Os01g0117100

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Revision as of 04:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0117100| Description = Similar to LRK14| Version = NM_001048383.1 GI:115434179 GeneID:4326098| Length = 3471 bp| Definition = Oryza sativa...")
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Gene Name

Os01g0117100

Description

Similar to LRK14

Version

NM_001048383.1 GI:115434179 GeneID:4326098

Length

3471 bp

Definition

Oryza sativa Japonica Group Os01g0117100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:960681..964151

Sequence Coding Region

960681..961575,962720..962743,963079..964151

Expression

GEO Profiles:Os01g0117100

Genome Context

<gbrowseImage1> name=NC_008394:960681..964151 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:960681..964151 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagaggatttcttgcagcaaccctcctggtgttgagccttcttctcaacctgcacacagcagcgtcagtgtcagcgtgggaagacaaggatttcttcagctactgcccgccgtcgaggtgcggcgagcatggccccgagatcaggttccctttcaaacttgaatccaaaaatacaccatcgtcatgtggcgtgccatgcatgaagctatcatgctctggccaatataccatcctacataacaaataccttggaaggccatacaagttgaccgccatagattacaagcatgctctcctgaccgccgtcccgctcgcagacgaagacaactactcctcaccgtctccctgcccacttctaaaatccatatctatcaggccaaacttaataacagggccaggctatggttattacaacacagggtaccagaacccttgccaaacatacgatacctactatgcagcactagtaagctgttcaacagaatttgccctagctagtgtccctggcactgccaccgataacgattatattgctggccccatctcttgccttagcaaccaaacccacttctcctatttggtggcttatcgtgtaactatgtctcttcttccgttggactgcgaggtcatctcagatggccccattccgataccagctttttattactccggttatatcccatccatgttcacaacaagtgcagacagaatcctcgactatccttccggttatgtcttatccacgttcagagaaagtgcagaaagaatcctcaattcttctgagaccatgatctggtggtatttctacaagtacgatggcagacattgtgaacaacaaggccgacgctgcgcattcagctcacaaaggaatcaaacattctgcatgggtagaggttcacatgtcaaagtaatagcagctacatcttcggttgctgcatttgttattcttctgttgatggtggccactgcactatatctttcactgaggacaagatataatgaagagatacatctgaaggtagaaatgtttctcaaaacatatggcacatcgaaacccacgaggtacactttctccgaagtaaagaagatagcaagccggttcaaggttaaagtaggacaaggtggatttggaagtgtgtacagaggtgagctaccaaacggagtccctgtggtggttaagatgctagaaaactccaaaggggagggagatgaattcatcaatgaggttgcaactatcgggagaatccaccatgcaaacattgtccgcctccttggcttttgcttagaaggaacaaggcgggctctcatttacgaatacatgcctaacgattcgctggagaaatatatattttcacatgattctgatacttctcaagaagtcctagtgccaaacaagatgctagatattgctttaggcattgcccgaggaatggagtacttgcatcaaggatgcaaccagcgtatcctccactttgatatcaagcctcataacatcttgctggactataacttcagtccgaagatttcagactttggccttgcaaagctgtgtgcaagggaccaaagcatcgttaccttgactgcagcaagaggcacgatgggctatattgcaccagagctatattctcggaactttggagagatatcttacaagtcagatgtttatagtttcggcatgctggtgttagaaatggttagcggaaggaggaactcagacccaagtgttgaaagccaaaacatggtctacttcccagaatggatctatgaacaggttaccgctgggcaggatttggcacttggtagggaaatgactgaagaagagaaagcaacaacgagacagctggccattgtggcactatggtgcattcagtggaacccaaataaccggccatcaatgacaaaggtggtgaacatgctaacagggaggttgcagaatctacaggtgccgcctaagcagtttttctcagctgacagccatcctactctgtaa</cdnaseq>

Protein Sequence

<aaseq>MRGFLAATLLVLSLLLNLHTAASVSAWEDKDFFSYCPPSRCGEH GPEIRFPFKLESKNTPSSCGVPCMKLSCSGQYTILHNKYLGRPYKLTAIDYKHALLTA VPLADEDNYSSPSPCPLLKSISIRPNLITGPGYGYYNTGYQNPCQTYDTYYAALVSCS TEFALASVPGTATDNDYIAGPISCLSNQTHFSYLVAYRVTMSLLPLDCEVISDGPIPI PAFYYSGYIPSMFTTSADRILDYPSGYVLSTFRESAERILNSSETMIWWYFYKYDGRH CEQQGRRCAFSSQRNQTFCMGRGSHVKVIAATSSVAAFVILLLMVATALYLSLRTRYN EEIHLKVEMFLKTYGTSKPTRYTFSEVKKIASRFKVKVGQGGFGSVYRGELPNGVPVV VKMLENSKGEGDEFINEVATIGRIHHANIVRLLGFCLEGTRRALIYEYMPNDSLEKYI FSHDSDTSQEVLVPNKMLDIALGIARGMEYLHQGCNQRILHFDIKPHNILLDYNFSPK ISDFGLAKLCARDQSIVTLTAARGTMGYIAPELYSRNFGEISYKSDVYSFGMLVLEMV SGRRNSDPSVESQNMVYFPEWIYEQVTAGQDLALGREMTEEEKATTRQLAIVALWCIQ WNPNNRPSMTKVVNMLTGRLQNLQVPPKQFFSADSHPTL</aaseq>

Gene Sequence

<dnaseqindica>1..895#2040..2063#2399..3471#atgagaggatttcttgcagcaaccctcctggtgttgagccttcttctcaacctgcacacagcagcgtcagtgtcagcgtgggaagacaaggatttcttcagctactgcccgccgtcgaggtgcggcgagcatggccccgagatcaggttccctttcaaacttgaatccaaaaatacaccatcgtcatgtggcgtgccatgcatgaagctatcatgctctggccaatataccatcctacataacaaataccttggaaggccatacaagttgaccgccatagattacaagcatgctctcctgaccgccgtcccgctcgcagacgaagacaactactcctcaccgtctccctgcccacttctaaaatccatatctatcaggccaaacttaataacagggccaggctatggttattacaacacagggtaccagaacccttgccaaacatacgatacctactatgcagcactagtaagctgttcaacagaatttgccctagctagtgtccctggcactgccaccgataacgattatattgctggccccatctcttgccttagcaaccaaacccacttctcctatttggtggcttatcgtgtaactatgtctcttcttccgttggactgcgaggtcatctcagatggccccattccgataccagctttttattactccggttatatcccatccatgttcacaacaagtgcagacagaatcctcgactatccttccggttatgtcttatccacgttcagagaaagtgcagaaagaatcctcaattcttctgagaccatgatctggtggtatttctacaagtacgatggcagacattgtgaacaacaaggccgacgctgcgcattcagctcacaaaggaatcaaacattctgcatgggtagaggtattatttcttactggccaaacaactactcctatacaactcgcagtaccattcttgtttatcatctgtaagttttacaatttccaatttacagccccacacatatccatgctagtgctatttgatcgtcaaaatccagcaaaacactggcaattatgcccgatggataagaaaacaatatttatcagcacatgagcatcacttatattatctttatttaagacccacttatattatctgatcatcttaaaaactgaaagcaggaaatgaccataaccttgatatgccagcacattcatgcatggttgcacttgaataaagttaccaaagaagcagaacttatttggtcacaactgtagcattccgattgcctgtagcagaagttcaagggatacaggtagctcagatgggatgagacttgagggtatacaagtaatacctccgttttcaatatatgacatggatgactcttgaacatacttttaatatacttaaaaatggagggagtaggtattttggtctattgtgtgatacaacgagagctgcagtaagatgatgcttggttgctttgatggctgttgaggttaacatagatctgagatgtggtgtgtagataattttgtaaccctttttccacgttatcccaccctaaccattcttaatctgccattccgtcttgcttagccaccatcattagcacatggcaacttgcttattagtatgagttatgatatctgctgaacaaaacgtagggatcatttctcacttacaaatatattcatatataggccttgtttagttctaaatttttttcttcaaacttccaacttttccatcacatcaaaactttcctacacacataaacttccaacttttttcttcaaacttccaattttagtcaaatttccaattttggtgtggaactaaacacagccataattgaataattcaaacacatctgattccacagaatctaaaacttacacgcactccactgggtgtctggtcttccatactgcactatagcagtcagctgtatacccatgtcagattttaccttttctttctcaagtcaatttctcctctctttttttcctaacgaaactatcgatcaagtctgaattctcttgtttggtttttgcaggttcacatgtcaaagtaatagcaggtattggttcaataatccaaaccttcttttgttcaatgaaagtaaaataaaaggaacaaattaaagttatctatcacatactaagtcttattattagctcctctggtcttataatctcttatcattattacaatcctaatggtggctctctaatttatattcgtaatcaatgtgttgatagtctatttgctcttctgtttgtacggaaagatggttttgccagcatattcctctacattgcttttctgagctaagtcttataaatataagttgggctgtgagccttctgtctagaaacaacacaatgcactaacttttattatctgcatcatcagctacatcttcggttgctgcatttgttattcttctgttgatggtggccactgcactatatctttcactgaggacaagatataatgaagagatacatctgaaggtagaaatgtttctcaaaacatatggcacatcgaaacccacgaggtacactttctccgaagtaaagaagatagcaagccggttcaaggttaaagtaggacaaggtggatttggaagtgtgtacagaggtgagctaccaaacggagtccctgtggtggttaagatgctagaaaactccaaaggggagggagatgaattcatcaatgaggttgcaactatcgggagaatccaccatgcaaacattgtccgcctccttggcttttgcttagaaggaacaaggcgggctctcatttacgaatacatgcctaacgattcgctggagaaatatatattttcacatgattctgatacttctcaagaagtcctagtgccaaacaagatgctagatattgctttaggcattgcccgaggaatggagtacttgcatcaaggatgcaaccagcgtatcctccactttgatatcaagcctcataacatcttgctggactataacttcagtccgaagatttcagactttggccttgcaaagctgtgtgcaagggaccaaagcatcgttaccttgactgcagcaagaggcacgatgggctatattgcaccagagctatattctcggaactttggagagatatcttacaagtcagatgtttatagtttcggcatgctggtgttagaaatggttagcggaaggaggaactcagacccaagtgttgaaagccaaaacatggtctacttcccagaatggatctatgaacaggttaccgctgggcaggatttggcacttggtagggaaatgactgaagaagagaaagcaacaacgagacagctggccattgtggcactatggtgcattcagtggaacccaaataaccggccatcaatgacaaaggtggtgaacatgctaacagggaggttgcagaatctacaggtgccgcctaagcagtttttctcagctgacagccatcctactctgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0117100, RefSeq:Os01g0117100