Os01g0116900

From RiceWiki
Revision as of 04:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0116900| Description = Similar to LRK14| Version = NM_001048381.1 GI:115434175 GeneID:4326096| Length = 2565 bp| Definition = Oryza sativa...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0116900

Description

Similar to LRK14

Version

NM_001048381.1 GI:115434175 GeneID:4326096

Length

2565 bp

Definition

Oryza sativa Japonica Group Os01g0116900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:953075..955639

Sequence Coding Region

953075..953189,954211..954234,954567..955639

Expression

GEO Profiles:Os01g0116900

Genome Context

<gbrowseImage1> name=NC_008394:953075..955639 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:953075..955639 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacacaagcatgatacactggcatggctgcacctgcaaaaaattactgaagaaacaaaacttacctgctatcacagatgcaatattccaattgtctgtagcagcagttcaaggttcacatgtcaaagtaattgcagctacatcatcggttaccgcatttgttgttcttttatcaatggtagccattgcactttatctttcactgaagacaagatataacgaagagatacacatgaaggtagaaatgtttctcaaaacgtatggcacatcaaaacccacaaggtacactttctccgaagtgaagaagatagcaagacggttcaaggttaaagtaggacaaggaggatttggaagtgtgtacagaggcgagctaccaaatggagtccctgtggcggtcaagatgctagaaaatccaaaaggagaaggagacgaattcatcaatgaggtcgcgactatcgggagaatccatcatgcaaacattgtccgcctccttggcttttgctcagaaggaacaaggcgggctctcatttacgaatacatacccaatgattcgctggagaaatatatattttcacatgattctaatacttctcaagaactcctagtaccaagcaagatgctagatattgctttaggcattgcccgaggaatggagtacctgcatcaaggatgtaaccagcgtatcctccactttgatatcaaacctaacaacatcttgctggactataacttcagcccgaagatttcagactttggccttgcaaagctgtgtgcaagggaccaaagcatcgttaccttgactgcagcaagaggcacgatgggctatattgcaccagagctatattctcggaactttggggagatatcttacaagtcagatgtttacagtttcggcatgctggtactagaaatggtcagtggaaggaggaattcagacccaagtgttgaaagccaaaatgaggtttacttcccagagtgtatctatgaacaggttaccactgggcgggatttggaacttggtagggaaatgactcaagaagagaaagaaacaatgagacagctggccattgtggcactatggtgcattcaatggaacccaaagaaccggccatcaatgacaaaggtggtgaacatgctaacagggaggttgcagaatctacatgtgccacctaaaccatttttctcagctgatagccatcctataatgtaa</cdnaseq>

Protein Sequence

<aaseq>MNTSMIHWHGCTCKKLLKKQNLPAITDAIFQLSVAAVQGSHVKV IAATSSVTAFVVLLSMVAIALYLSLKTRYNEEIHMKVEMFLKTYGTSKPTRYTFSEVK KIARRFKVKVGQGGFGSVYRGELPNGVPVAVKMLENPKGEGDEFINEVATIGRIHHAN IVRLLGFCSEGTRRALIYEYIPNDSLEKYIFSHDSNTSQELLVPSKMLDIALGIARGM EYLHQGCNQRILHFDIKPNNILLDYNFSPKISDFGLAKLCARDQSIVTLTAARGTMGY IAPELYSRNFGEISYKSDVYSFGMLVLEMVSGRRNSDPSVESQNEVYFPECIYEQVTT GRDLELGREMTQEEKETMRQLAIVALWCIQWNPKNRPSMTKVVNMLTGRLQNLHVPPK PFFSADSHPIM</aaseq>

Gene Sequence

<dnaseqindica>1..115#1137..1160#1493..2565#atgaacacaagcatgatacactggcatggctgcacctgcaaaaaattactgaagaaacaaaacttacctgctatcacagatgcaatattccaattgtctgtagcagcagttcaaggttcgtacacagatactccctccatggctccatccataaatgtttgaggcgctttgacttttttaaacatatttgaccgttcgtcttattcaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatatacttttatgtatacatatagttttacatatttcacaaaagtttttaaataagacgaacggtcaaacatgtttaaaatagtcaacagcgtcaaacatttagggaagaagggagtagtttagatagaagtaggtaatttggttgcttgtatggtacaattagagttgcaacgagatgctgcttgattgtttacttattttgatgggtgacaaggttaaatagatctgaggtgtgatagacagatgctttgcaacccctcatctgccttatcccaccctaataactcagtacttagcagttagcaccagcaagatgcttattgtatttgctgaacatgacgtagggagcatttctcatttacagatatattcatatagttaatacacataactggtcctcagaatctaaaacttaataagagcaaggtcaatagtatagctaactactggctccaaaacatctatagccaatctaatagcccattcatacaatagttaactataaaaatatactgtaccattaatacacggtcccacctctcatacacacataacatcttggagtccgtgttgcagccggctacaaatctgtagcccgctttcttctctctcttctcttttcttctcgatatatggttacagccggcttatagcctgctattgtacctgctcttaagcgcatcccgcctgggggtctggttccactaattgcactatagcaatcacttgtaaataaccataaatgttggggtttaccttttctttctaaaaaaaactacttttcctgcggtgtgcacacggaaagcttgtgtgcacaggatacgttcacttaatcaaaatatcaatcaaatctaaattctcttgtttggtatttgcaggttcacatgtcaaagtaattgcaggtactgctcaatccaaatcttcctttgttcaaatcaaagtaaaaagaaagaagaaaatctatctgttacatacagagtcttatttttatctactactgtcatacattctcttttacacattacaatcaccaagtctggtgtctttatattttctatcctaatcaacgtgtcgatagtatgctcctccttcgatttatgtggtagcatggttttcccagcatgttcctctattccattttcctgagttataagaccttagtatcaataaaagttaggctatgagactttgggcagaaagaatgcaatgcactaatttctctctgcataatcagctacatcatcggttaccgcatttgttgttcttttatcaatggtagccattgcactttatctttcactgaagacaagatataacgaagagatacacatgaaggtagaaatgtttctcaaaacgtatggcacatcaaaacccacaaggtacactttctccgaagtgaagaagatagcaagacggttcaaggttaaagtaggacaaggaggatttggaagtgtgtacagaggcgagctaccaaatggagtccctgtggcggtcaagatgctagaaaatccaaaaggagaaggagacgaattcatcaatgaggtcgcgactatcgggagaatccatcatgcaaacattgtccgcctccttggcttttgctcagaaggaacaaggcgggctctcatttacgaatacatacccaatgattcgctggagaaatatatattttcacatgattctaatacttctcaagaactcctagtaccaagcaagatgctagatattgctttaggcattgcccgaggaatggagtacctgcatcaaggatgtaaccagcgtatcctccactttgatatcaaacctaacaacatcttgctggactataacttcagcccgaagatttcagactttggccttgcaaagctgtgtgcaagggaccaaagcatcgttaccttgactgcagcaagaggcacgatgggctatattgcaccagagctatattctcggaactttggggagatatcttacaagtcagatgtttacagtttcggcatgctggtactagaaatggtcagtggaaggaggaattcagacccaagtgttgaaagccaaaatgaggtttacttcccagagtgtatctatgaacaggttaccactgggcgggatttggaacttggtagggaaatgactcaagaagagaaagaaacaatgagacagctggccattgtggcactatggtgcattcaatggaacccaaagaaccggccatcaatgacaaaggtggtgaacatgctaacagggaggttgcagaatctacatgtgccacctaaaccatttttctcagctgatagccatcctataatgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0116900, RefSeq:Os01g0116900