Os01g0118400

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Revision as of 04:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0118400| Description = Protein of unknown function DUF563 family protein| Version = NM_001048395.2 GI:297595983 GeneID:4326077| Length = 26...")
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Gene Name

Os01g0118400

Description

Protein of unknown function DUF563 family protein

Version

NM_001048395.2 GI:297595983 GeneID:4326077

Length

2678 bp

Definition

Oryza sativa Japonica Group Os01g0118400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1056177..1058854

Sequence Coding Region

1056403..1057584

Expression

GEO Profiles:Os01g0118400

Genome Context

<gbrowseImage1> name=NC_008394:1056177..1058854 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1056177..1058854 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacgcagattccgtggaccggcggccgctctgcgacttctccgacttccgcaccgacatctgcgacttctccggcgacgtccgcatggcggccaacacgtcggagttcgtcgtcgtcgtcgacccggcggcggcggcggtgtcgcacaaggtgcggccgtacccgcggaagggcgacgcgacgtgcatggggcgcgtcacggagatcaccgtgcgcgccacgggcgacgcggcgggcgcgccgcggtgcacgcgggcgcacgacgtgcccgccgtggcgttctccatcggcgggtacacgggcaacatcttccacgacttctccgacgtgatcgtgccgctgtacaacaccgtgcagcgctaccgcggcggggtgcagctggtgatggtgaacgtggcgtcgtggtggctcgtcaagtacgacaagctcctccgcgagctgtcgcgccacgcgccgatcgacctcgccaaggccggcgccgccggcgaggtgcactgcttcccgagcgccgtcgtcagcctccgcgcgcaccgggagctcatcatcgagcgggagcgcagcctggacgggctggcgacgccggacttcacgcggttcctccgccgcgcgctgtcgctgccgcgcgacgcgccgacgcggctcggcgacggcaccgggcggcggccgcgcctcctggtcatctcccgggggcgcaccaggctgctcctgaacctcgacgccgtggtccgcgcggcggaggaggtcgggttcgaggtggtggtgaacgagtcggacgtggggaactccatcgagcaggtggggaagctgatcaactcgtgcgacgcgctgctcggcgtccatggcgccggcctgacgaacatgatgttcctgccgccgggagcgacgatggtgcaggtggtgccatggggcggcctccagtggatcgcgcgcatggactacggcgagccggcggcggcgatggggctcaactacatccagtacgagatcgccgtcgccgagagctcgctcaaggacaagtaccccgccggcgacgagatcttcaccaacccgacgggtctgcacaagagagggttcgccttcatgaagcagacgctcatggacggccaggacatcaccattgacgtcacccgattcaggccagtgttgcagcaagctctcgacaaccttgccaccaagtag</cdnaseq>

Protein Sequence

<aaseq>MNADSVDRRPLCDFSDFRTDICDFSGDVRMAANTSEFVVVVDPA AAAVSHKVRPYPRKGDATCMGRVTEITVRATGDAAGAPRCTRAHDVPAVAFSIGGYTG NIFHDFSDVIVPLYNTVQRYRGGVQLVMVNVASWWLVKYDKLLRELSRHAPIDLAKAG AAGEVHCFPSAVVSLRAHRELIIERERSLDGLATPDFTRFLRRALSLPRDAPTRLGDG TGRRPRLLVISRGRTRLLLNLDAVVRAAEEVGFEVVVNESDVGNSIEQVGKLINSCDA LLGVHGAGLTNMMFLPPGATMVQVVPWGGLQWIARMDYGEPAAAMGLNYIQYEIAVAE SSLKDKYPAGDEIFTNPTGLHKRGFAFMKQTLMDGQDITIDVTRFRPVLQQALDNLAT K</aaseq>

Gene Sequence

<dnaseqindica>1271..2452#ttgtgcacagaagcttccactttctagcttgctagcttagcctgacgacgagaggaggcatgcagagctaagccgccattagcaagagaggaagaagaagaagaagaagaaggtagctgaagccatgaagccgggggggagcagcgggcggctgcacgccctgcggttcgagtcgcagaggttcaggctgctgaccatcgtcgtcggctgcttcctcatctccctcaccttcctcctctcctcccgccccgacgccaccgtcttctccacccgtatgttcttcttcatctcttcttcttcttcttcttcttcttcctcctctcactttctttcttatcatcgatctcgatctccgttgcatcatgcatatgcactcggtgcaaattaagcagcaaaagtctgaactgcattgcatatgcagtgagccccagggagtcgttggaagacgcacgcatgccggcgatgaagatgctgcaccgatcatcgtccggcggcctcacccgggatttccatgtcgacatcctgccgcagcagggagagagacatgctcatatgcagcagagcgtcgatcaaaccgctgaaaagacagaatgtatatatgtaacccataatcattcattattctgtccatagatttagttcgtttttcttatgaacttatactgaattaattggtaggggtgaaagacacggtgataatccaggaggtcgccggcgagagatcggaagaggcggaggaggcggcggagcgtgtcgcggcagattccggcgacgaggctgcacctgcaggtatacgacgcaactgcaactttcgcaaaggactggtttttgactcgcctgtagctttcatggagaaaatctgacctctaaattgaacccacctgccagtcgccgacgaggacaacgccgtgaagaccacggccgccgtggaagaaaccactgctcgtcccgaccagccatgtacccatcacacacctgcacgcagtcaaattattgcagaattccaaattccgttgaaatttaattttctcaagagaaaaaatcgtgtttcttcttcttttacagtggaggagaagaatcagcagcagcttccggtgaagctgcaggacgccggcgagccagctcgcacgccggagcaaacggtgacgtcacgtacgtgattaatttcaaaccgaggaattaattaaaatcaacgccatgtctaatactgcaagtgcagtttaattttgaattttgggcaccaactaacgtggcggacaacgtgcgcgccatgaacgcagattccgtggaccggcggccgctctgcgacttctccgacttccgcaccgacatctgcgacttctccggcgacgtccgcatggcggccaacacgtcggagttcgtcgtcgtcgtcgacccggcggcggcggcggtgtcgcacaaggtgcggccgtacccgcggaagggcgacgcgacgtgcatggggcgcgtcacggagatcaccgtgcgcgccacgggcgacgcggcgggcgcgccgcggtgcacgcgggcgcacgacgtgcccgccgtggcgttctccatcggcgggtacacgggcaacatcttccacgacttctccgacgtgatcgtgccgctgtacaacaccgtgcagcgctaccgcggcggggtgcagctggtgatggtgaacgtggcgtcgtggtggctcgtcaagtacgacaagctcctccgcgagctgtcgcgccacgcgccgatcgacctcgccaaggccggcgccgccggcgaggtgcactgcttcccgagcgccgtcgtcagcctccgcgcgcaccgggagctcatcatcgagcgggagcgcagcctggacgggctggcgacgccggacttcacgcggttcctccgccgcgcgctgtcgctgccgcgcgacgcgccgacgcggctcggcgacggcaccgggcggcggccgcgcctcctggtcatctcccgggggcgcaccaggctgctcctgaacctcgacgccgtggtccgcgcggcggaggaggtcgggttcgaggtggtggtgaacgagtcggacgtggggaactccatcgagcaggtggggaagctgatcaactcgtgcgacgcgctgctcggcgtccatggcgccggcctgacgaacatgatgttcctgccgccgggagcgacgatggtgcaggtggtgccatggggcggcctccagtggatcgcgcgcatggactacggcgagccggcggcggcgatggggctcaactacatccagtacgagatcgccgtcgccgagagctcgctcaaggacaagtaccccgccggcgacgagatcttcaccaacccgacgggtctgcacaagagagggttcgccttcatgaagcagacgctcatggacggccaggacatcaccattgacgtcacccgattcaggccagtgttgcagcaagctctcgacaaccttgccaccaagtagattatgattacattttgttcctagttcatctcatcacattcacattcttttaccctcttcttttccatctctcgaagattatatatattgaatgcacacacttgcaactatatactattacactgtaattaagatagaattttaatgggcgaatacaaaaattgagagaggagattgtctgttcttgtgtactgctagtcctttgatataagtcaagttgtgaaag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0118400, RefSeq:Os01g0118400