Os10g0460500

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Revision as of 08:40, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0460500| Description = Conserved hypothetical protein| Version = NM_001071309.1 GI:115482361 GeneID:4348813| Length = 5045 bp| Definition ...")
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Gene Name

Os10g0460500

Description

Conserved hypothetical protein

Version

NM_001071309.1 GI:115482361 GeneID:4348813

Length

5045 bp

Definition

Oryza sativa Japonica Group Os10g0460500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17395583..17400627

Sequence Coding Region

17398270..17398479,17398571..17398950,17399033..17399305,17399437..17399497

Expression

GEO Profiles:Os10g0460500

Genome Context

<gbrowseImage1> name=NC_008403:17395583..17400627 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:17395583..17400627 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctagtagaggaagtggaagtggaagcggaaaaggaaaaggaaaaaaagcaagtggaggtacaagaggaaaaggaagaatgccactagatggagaaatcactgaaagaattagcacgctgcgcatggcaaatactccacgcactgaacgtcttagaagaaatttggcatcactagtgttacgccaggcgcttcagggtgtatattcggaaattctcggcgggtatatccaatcatatgagttggactatcaggatcaggatggatgctcgtttgttcaaggtagaatttttatggagtcaccacgaagtggagaagaagggttcattcaacatgatgcaacatttgttgtcatggatgaagattatgaaactggaaggattatggcccaaaagatctatgataccactatcaagtttcatggatacaacgatgtcattgcagatatctatctagttgcctactgtgaaacacttggtaaatgggttattggatatgagcctttttgccagtactggcttgaaagtacccttgcaccattttatgagagtgatactacaatttcagcatactggagagataaaatcagggaaatgactgaaagcatatcatatttatgcacaagaaaagtgagtcatggtggattagcaaatcgagagagttatgtgcttgacttggactcaaaattaaaattgattaatgtggcaaggtattcaactgatggtagcacaactcgtgacgatgtcgtggacttctttgaccttttatgcacggaagacaggattaatgcttcagggaatggaaatgtggagtgggaaggatttgactacttgatcaagtctaattcgatgtataacaccaggttcggcgagtggaaacaagcaaatattgaaccacccaattttgaaagaccattcagctga</cdnaseq>

Protein Sequence

<aaseq>MASRGSGSGSGKGKGKKASGGTRGKGRMPLDGEITERISTLRMA NTPRTERLRRNLASLVLRQALQGVYSEILGGYIQSYELDYQDQDGCSFVQGRIFMESP RSGEEGFIQHDATFVVMDEDYETGRIMAQKIYDTTIKFHGYNDVIADIYLVAYCETLG KWVIGYEPFCQYWLESTLAPFYESDTTISAYWRDKIREMTESISYLCTRKVSHGGLAN RESYVLDLDSKLKLINVARYSTDGSTTRDDVVDFFDLLCTEDRINASGNGNVEWEGFD YLIKSNSMYNTRFGEWKQANIEPPNFERPFS</aaseq>

Gene Sequence

<dnaseqindica>2688..2897#2989..3368#3451..3723#3855..3915#agacggcctcacgccctcaccccatttgttcagcagcacatcgatcgctcattcgctcccttccaggggagcacgcgtcgatcggttgaaggtattctcttttctggatggattctctactgactactgcatccctcctcttcttctccttcttcttcttcttcttcttcttttttttttcatggagctcgatccatacatgtattttgcacattcttctctctctcctttttctcgaactatccctgattcctgttgatttctagttcttttatccctatttcctaacccaaaccatgcatcaaataaggaaattttattttaaagtgaagcaaaatgatgatagtaagaactatagagtttataatggaaataaattttattttaattttgaagtatttaaagtgtacggtggtttttttaattcccgttgtaatttacagccatttagctactacccttgcatttgcagccatttagctactacccttgcatttgcatgtttgtactagtaatagttatccccactactatatccttatatcatgcaagtactgcagctgggtgtatgtatctattaatcacattgataataatatgaaatatatatggtcgatcatacgctattttttttctgataaatatggcaaataaacgttccgctatctctagcttcgacgcatcacgccactatgccgtgaatataagagcttatatctattttcttgcggggaaagtgcttatatatctattgtctgcattatacacgcacaacatattaacctccctaattagcaccggttttgagttaatcctttctttctgtatactaagtacttacaacctactaaacatttactcctataaatgtgtgtccacgcgtgaggccacgttatcgaggaactcatccaatatcatccaataatctgtaccgttcctgtttattctcgcctatcatgctgtagttatttattccttaatttattgattttgctttatacattttcccacacaacgctggagttgtcgtctatttatatcaacaattttcaccgatgtcaaaaggaaaaacatcacctcgcactaaaaactagtttttagtagcttttttttagaacgccattaacctcaagctgagctgcgtttcactactatacttatttgacatgcgactaatttagtttatttactagtactaccatataacagaggtatactcccagccctccacttttaaatcctcgaagttctacaaatagcatagttaatacattcaatgtgcatgttaaatcagtgtagtatttcccacagtatatatatgcaaatcttatgaaacactattttttggggggaatgttttataatatactaacaactatgatatgcacatttttttactatagattaataacggcaccctagcaattaatagaatgagtaatgcagtcaaacattagtgcaaatagttagtgaacataaaagtactgtccaaaaatgtgttgtgtgtctgtgttaaaatgtcaccagtcgtaaaaagtacagtacagtactatgcttttacaacttttagcaaatacatgatgatgaaattgaatagtcacatttaagtatagaataatcaaccaaaactcgtttttgacctggagggagcatgtgtgtatatatgtcaatatatactacggagtagataggttgaccacgttcatgaatgcatactagagtagtactacataacaattcatgtaaaattgttttagagaacaaacacctagatataaataaaaataagaaataatgaggtaattaactttagtatttagtagtagagtaacttttaagatgcatgaataactaactaggcaattaagcggttggggtaagcatgtaatacaacatggcttaaccgttgcttcaaagtatatatcaagttctttgtttaggaatctcaattagtagtcacacatgatcttttgcatgcatatattgcacagttttcttctaatatattaacatttaatctttttgcacattcacaataaaaaatgcacagtatatattcttgttgaaacactagacagatattgcacagctgttaattatgcgctgatcatcatcacttaattttgtgctgtctcttttttacatgcatggagatcgatcaaatatatagtatttgccaatgttgattttctaactatattttgcaatcgctagtcttttacttgtttgaaaagttgtgtacactctaattctagaacttcttttgtgtttaggagataaaatggagaacaaacatgtgttatatatatatatatatttatttatttatttatttatttatttttgttactaggttcttaaatgaaaatatcgtttcttcgttttgcgatctaagatgcatattacatatataaaagatactggcatactggcatttctatagcttagaaaaaacaaattagattcgttctcaacacgaaactaaattacacagccagtgtgcatatataggttgtgcatgttagtttactgatgctgaatcacgcagtggcgcagtattaagttttgggtgttcatggcacttataacacaaatctacataatgttttatattgatcataaaaatgttataagtgccatgtttggattattcttgtgatacggtaacatcatcacatgcaggcgccatggctagtagaggaagtggaagtggaagcggaaaaggaaaaggaaaaaaagcaagtggaggtacaagaggaaaaggaagaatgccactagatggagaaatcactgaaagaattagcacgctgcgcatggcaaatactccacgcactgaacgtcttagaagaaatttggcatcactagtgttacgccaggcgcttcagggtgtatattcggtacagaaattgtcactcttaccagtaactgttttctcatcaagtgatattcacatgcatgtaccaagtttattaatgtttttggttctaggaaattctcggcgggtatatccaatcatatgagttggactatcaggatcaggatggatgctcgtttgttcaaggtagaatttttatggagtcaccacgaagtggagaagaagggttcattcaacatgatgcaacatttgttgtcatggatgaagattatgaaactggaaggattatggcccaaaagatctatgataccactatcaagtttcatggatacaacgatgtcattgcagatatctatctagttgcctactgtgaaacacttggtaaatgggttattggatatgagcctttttgccagtactggcttgaaagtacccttgcaccattttatgagagtgatactacaatttcagcatactggagagataaaatcaggtgattatttatacatccaaaactctaatttgttcatcaatactgtcttttttttaacatacccacctgtttcattttgcagggaaatgactgaaagcatatcatatttatgcacaagaaaagtgagtcatggtggattagcaaatcgagagagttatgtgcttgacttggactcaaaattaaaattgattaatgtggcaaggtattcaactgatggtagcacaactcgtgacgatgtcgtggacttctttgaccttttatgcacggaagacaggattaatgcttcagggaatggaaatgtggagtgggaaggatttgactacttgatcaagtctaattcgatgtataacaccaggtatgcatgtgcgcgtgtatgcaactcgatctttctctccaccgtgcaatcaatcgatcgattacatttttaattagtgaattttccttctctctagcttgcataaatgtgctcattgatcatgcatgcaggttcggcgagtggaaacaagcaaatattgaaccacccaattttgaaagaccattcagctgagaaactggcatgttatttaagtattcataagaatgcccagggaatgaatcgagcatcgttgacaaatttttccaatgcactgctctgtaaaatacctgattacgctgggtataccagcttggaagagtatgtcatgaagtcctgtggctgtgacttgtgttatgacactgttgcctgtgtcacccctccccgcagagtttacattgacataatctatttcataaggcatctggttgaacatgctggtgacagaaaatacaataagactatggtatgtgattgttgcaccttttatatattatatataactcacaagaaataatgtcctgactcttattttcgttgccaatttctagttgcattggactgctgacgcaatatttgacaagatatgtgggatgtttcctggctttatgagcatggcctactcggttcaagcagtgaacccacggtattggtctaacaacccggagtggactaaactcttccgtgaggcggaggagaacggcattgaacttccagatgattcctactagtaagcaacgggtcttgattactccattaattttggattggattcaaaccgacctagctaaaataatacaattgcttgcagatcccaagccatatatatggaaaaaatattaacgacacacactttgtctactcttgttaggtgctcttgctgatccgaggacagatcgatggtagcagccaacttgaagtcggtacgtatgtaagttcgtcgtcctgtgatccttgacgaagcaagttgaaccaaccattaaataaattaagttaatacaccatctcatctgactgatggtgtagtagtctcagtgtgctagctagtgccaacgcatgcaaagctatacgctgtgtgtgttgtaaagcataagctagctagtcacgctctcagctgttatttgtcgttctagctatttgatgcggcatgcagtcacgaagactatgcagcttgatatgtatgtcgcagtattaattagtactatcttagttgaacctagcttgtcggttgatttgtactctatgtcgcagtacgtatcactacgtactctgcttctgtctcagttgaacttggaccttaattattaattagcttattgtgtgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0460500, RefSeq:Os10g0460500