Os01g0119000

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Revision as of 04:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0119000| Description = Protein of unknown function DUF563 family protein| Version = NM_001048398.1 GI:115434209 GeneID:4326082| Length = 30...")
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Gene Name

Os01g0119000

Description

Protein of unknown function DUF563 family protein

Version

NM_001048398.1 GI:115434209 GeneID:4326082

Length

3033 bp

Definition

Oryza sativa Japonica Group Os01g0119000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1077565..1080597

Sequence Coding Region

1077774..1078921,1079560..1079661,1080115..1080180,1080332..1080464

Expression

GEO Profiles:Os01g0119000

Genome Context

<gbrowseImage1> name=NC_008394:1077565..1080597 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1077565..1080597 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcagcgaggtgaagccggcgaagcttggcctccggcgacacctcaacgccggcttcttcgccggcttcctcctcgtcctcctcacctacgtcatcgtctcgcagcagttcgccatggaaactcccacagctgtcactagcagggcgccgaggattgacgagaatgagtcggtgaccaaggctcgcgttgaaacagagaagaagagggagcaggagtggcagcggccaaaggacacgtctggtgccgtctcagcagaagagttctccaaaagagactcgacaaatgccaaaccgattgagaacggcaaggtagtgtgcggctcgaacgggttctactccgacacctgcgacgtcgacggcgacgtccggatcaacggcacggctctctccgtgacccttgttccggcgagccgccggtcggagcgccgccgcgagtggaagatccagccgtacccgcgcaggaccgtgtccggcatcgcggaggtgaccgtgacgcggcagcaggaccgggccgccgcgccggcgtgcacggtgacccacggcgtgcccggcgtcgtgttcgcgctcggcggcctgaccggcaactactggcacgacttcagcgacgtgctggtgccgctgttcgtggcgtcgcggcggtacggcggcgaggtccagttcctggtcagcaacatccagccatggtggctgggcaagtacgaggccgtcgtgcggcggctgtcgcggtacgacgccgtcgacctcgaccgcgacacggaggtccggtgcttccgccgcgtcgccgtcgggctccgcatgcacaaggagttcagcgtgaagccggagctggcgccgggcgggcagcggctgacgatggcggacttcgccgcgttcctccgcgacacctacgcgctcccccgcgccgcggcggcgggcgcgaggcggccgcggctggtggtgatccggcgcgcgcactaccggaagatcgtgaacatggacgaggtggtgcgcgcggcggaggcggcggggttcgaggcggcggtgatgtcgccgcggttcgacgagccggtggaggaggtggcgaggaaggtgaacgcgttcgacgcgatggtgggcgtgcacggcgccgggctgacgaacgcggtgttcctgccggcgggggcggtggtgatccaggtggtgccgtacgggcggctggagcggatggcgagggcggacttcggcgagccggtggcggacatggggctccggtacatggagtacagcgtcgccgccgacgagagcacgctgctggagatgctggggccggagcaccaggtggtgaaggacccggaggcggttcaccggagcggctgggacaaggtcgccgagtactacctcggcaagcaggacgtccgcatcaacgtcgcccgcttcgccgccacgctcgccgccgccttcgatcaccttcgaccatcacatagctag</cdnaseq>

Protein Sequence

<aaseq>MGSEVKPAKLGLRRHLNAGFFAGFLLVLLTYVIVSQQFAMETPT AVTSRAPRIDENESVTKARVETEKKREQEWQRPKDTSGAVSAEEFSKRDSTNAKPIEN GKVVCGSNGFYSDTCDVDGDVRINGTALSVTLVPASRRSERRREWKIQPYPRRTVSGI AEVTVTRQQDRAAAPACTVTHGVPGVVFALGGLTGNYWHDFSDVLVPLFVASRRYGGE VQFLVSNIQPWWLGKYEAVVRRLSRYDAVDLDRDTEVRCFRRVAVGLRMHKEFSVKPE LAPGGQRLTMADFAAFLRDTYALPRAAAAGARRPRLVVIRRAHYRKIVNMDEVVRAAE AAGFEAAVMSPRFDEPVEEVARKVNAFDAMVGVHGAGLTNAVFLPAGAVVIQVVPYGR LERMARADFGEPVADMGLRYMEYSVAADESTLLEMLGPEHQVVKDPEAVHRSGWDKVA EYYLGKQDVRINVARFAATLAAAFDHLRPSHS</aaseq>

Gene Sequence

<dnaseqindica>1677..2824#937..1038#418..483#134..266#ggtgcaattctcgaacgacccaaaaccttgaacaattcaatccttcttcagagagattcagagttgggttcagaatatatatacactagcacgagtgaatagtagaggagacagagatagatagagaggagagatgggcagcgaggtgaagccggcgaagcttggcctccggcgacacctcaacgccggcttcttcgccggcttcctcctcgtcctcctcacctacgtcatcgtctcgcagcagttcgccatggaaactcccacaggtaacctaaccatcatcacgtactcttccattgcaagaagcttctttctttgcacaaagatcattctgttctgttgttgtcgtcgtcggtcatcatcattttgtccatgaactgatctgttcttgcttcttgctgaatgtttctcctgcagctgtcactagcagggcgccgaggattgacgagaatgagtcggtgaccaaggctcgcgttgaaacaggtgagaaagcacaggatttctgtcatcttgatcgtgtttttcttgactgcttcatcagtctaagaacacaaaagtcatcgtgagaagaagaaacggagatgatggatcatggatgagatcgaagtcaacatgttgggaggagcgaaccgtgtctccgatgggactaggagtatttaatttcgttcgatcggatcatggtacacttagggatggaagacgatcaattaaatctgggaaaagatcgagacgaaacctcaagaagcttctgatcaatacagtgatatactttgttaatactgatcatgatcagccaattttactaacagattgcatcgatcagtccaagcacaaacgtttacttacttctgtttgtttgcaaattttgcatgctagtattattttcacattggtgttccgattcatttctgacgtgaattctttcggcaaatgcagagaagaagagggagcaggagtggcagcggccaaaggacacgtctggtgccgtctcagcagaagagttctccaaaagagactcgacaaatgccaaaccgattggtaagcacaaaatatttgttcccaaaaacaaagtgattttatgttcttatttagagatcaaagtgacattttgttggtttctgattataattgctttcatttatttatttatgtgaatatagtacatccattcattttttttcaacgaactgcattcattcatttatgttgagagtatgactttattggattataagctttggaggacgtttgggaaagtactagtatttggaattttgcatgaacgtttgttgttttctttacaaaattacaaatttgtgcattaacatgatggatgttctcagaatactactcttgactgccgttgacatgtgggcccaactatattccaaatagcttctgtacttactagtactattcatgggttttactagcattgtaatgttactgtcaaattaaaggcaaagccatgcttttcactttccattagaaagatcatctaaaaacagaccaattggacccaaacatgaatactctacttaattagatcaatgagcaataaatgagttgaactaattactctctgtttgcaaattaatgatcgtttaactgattaattaataaatgagctaataaacctcgatgaatcaattttttttctgtttttggtgcaacagagaacggcaaggtagtgtgcggctcgaacgggttctactccgacacctgcgacgtcgacggcgacgtccggatcaacggcacggctctctccgtgacccttgttccggcgagccgccggtcggagcgccgccgcgagtggaagatccagccgtacccgcgcaggaccgtgtccggcatcgcggaggtgaccgtgacgcggcagcaggaccgggccgccgcgccggcgtgcacggtgacccacggcgtgcccggcgtcgtgttcgcgctcggcggcctgaccggcaactactggcacgacttcagcgacgtgctggtgccgctgttcgtggcgtcgcggcggtacggcggcgaggtccagttcctggtcagcaacatccagccatggtggctgggcaagtacgaggccgtcgtgcggcggctgtcgcggtacgacgccgtcgacctcgaccgcgacacggaggtccggtgcttccgccgcgtcgccgtcgggctccgcatgcacaaggagttcagcgtgaagccggagctggcgccgggcgggcagcggctgacgatggcggacttcgccgcgttcctccgcgacacctacgcgctcccccgcgccgcggcggcgggcgcgaggcggccgcggctggtggtgatccggcgcgcgcactaccggaagatcgtgaacatggacgaggtggtgcgcgcggcggaggcggcggggttcgaggcggcggtgatgtcgccgcggttcgacgagccggtggaggaggtggcgaggaaggtgaacgcgttcgacgcgatggtgggcgtgcacggcgccgggctgacgaacgcggtgttcctgccggcgggggcggtggtgatccaggtggtgccgtacgggcggctggagcggatggcgagggcggacttcggcgagccggtggcggacatggggctccggtacatggagtacagcgtcgccgccgacgagagcacgctgctggagatgctggggccggagcaccaggtggtgaaggacccggaggcggttcaccggagcggctgggacaaggtcgccgagtactacctcggcaagcaggacgtccgcatcaacgtcgcccgcttcgccgccacgctcgccgccgccttcgatcaccttcgaccatcacatagctagtgagtgagtgagtgagtgacacagatgttacagttgctgatagatatgatacaccacctcattggtcgcaatttggtacagaatgttcaacccatccttttttgtttttgttttggctcagtatatccatcatcattggtggagcgtatgaacatgcacattgattgtattgatttggtagagtacatgtatgtcaccgaattcatgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0119000, RefSeq:Os01g0119000