Os01g0120500

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Revision as of 04:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0120500| Description = Conserved hypothetical protein| Version = NM_001048403.1 GI:115434219 GeneID:4326035| Length = 4422 bp| Definition ...")
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Gene Name

Os01g0120500

Description

Conserved hypothetical protein

Version

NM_001048403.1 GI:115434219 GeneID:4326035

Length

4422 bp

Definition

Oryza sativa Japonica Group Os01g0120500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1159198..1163619

Sequence Coding Region

1159370..1159657,1162832..1162891,1163021..1163203,1163336..1163569

Expression

GEO Profiles:Os01g0120500

Genome Context

<gbrowseImage1> name=NC_008394:1159198..1163619 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1159198..1163619 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgttgtcgtctgcctccttgctccctcctccttccaccttcgtccccgtcctctcgccactccgcaagccgccgccccagcacctcgccatccgcggctccccccaccgccgtcgcggccgccgcctctcgctcgccgcttcctccgccgcctcaccggacttagagaaggagccctcgcaatcgccctcgccctcgccgcaggagaaatcccctggtgatctgtcggccgtggcggagagcgtgaaggtgctgaaggaggcggccaagacgaggaaggtgccgtcgccggagttgctcgcggcattggccaagatcaagaaggcaaagctcgacacatccaccttcttcgagaccctcggtgggacacagtccccgggcaggacatggatgctcatcttcactgctaagggtcggctggagaaaggacagtacttcccagtgaccgcagtccagcgctttgatgctgcaggaaagaggattgagaatggcgtgtatttggggcctgttgggtccttaacctttgaggggaggctgtcatggaagaagaagatactcgcattcatcttcgagcgggttcgcataaaggtcggccctttcggccccctcgaaatcagcctcggaggtggcaatgatggtagggagccgagcacaaaggaccctttctttgtgtggttctatgttgatgaggaaatcgctgtggcacaaggcagaggagggggagtggcttactggtgcagatgtaagcgtgttccatga</cdnaseq>

Protein Sequence

<aaseq>MAALSSASLLPPPSTFVPVLSPLRKPPPQHLAIRGSPHRRRGRR LSLAASSAASPDLEKEPSQSPSPSPQEKSPGDLSAVAESVKVLKEAAKTRKVPSPELL AALAKIKKAKLDTSTFFETLGGTQSPGRTWMLIFTAKGRLEKGQYFPVTAVQRFDAAG KRIENGVYLGPVGSLTFEGRLSWKKKILAFIFERVRIKVGPFGPLEISLGGGNDGREP STKDPFFVWFYVDEEIAVAQGRGGGVAYWCRCKRVP</aaseq>

Gene Sequence

<dnaseqindica>3963..4250#729..788#417..599#51..284#agcactgcagccacacacacctgcgactgcgagctccccgtctctcgccaatggcggcgttgtcgtctgcctccttgctccctcctccttccaccttcgtccccgtcctctcgccactccgcaagccgccgccccagcacctcgccatccgcggctccccccaccgccgtcgcggccgccgcctctcgctcgccgcttcctccgccgcctcaccggacttagagaaggagccctcgcaatcgccctcgccctcgccgcaggagaaatcccctggtgatctgtcggtgagtatccctttgcaaagatccccatctcttttttttttcctttttttttctttcccatcaatttctcttcctagtgattggtgaaagagtaaaaatggtttggttttttttgatgtggatttagcgtaggccgtggcggagagcgtgaaggtgctgaaggaggcggccaagacgaggaaggtgccgtcgccggagttgctcgcggcattggccaagatcaagaaggcaaagctcgacacatccaccttcttcgagaccctcggtgggacacagtccccgggcaggacatggatgctcatcttcactgctaaggtcaccaacatgcgcctcattgctcgcgagaggagcagccattttggtgtttctgaaagaaaatggaaaaaatcgtgcttggttgcttagttggtggtgaaactgaaagaactgaaaatgtctttgcagggtcggctggagaaaggacagtacttcccagtgaccgcagtccagcgctttgatgctgcagtaagctctcttcgttacttgccatgataatagaatctttatgctttagcagcccagttgccactttgttggggctgaaccaaatcacttcatgtgcaaactacaattcatcgaccggcaaacatatttcacacaatcaacccctcatcttgccataaactttgagtatagtttcaactagcaaatcagcaacgaaacaacaataaacacatgcatacaagacacggtgatttacgttgaaaaacctcctcggtgtgaggaggaaaaaaccacaggaccaacggttcactccaagcttccactataatcaacaattggtacaaatggagtcttctacatctagagacacatcacaacatcaactataacatcaagttacacacttggcatcatcaacatcaaccatcaaagttaacaagaggtatatcaacaaacaagcagagaaatagaagattctgtcttgttcggttctcagctgagatcttccaaaccacagatgcaaattgcacaaaacttgacagaaatgatggtctgagtcccttcaaagttatccaaaaaacagcccaatcggacaccatttgatccctcaaactgacattctaccaactgctagctccaaactacaactcctagctctaaactcccactccaatgggagctggctcctgtgggattggagaccagttgaaaagtgtttggctagtattcagctccagatctgaaattaaaaaaaaatggaaaaaaaacaatcccttatctctcgtgaatccctaggttgccgtcccgtgtgcgtcgccggtcgcgggccgcgcaccgtcccccacgcgccacccaccgccgccgcgtcgtccccgcacgcgccgtcagccgtgcgcctccaagccgtgagctgtcgaccccgccgcctgtgcgcctgtcgtgggagaggtgagggttacaggagggagagagagagaggggtgaggaggtgagtttggtgtggttcagtggtatttttgtgtaaatatgttaaaaaattagatggtagtgggtctattaggttggagtggagctgtggagcagcaaaaacccaactccaccctcgtagttcattttttaggagtagctctgctaactccactcccaaaaatggaggatctgaaccgtttggcacagttccggttccaggtaagttggagttggaagctagagctgtgccaaacggggccttcttctccactctcctctccctctcttgtgttttgctggttcattcactttctcaatggatgctgctctcacatctcaatgtaggctagggtttttcttcccatcataaaggatgagacaatctccatcattgatcaacacatgaatcatggctcacatttgttggacttttaggctacaatggactgagaacaaaggctccataaggagggaaatttggcccaacaaactccccctcccgacatcatgaagcacctcactaccttccgaaagtcattgagcctttgctctcagcccattgcagctcaaaagtccaacaaatacgagccattgattcatgtgttgatcaatggtagagattgcctcatcctttgtgatggaaagaaaaaccctagcctccattgagagaggtgagagcagaagccattgagagaggtgaaagaaccagcaaaagagggagatgagagtggagaaaaagagttgcagtttgttcaagttgggggggctcttacccaatcttcatcaagtcagcgattgaaggctcaaacgtggttggattggcaccaaacttggtgagtttgttcctcactttgagcacttcaatctgatcagtttgtgtgaggattggttgagtagagcaccggatttgagtggtggtttgtcagcttgagttactgcagttacaactctagtaccactttgttggggctgaaccaaatcacttcatgtgcaaactacaattcaccaactggcaaacatatttcacacaatcaatccctcatcttgccatgaatttcgaggatagtttcaactagcaaatcagtcgcggaacaacaataaacacatgcacacaagacatggtgatttacgtggaaaaacatactcggtgtgaggagtaaaaaccacgagaccaacagtccactccaagcttccaccataatcaacaatgggtacatatggagtcttctctagaacatctagaggcacatcacaacagcagctataacatcaagttacacatttggcatcatcaacatcaaccatcaaagctaacaagagatatatcaacaaataagcaaagaaatagcggattatgtccttttcggttctcagatgagatctcccaaaccacagatgcaaattgcactaaacttggcaaaaatgatggtctatgagtcccttccaagatatccaaaaaaaaaacagcccaatcggacaccgtttgatccctcaaactaacattctaccaactgttgtgcaagctgtaactgcagtaactcgagctgacaaaccaccactcaaatccggtgctctactcaaccaatcctcacacaaactaatcaaattaaagtgcttaaagtgaggaacaaactcaccaagtttggtgctaatccaaccacgtttgagcctccaatcgctgacttgatgaagatcgggtaagagccccaagctgaacaaactgccactcttattctccactctcctctccctctcttgtgttttgttggttctttcacttcctcaatggctgctgctctaacctctcttaatggaggctacggtttttcttcccatcacaaaggatgaggcaatctccaccattaatcaacacatgaatcaatggctcacatttgttggacttttgggctgcaatgggctgagagcaaaggctccatgtggagggaaatttggcccaacaccatgcacgaacctgacagcacagatgttgtagtttaatgtttttactgcttactgtttcctgaacactgcaagaaaccccctttgtaaaccatcttctgtgatactaccgtggtaactatttgatactgataaagacagggaaccgacaaacttaacctgaatttgctgcaaaaggcttcattgttcttgaaatttgcaaatgtttgctactgttatctgctatatactgtgtgttattcatccacatctcctgaacctgtacagggaaagaggattgagaatggcgtgtatttggggcctgttgggtccttaacctttgaggggaggctgtcatggaagaagaagatactcgcattcatcttcgagcgggttcgcataaaggtcggccctttcggccccctcgaaatcagcctcggaggtggcaatgatggtagggagccgagcacaaaggaccctttctttgtgtggttctatgttgatgaggaaatcgctgtggcacaaggcagaggagggggagtggcttactggtgcagatgtaagcgtgttccatgaactctgaagattcagttcagtcatcattccaggatgttcagttcagtttatgtatagataatttttcatcttctacatgtgtaaaaaaacgaagtattgaaaatgataccagttcgatgatgtctgcctgtacctgtaaattgtgttggtatagaatgccaaacgattgagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0120500, RefSeq:Os01g0120500