttttggtgccatatcaagcaagtccgatgtttacagcttcgggatgctactattggagatggccggaggaagaaggaatgctgatccgaatgcggagaattcaagccaggcatactatccatcacgagtgtaccgtcagctgacccgacaagaaacaggtgagatcaccgctgccgccgacatgcatgagttggagaagaagctctgcatcgttggattgtggtgcatccagatgaggtcttgtgaccgaccgatgatgagcgaggtgatagagatgcttgaaggtggtgttgattgtttgcaaattcctcctaggccattcttctgtgacgatgactacatcccggcaatggagtcgctgtatctgtcctccgaggtggagctggctgcaatctccgaggaggaagacgagagtatcactgagttgaattagctagtactagcaagtatggtgtgttgatgtcttttcgtgagcaggttgtgctcaagcctgtgatgattgtagacagtcacacagatgcagtttctatgctcctattcctatattcctgtagaatgcgtatatgtgggcttgtacgatttattatcttgtgcttcatctgtatgaatgcatgcaaaaatcgagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0116400, RefSeq:Os01g0116400