Os01g0118000

From RiceWiki
Revision as of 04:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0118000| Description = Similar to Fructose-bisphosphate aldolase (EC 4.1.2.13) (Fragment)| Version = NM_001048392.1 GI:115434197 GeneID:4326...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0118000

Description

Similar to Fructose-bisphosphate aldolase (EC 4.1.2.13) (Fragment)

Version

NM_001048392.1 GI:115434197 GeneID:4326074

Length

3426 bp

Definition

Oryza sativa Japonica Group Os01g0118000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1015067..1018492

Sequence Coding Region

1015130..1015276,1016440..1016709,1016807..1016916,1017001..1017091,1017591..1017860
,1017968..1018246

Expression

GEO Profiles:Os01g0118000

Genome Context

<gbrowseImage1> name=NC_008394:1015067..1018492 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1015067..1018492 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatgctgacggccaagctcacctccccccccgccgccaccacctggctccccggcggcggccgccgatccgcgccgccccgccgtgctacggtgatccgcgccgccgccgtctcctacgccgacgagctcgtctccaccgcgaaatctgttgcttccccagggcgtggtatcctggcaattgatgagtcgaatgccacatgcggaaagagattagcatccattggtttggacaacacagaagttaaccgccaggcttacaggcagcttttactgaccactgctggtcttggtgaatatatttctggtgctatcctttttgaggaaactctttatcagtcaaccactgatggtaagaagtttgttgactgcttgaaggatcagaatatcatgcccggtatcaaggtcgacaagggcttggttccattgcctgggtccaacaatgaatcttggtgccaaggcctagatggtttggcttcaaggtgtgctgagtactacaagcagggggcacgcttcgctaagtggcggactgttgttagcatcccttgtggtccctcagcattagcagtcaaggaagcggcatggggacttgctcgatatgctgccattgctcaggacaatggcttagtgccaattgttgagccagagatccttcttgatggtgaccatgcgatcgagagaactcttgaagtggcagagaaagtgtggtctgaggtattcttctacctggcccaaaacaatgttctttttgagggtatcctgctgaaacccagcatggtgacccctggagctgaacacaagcagaaggccactccagaagccattgcgaagcacacccttacaatgctgaggaggagagtgccgcctgctgtccctggaatcatgttcctttctggtgggcaatctgaggtggaggcaaccctgaacctgaacgcgatgaaccaagaaccaaacccatggcatgtgtccttctcatacgcccgggctctccagaactcggtgctgaagacatggcaggggcgccccgagaacgtggaggcagcgcagaaggcactgctggtccgtgccaaggcgaactcgctggctcagctcggtcgctacaccggcgagggcgagagcgatgaggccaagaagggaatgttccagaagggctacacttactga</cdnaseq>

Protein Sequence

<aaseq>MAMLTAKLTSPPAATTWLPGGGRRSAPPRRATVIRAAAVSYADE LVSTAKSVASPGRGILAIDESNATCGKRLASIGLDNTEVNRQAYRQLLLTTAGLGEYI SGAILFEETLYQSTTDGKKFVDCLKDQNIMPGIKVDKGLVPLPGSNNESWCQGLDGLA SRCAEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEI LLDGDHAIERTLEVAEKVWSEVFFYLAQNNVLFEGILLKPSMVTPGAEHKQKATPEAI AKHTLTMLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQEPNPWHVSFSYARALQNS VLKTWQGRPENVEAAQKALLVRAKANSLAQLGRYTGEGESDEAKKGMFQKGYTY</aaseq>

Gene Sequence

<dnaseqindica>64..210#1374..1643#1741..1850#1935..2025#2525..2794#2902..3180#aaacacgccgcaaagcgaagaagcgatcgcacgttcgcacgcagacgcagccgcggcggatcaatggcgatgctgacggccaagctcacctccccccccgccgccaccacctggctccccggcggcggccgccgatccgcgccgccccgccgtgctacggtgatccgcgccgccgccgtctcctacgccgacgagctcgtctccaccgcggtgagcccccaccaaaccctaccacatctccctcgttttcatcgtacttgttgctctaggagccggtcgcctttgaaaggatctatgctttggaggttgctcgtgtcgcatgtgccgatctatgatggcgccgtccgtgtgtgtgttggtatctagcgatttgtggtggggacttttcagtagggttggggggggggggtgtgttggcgaaaataatcgagactagtatattggattatctgaatgaattcaagtatctgttaaatctacaagtacatacaaggtgatttggtgaaatagcaacaaagtgcagatattttggacagtttataatcctgacaatagttttacttgaataaaagcttctgcgctcgtttgagattttttttttgatgcagaattaaaattggaataatgaactaggagtatgtaaggtctgaagctgtgatttccagtataatccttgctacttgttccatcccaaatcaggtcgtgctaaatctggtcaatcgaatcgagtcaactctactgatactggtttcatgtagatacactggtggcatttgtctaaattgttggctgttatcatactatgtgctgattatgcgatttgttgagtggtaaatcttgttttcacaatgcttctgtcttgtttactgatcctggtaatcttgtggttctagtggataatgatgtgaatagtgggctgtattgatgctgaatagtgggctgtattgatgctgtctggttaacttttgattcagtcatggattcgttcggtataaaatgatcctggatgattgtttttgggtcggcattttagatgtatgttagctgactgcttgagtttttggataaaattaacctgctaggaagggctgaagtatagagcagaaaattagtgttgctctggacacaaattttcaaactgcaagggtcactgaaatagttcagcaagtcatggtctatacaatttctttgttatgtaatttggctaaatgtttgagcttatgtctctctgatttgagtgacttggggtttttttcaacctcgggtcctaagccattcctattttctcactacttgcttcttgacagcaatgattttttttcctgttgattcattgctgctaaactaatgtttctaactttccatctgtgcagaaatctgttgcttccccagggcgtggtatcctggcaattgatgagtcgaatgccacatgcggaaagagattagcatccattggtttggacaacacagaagttaaccgccaggcttacaggcagcttttactgaccactgctggtcttggtgaatatatttctggtgctatcctttttgaggaaactctttatcagtcaaccactgatggtaagaagtttgttgactgcttgaaggatcagaatatcatgcccggtatcaaggtcgacaaggtatgcatgccatgatatgatgatcgtcatattgttttcatcaagacagtttcagcattggttcttactacttcatggtttttgttgtctaaaatagggcttggttccattgcctgggtccaacaatgaatcttggtgccaaggcctagatggtttggcttcaaggtgtgctgagtactacaagcagggggcacgcttcgctaagtggttagttcatactcattgtgactctgtctaatttattggcatatatcttttctaaactttctgtggtatgttgttcttctccaggcggactgttgttagcatcccttgtggtccctcagcattagcagtcaaggaagcggcatggggacttgctcgatatgctgccattgctcaggtaaaaatgtcactatcaactacattgctttagtttgatagtgtgcttaagagccttgatgaacaaccttttttttatggtcttattttgatgtttcaaaacgcttttgacaatagtaataacctgtactatcataattgttgaacacttgtactgttcttgaaaccatatacatcaattatgcacagtgactgcacatggaaacacatataacaatggtaagaattaagttaaactcatgtagaaagctggaggaaagagcttgtgcctttgtccaatcaatgcagttctctacactatctttttttagtgttgacaccatctaaaatgtttcgaaatcgagtaatagtgatgcaatatacaccacatcatgtaatttcaacacaatttgtgtcaactaacatgcatatatgctctagtgctttctattcctcgcaagtcacaagaagttttctatttgttcaccatgttttaaacttttaactggaatgacctgcaggacaatggcttagtgccaattgttgagccagagatccttcttgatggtgaccatgcgatcgagagaactcttgaagtggcagagaaagtgtggtctgaggtattcttctacctggcccaaaacaatgttctttttgagggtatcctgctgaaacccagcatggtgacccctggagctgaacacaagcagaaggccactccagaagccattgcgaagcacacccttacaatgctgaggaggagagtgccgcctgctgtccctggaatcatggtattttcttagctcttgattctcatagtaattttatcttctataccatctccattcgaaaccaactggacagagttctgtaactttgttcgttttgttttctccagttcctttctggtgggcaatctgaggtggaggcaaccctgaacctgaacgcgatgaaccaagaaccaaacccatggcatgtgtccttctcatacgcccgggctctccagaactcggtgctgaagacatggcaggggcgccccgagaacgtggaggcagcgcagaaggcactgctggtccgtgccaaggcgaactcgctggctcagctcggtcgctacaccggcgagggcgagagcgatgaggccaagaagggaatgttccagaagggctacacttactgatgcggcagaagagacttccgtgatatacaacatgccatttcgtgtcactgttttttgaacaccggagtgaataatcaccagagtatgtttggtgccaccgattgttgttagcttcgttagcacgggagaaaccttagagagctgtatctgactctgaaacacactattttgatagcacgcttttactgtaagcatatgcctttcggccatgagactgtgagagagatgtttcatttgtgttggggt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0118000, RefSeq:Os01g0118000