Os01g0121300

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Revision as of 04:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0121300| Description = Conserved hypothetical protein| Version = NM_001048410.1 GI:115434233 GeneID:4326042| Length = 4816 bp| Definition ...")
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Gene Name

Os01g0121300

Description

Conserved hypothetical protein

Version

NM_001048410.1 GI:115434233 GeneID:4326042

Length

4816 bp

Definition

Oryza sativa Japonica Group Os01g0121300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1197687..1202502

Sequence Coding Region

1197988..1198356,1198518..1198821,1199221..1199292,1199384..1199420,1199527..1199585
,1199844..1200128,1200293..1200465,1201020..1201213,1202245..1202374

Expression

GEO Profiles:Os01g0121300

Genome Context

<gbrowseImage1> name=NC_008394:1197687..1202502 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1197687..1202502 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaagaaggggcgcgggcgcgggcgctgcggtggtggtggtcgcggccttcgtggcggcggccgtggcgtcgggggacacgctcgccgatctcggcggcgccgccaaggggatcgacagcgtgccagaagtgaataacttgggaccatgggcgaaggggcttctgaaagggatgccggactcggcggcagggccagcagagggccccatcgcaaagtatccgctggttctggcagaggagaggacgcggcggccggatgttcttgaccaccttaggatgtatggaggagggtggaacatcactaacaagcactattgggcgtctgtttcattcacaggaattgctgggtttgttcttgctgctgggtggtttatttcgtttggaattgctgtagctgcaagctgcttttggaaatcaagaatagacaaagaaaatgattttcatgcagatatactgcgccttgtgttgcttgtggtcttcatatttactttaacggctggatctgttatcctcttttgtggacagagtaaattcggacaagaagctactagcactgtcgattttgttgtgaatcaatctgatttcaccattcagacgctaaggaatgttaccgattacttatcgcttgcaaagacaatcagtgtggcagcactctatcttccttcagatgtacaagggcaaattgacaatttgaaagtggacttaaataaagcggctgatactatatcccaaaagacatcagaaaactacagaaggataagaaaagttctccataacttgtcagttgctttgatttgcatagctgcgttgatgcctgttcttgcattcttgggatatgttttggagctgtatggacaaagaagtacagtttatgtatttgttaccttatgctggacagtagtggcaactctcttcattcttctagggattttcctgatattgaacagtgctgcaaaggatacctgtgaagcaatggatgaatgggcacaacatcctcaagcagagacagctctcagcaacatccttccatgtgtagatgaaagcacaaccaatcaaaccttgtaccagagtaaacatgttgtggtaattcttgtaggcatagttaatagggctatatctgctctttcaaatcgaaggccacatcataaacatcctgggcagttcatgccttacctgtgttctccctatgatgcgaacctgactgatcggcagtgcaagtctagggaggtcaccttcgataatgcaaccacagcatggctgaactatacatgcacagttcctgactcagatttgtgctctggccccagaaccataactccagagatatacagtcagcttgttttagctgccaatgtaagctatgctctgtaccattatgcccctctcatgctcaatctccaggactgcaagttcgtccgcaacacattcagctccatcgcttcgcagtactgccctcctatatggcgcgacctcagcttggtctcagcaggcctggctctcattgcctctggcttaacacttggcctcctcttgatgctttttgcggaccgcccccaaagggaggaggtgtccgagctgccatcagggtcaaggatcaccccagtagactgctctccatga</cdnaseq>

Protein Sequence

<aaseq>MGRRGAGAGAAVVVVAAFVAAAVASGDTLADLGGAAKGIDSVPE VNNLGPWAKGLLKGMPDSAAGPAEGPIAKYPLVLAEERTRRPDVLDHLRMYGGGWNIT NKHYWASVSFTGIAGFVLAAGWFISFGIAVAASCFWKSRIDKENDFHADILRLVLLVV FIFTLTAGSVILFCGQSKFGQEATSTVDFVVNQSDFTIQTLRNVTDYLSLAKTISVAA LYLPSDVQGQIDNLKVDLNKAADTISQKTSENYRRIRKVLHNLSVALICIAALMPVLA FLGYVLELYGQRSTVYVFVTLCWTVVATLFILLGIFLILNSAAKDTCEAMDEWAQHPQ AETALSNILPCVDESTTNQTLYQSKHVVVILVGIVNRAISALSNRRPHHKHPGQFMPY LCSPYDANLTDRQCKSREVTFDNATTAWLNYTCTVPDSDLCSGPRTITPEIYSQLVLA ANVSYALYHYAPLMLNLQDCKFVRNTFSSIASQYCPPIWRDLSLVSAGLALIASGLTL GLLLMLFADRPQREEVSELPSGSRITPVDCSP</aaseq>

Gene Sequence

<dnaseqindica>4147..4515#3682..3985#3211..3282#3083..3119#2918..2976#2375..2659#2038..2210#1290..1483#129..258#gaccgacgccgcgggcttagtccagtggaaggtgttcgtccactcgcgctcgcactcccgccgttacgcgcgcgcgcgccgccgccgccccgacctcgccgcgcgcgccgacgaacctagatgcggtgatgggaagaaggggcgcgggcgcgggcgctgcggtggtggtggtcgcggccttcgtggcggcggccgtggcgtcgggggacacgctcgccgatctcggcggcgccgccaaggggatcgacagcgtgccaggtgcgtgggcttgagctgttttgcggcgagtggtcctgcgattcgtctctcgttctattctatctctccgttgcgacttgcgatcgatcggtggagtggagtggagtgagcggagggggatcggatgagtagcttaattaggtcgagttcatccgtttcaatccattttgttactgattggagctgtgttttttgggtggatttcaccctgctgttcaggaccactgcgccggtgctacgtttgtcctgtctagtatcagtatgtgcgcttttttgttcagatattactaatttttttcgtcgccgtctgcgaaaccatcagcgtcttagggtgatctcatctcattcgatttctatatcggatatgctctattttgttcggagaatcaagcccaaataaatccggcttttgttttgctcaatttctgcataaaagagcggctattgttccggaggattcggcggtgattgctcgttcgttcgggccatattgcttcccctttactgcgtttgccgggtagatctccttccgtctgttagttgattttttaaaccccgtagttcagggatgctaattttggtgattcgcttccactagtaaaaattctctcatctcgtttggaacaagtcaaacactgggtaccagtatttaattatcatgtcggtgctctaatctgcgacggctacaattcggtctttacttacacgtgaagtcacaaggttcacacgaagcatttcttcctagggagtggtagaactttcatctttctgtgtaaaagcggcactttcgttcactggttcatgcgcaaacagaatctagattttcgtaatttatgcttataaatgtgaagctcgatgctttacttatcgtacaagattacaaccaagtggcaattttcatttgcttcttgccttgtacaagcaagcagaactttgatggtagttatggttaaatattatcagctagtagtattctggactggtactaaacggttgtttttcttccttttttgtgtgaactgctactacagaagtgaataacttgggaccatgggcgaaggggcttctgaaagggatgccggactcggcggcagggccagcagagggccccatcgcaaagtatccgctggttctggcagaggagaggacgcggcggccggatgttcttgaccaccttaggatgtatggaggagggtggaacatcactaacaagcactattgggcggtatgtgttgctatcaagaattcaagacactaaaagttttatactcttgaagctctagtttattagagatgtcatgatatgcaagtagacgatactagtatttatgttggttgttggaatatgatagtatagatcagtacaggctatatatgaactacaaattcagtctggacaatttatttctacttgtccaaatacagtagccagttacaggacaacttatagaccattcatggataaacttacttgattcttttttgtttggttttaaggtatttgtgaaatccccccaaaaaaaatctatgtaaaaacattgagaaatttgcggtagtatgatatgacagtgttgtctcactttctttgaactgtgtaaatactgtttacaaggtaatctaaggagaacaggaaaacactgactctacagtcgaaaaatgtatggcatagtttgaagttaaactggcctatgcctttaattatgattgaactgttatactcttcgttctgcttaatgcccatgttctgcctacatcttagctgaatcaagtttgtttcagtctgtttcattcacaggaattgctgggtttgttcttgctgctgggtggtttatttcgtttggaattgctgtagctgcaagctgcttttggaaatcaagaatagacaaagaaaatgattttcatgcagatatactgcgccttgtgttgcttgtggtcttcatatttactttaacgtaatgtgctaactctctaataatcattttttccttttctttttgagttcatctgattgggatatcgctggtttaaatagagttttctactccatgccactattgagttctaagatggcataactactggttctaatatctaccaatgttacattttgtaccagggctggatctgttatcctcttttgtggacagagtaaattcggacaagaagctactagcactgtcgattttgttgtgaatcaatctgatttcaccattcagacgctaaggaatgttaccgattacttatcgcttgcaaagacaatcagtgtggcagcactctatcttccttcagatgtacaagggcaaattgacaatttgaaagtggacttaaataaagcggctgatactatatcccaaaagacatcagaaaactacagaaggataagaaaagttctccataacttgtacgtttcaaactattcttgccatgtttacctctggtttcttgactttgaaagtcactgactgaataatagttcatgtgactatatagtatatttatctgtgggcctatatcttttcttcaaaatgacggcactgtgttgctaagaagcgtaatcaaaattcaaaatggttattatggcattgcattcatttatgctagcacattattagtaatgctatgccttcaactgaaaatttgaattcctgttttactacaggtcagttgctttgatttgcatagctgcgttgatgcctgttcttgcattcttgggatatggtaagaatttcattctgttagtcaaactgatgccctttttgttggttttgttatctcagatgtgttaacactcactacttgaacaacctattcctcacatttgcagttttggagctgtatggacaaagaagtacagtttatgtgtaagctttgtggccatgtacaaagtactgtgtattagagtgggcatgttagtgcagtaattttttaccacttactttttgaattttacagatttgttaccttatgctggacagtagtggcaactctcttcattcttctagggattttcctgatattgaacaggtattattaggttacgaatagccttctttccatgcgaaataattctaggaggtcttacaattctaattttctccttggtatggaaccatgaatcaaacagaacttcttttaccgtgaatcaggaggtaagcccacagtttcattaattaaaagtataagagctacaaacatatttagtagaaacatttttgtagaactcaacgatgatgaatttgcttgtcggttgatatgtgctatgtgttcatttgaaaagaatgaatttgcttgccatttgatatgtcacccatgttcatatgctatgaaccagcattgatagtatccctcccaaaactaaatatgtttttatgaggttgcaattcactgtttagtattaacaacattataatctttctgcaacagtgctgcaaaggatacctgtgaagcaatggatgaatgggcacaacatcctcaagcagagacagctctcagcaacatccttccatgtgtagatgaaagcacaaccaatcaaaccttgtaccagagtaaacatgttgtggtaattcttgtaggcatagttaatagggctatatctgctctttcaaatcgaaggccacatcataaacatcctgggcagttcatgccttacctgtgttctccctatgatgcgaacctgactgatcggcagtgcaagtctagggaggtcaccttcgataatgcaaccacagtaagttttggcattgttctgttactaatttcacaatttgttggcttcaattgaagtttttctctgatgcatgactcttgctgatctggtttattttaggattactagatggggtcatttgtgaagctttgcttgataacaaaatgatttcttcttttcaggcatggctgaactatacatgcacagttcctgactcagatttgtgctctggccccagaaccataactccagagatatacagtcagcttgttttagctgccaatgtaagctatgctctgtaccattatgcccctctcatgctcaatctccaggactgcaagttcgtccgcaacacattcagctccatcgcttcgcagtactgccctcctatatggcgcgacctcagcttggtctcagcaggcctggctctcattgcctctggcttaacacttggcctcctcttgatgctttttgcggaccgcccccaaagggaggaggtgtccgagctgccatcagggtcaaggatcaccccagtagactgctctccatgacgagctcagtctctatggtcattcagactagtatagcaattgcctgtaatagttaggaaaagaagaaggtgaagcactggggcaaagccccattttgcagtggagatgatctaggtggatgagtgcttccttccgtggtatacatggtatgtttcagggaatagttgtaaaggctaatgcctaatggcaaacaaaatttgggcaaaaccccactatgatatgaagagcaatgttctgtatcccctatgattgttcagctggacatgtttctttcttatgtacatgtcttgttctgtgtgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0121300, RefSeq:Os01g0121300