Os01g0121700

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Revision as of 04:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0121700| Description = ABC transporter related domain containing protein| Version = NM_001048413.1 GI:115434239 GeneID:4326045| Length = 64...")
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Gene Name

Os01g0121700

Description

ABC transporter related domain containing protein

Version

NM_001048413.1 GI:115434239 GeneID:4326045

Length

6489 bp

Definition

Oryza sativa Japonica Group Os01g0121700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1223012..1229500

Sequence Coding Region

1224084..1224269,1224578..1224662,1224763..1224975,1225114..1225334,1225511..1225642
,1226218..1226494,1226887..1227088,1227779..1227911,1228241..1228391
,1228484..1228674,1229167..1229382

Expression

GEO Profiles:Os01g0121700

Genome Context

<gbrowseImage1> name=NC_008394:1223012..1229500 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1223012..1229500 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtcaggggtctgggccagctcctggccgcgctcgccgcggcgctgttcgtccgcgccgtcgccggcccgggcccggcgctcctccctccggccgacgacgaggactccgacgccgacccggaggccggcggggaaggaggcggcgtgcctccggtgacgataaggtgggcccgcatcacctgcgccctcaagaacaagcgcggcgacgtggcgaggtttttgctgtcaaatgcgtctggggaggcgaaatcggggaggctgcttgcgctcatggggccatcagggtccggtaaaacgactctgctcaatgtgcttgctggtcagctcacagcatcaccttctttgcacctttctgggtttctgtacatcaatggccgacctatctcagaaggtggctataagattgcttacgtgaggcaagaggaccttttcttctcacagcttactgttcgtgaaacgctctcgcttgctgctgaacttcagcttcgccgcacgttgactcctgagaggaaggaaagctatgttaatgaccttttgtttcgtcttgggctggttaactgtgctgactcaattgtgggtgatgcaaaagtacgtggaataagtgggggtgaaaagaagcgtctctcccttgcgtgtgaactgattgctagcccttctatcatctttgcagacgaaccaactactggtcttgatgcgttccaggcagagaaggtcatggaaactcttagacagcttgcagaagatggacacacggtgatatgttctatacatcagccaagaggttcagtttatggcaaatttgatgatattgtactactgtcagagggagaagttatatacatggggccagcaaaagaggaaccgttattgtactttgcatcattggggtatcattgtccagatcatgtgaaccctgctgagttcttggctgatctcatttctgttgattatagttctgctgaaagtgtgcagtcatcacggaaaaggattgaaaacctcattgaagaattttctaataaagttgcaattactgaaagcaacagttcgctgacaaatccagaaggctctgaattttctcccaaacttattcagaagtccaccaccaagcatagacgtgggtggtggagacaattccgtttgctgtttaagagagcatggatgcaggctttccgtgatggaccaacaaacaaagtgagagcaagaatgtccgttgcttcagcaatcatatttggatctgtgttctggcgaatggggaaaactcagacttccatacaagacaggatgggacttcttcaggtaactgctataaacacagcaatggctgcactgacaaagacagtaggagttttcccgaaagagcgggctatagttgacagagaacgggccaaaggttcctatgcactaggaccatacctttcttctaagttgttggctgaaattcctattggggctgcattcccattgatatttggatccattctttatccaatgtctaaacttcatcctacattttctagatttgccaagttctgtggcatcgtgactgttgaatcatttgctgcatcagccatgggccttactgttggagctatggctcctacaacagaagccgccatggcccttggaccatcccttatgacagttttcattgtatttggaggatactatgttaaccctgataatacccccgtcatttttcgctggatcccaaaagtatccctaattagatgggccttccaagggctttgcattaatgagttcaaaggtttgcaatttgagcaacagcattcctatgacattcaaactggtgaacaggccctggagaggttttcattaggaggaatccgcattgcagacacgcttgtggcacagggtagaattctgatgttctggtactggttaacctaccttcttctgaagaaaaacaggccaaagtatcagcagcttctaccaccatctgaggaagatcaaaataagcagcaagttaaggaagtgaaatga</cdnaseq>

Protein Sequence

<aaseq>MEVRGLGQLLAALAAALFVRAVAGPGPALLPPADDEDSDADPEA GGEGGGVPPVTIRWARITCALKNKRGDVARFLLSNASGEAKSGRLLALMGPSGSGKTT LLNVLAGQLTASPSLHLSGFLYINGRPISEGGYKIAYVRQEDLFFSQLTVRETLSLAA ELQLRRTLTPERKESYVNDLLFRLGLVNCADSIVGDAKVRGISGGEKKRLSLACELIA SPSIIFADEPTTGLDAFQAEKVMETLRQLAEDGHTVICSIHQPRGSVYGKFDDIVLLS EGEVIYMGPAKEEPLLYFASLGYHCPDHVNPAEFLADLISVDYSSAESVQSSRKRIEN LIEEFSNKVAITESNSSLTNPEGSEFSPKLIQKSTTKHRRGWWRQFRLLFKRAWMQAF RDGPTNKVRARMSVASAIIFGSVFWRMGKTQTSIQDRMGLLQVTAINTAMAALTKTVG VFPKERAIVDRERAKGSYALGPYLSSKLLAEIPIGAAFPLIFGSILYPMSKLHPTFSR FAKFCGIVTVESFAASAMGLTVGAMAPTTEAAMALGPSLMTVFIVFGGYYVNPDNTPV IFRWIPKVSLIRWAFQGLCINEFKGLQFEQQHSYDIQTGEQALERFSLGGIRIADTLV AQGRILMFWYWLTYLLLKKNRPKYQQLLPPSEEDQNKQQVKEVK</aaseq>

Gene Sequence

<dnaseqindica>5232..5417#4839..4923#4526..4738#4167..4387#3859..3990#3007..3283#2413..2614#1590..1722#1110..1260#827..1017#119..334#ccccccccccccctcgtcttcctcctcttcactcctcgtcgcacgcgacgtgaaccttccagaagcttctagaacagtcgtcaggcctctctccgctcgtcccccgcgcgcgcgcgagatggaggtcaggggtctgggccagctcctggccgcgctcgccgcggcgctgttcgtccgcgccgtcgccggcccgggcccggcgctcctccctccggccgacgacgaggactccgacgccgacccggaggccggcggggaaggaggcggcgtgcctccggtgacgataaggtgggcccgcatcacctgcgccctcaagaacaagcgcggcgacgtggtgagtcgctctgcctcgaatcatccattccgttccctctcgccggaggagtcgcattggtcggcggcgctgcgcgcacggaaagaaaaaaaaaatcatctgcttaggattagccaggagagccgcgtgctgtctgagagactgacactgggccctacctgtcgatgtggcactgactcatcacattttagatgaacaggttgctgaaatttgtttcgcacttccgctgttggctaacgggctaagtaattgcgtggcattctgcagtctgtatgtagaattgtatattaatttgcgtcgaacaagtaatttgcgaaatttgtttcacactttcaccgtctgcactctgcagcttcaatcagtagatgaacacaccgaagctgtgtattctgtatgtagaattgtacattgagtgccatcaataatcggaatttcttgcttctgcgcgtctctgggtgattgttgtaatggttataacgtgctgcatgccaggcgaggtttttgctgtcaaatgcgtctggggaggcgaaatcggggaggctgcttgcgctcatggggccatcagggtccggtaaaacgactctgctcaatgtgcttgctggtcagctcacagcatcaccttctttgcacctttctgggtttctgtacatcaatggccgacctatctcagaaggtggctataagtaagcttaagctatgcttcttcagttggctttcacaattttttagtcaggtttacagagaagagctatactcattgcttttccttgtgtaggattgcttacgtgaggcaagaggaccttttcttctcacagcttactgttcgtgaaacgctctcgcttgctgctgaacttcagcttcgccgcacgttgactcctgagaggaaggaaagctatgttaatgaccttttgtttcgtcttgggctggtaagttatccatgatggtatatggtctgctttctaaagaaaaagttatccatgatggttaaaatgttcgaagaaattgaaccaattggttttagtgcactacatcaaatgttggatacgaacttgtagtttctagcactggtggagaaaatctgtcaaattacacatgaaaagcattgttattttggtgctcagatagatgacaagtatgctaagtttttcaattgatgggcagaacctacataatatctatcgctgtctgttcaagtatttccctttttattttgtatcaccaggtatttatttctttttattataactggttgtaggttaactgtgctgactcaattgtgggtgatgcaaaagtacgtggaataagtgggggtgaaaagaagcgtctctcccttgcgtgtgaactgattgctagcccttctatcatctttgcagacgaaccaactactggtacttttacctgactgtagtgtttatttaacccttccttggttgaataagcattctcatctcctcttaatgttttcgttaggaaatacatgactagttgcaagcaaatgttctgatcacttcttcaaatctactgtttctttgtaaatttgtgccatgcttcttttttttattggaaccagcacgagaatgtgctttttcattaaatatagcaggagaaaaatacagcccctaagggcaaagaaaaagaaaatttgtagccatgccggattcaagtgaaaatagattgccaatactgcgatagttgcattaaaatggcttcaatagatacaccacatttttctcatgccacaagaattgctttaagatgatgcatgtttcttgtactaagactgctactctaatggttaacacatgacatatcataatcttggtggcatctttaatcaagcaccatggtattgggacttgccttattagatttgtcattgaatgctgcaaacaaaatatattcttgatatgatatacaagctacatcccttctggacaaagtgttgcacatttactttatctgaagtgttgagcttccatgattagagatagcgcattcattggtcctttgatgtgacaaaagtgcaaaacataagtgagattgcataaactttgttcacatatgtgccatccttttaggtcttgatgcgttccaggcagagaaggtcatggaaactcttagacagcttgcagaagatggacacacggtgatatgttctatacatcagccaagaggttcagtttatggcaaatttgatgatattgtactactgtcagagggagaagttatatacatggggccagcaaaagaggaaccgttattgtactttgcatcattggggttggtattcgctcaccttttcctttacttggcatttcctgttgttttcgatgtgtgcattgtactgattttatttagactgtaatactctactaccttggtgcataacatgatagtggtcatatttgtccttgttagtggcactatccaaaattccagtgtacggtatgctagaattttactcagaattttaattaggcatgcagattctggcttgtgtacttgttcacaccataatggagattatcttgcttttataagttcttttatctattatcagatgtgttggtttctatattctatgtatactgtcaatatgctatgctgcttgtttttctgcctgctattattgcttatcaataacttgagtttgattacttcatatttttcaggtatcattgtccagatcatgtgaaccctgctgagttcttggctgatctcatttctgttgattatagttctgctgaaagtgtgcagtcatcacggaaaaggattgaaaacctcattgaagaattttctaataaagttgcaattactgaaagcaacagttcgctgacaaatccagaaggctctgaattttctcccaaacttattcagaagtccaccaccaagcatagacgtgggtggtggagacaattccgtttgctgtttaagagagcatggatgcaggttttattaaaattcatttaattctcagttgcagcttcctcttttaatctgcttcccgctgcttctttaaatcaagttgatatgtttatttattatttgctgtggaagttatcagatactcgtgaggcttcctttcaaaaaaatcgtttttcttacatattcttttagcctgagtaaactatatacataatgtaatgaatttaggaggtttagatcgaacatgttactatatttgagtttggatccatgatttagtttttgccaaatctgtgcctcaaaaaggtgtaatacgcaactgcccatgaaacatacttgtaaacaaaaaagaaacactttgctaatggaactatgaggatttggattgtggttgattgtaaacaaaaaggaaacactttgctaatggaactataaggatttggattgtggttgaggttatctgactaatgttcaagccttttatagtttgcctgggtacccattaataatctgagcgcagttgcttagatggggtttagctaaagatttactgccacgctgttgtgtctgatattggaataggaccttctgtgttttaggctttccgtgatggaccaacaaacaaagtgagagcaagaatgtccgttgcttcagcaatcatatttggatctgtgttctggcgaatggggaaaactcagacttccatacaagacaggatgggacttcttcaggtagaatatgttggattttttatgactcgttgagttgaatttgctaggttgcacatgcttcagattttggacttacattcattctcttcctaatattgactttggtacaagctttttcattgtgtctgagcatttttctgattttgatctgtccctttttcaatttatgagttaaggtaactgctataaacacagcaatggctgcactgacaaagacagtaggagttttcccgaaagagcgggctatagttgacagagaacgggccaaaggttcctatgcactaggaccatacctttcttctaagttgttggctgaaattcctattggggctgcattcccattgatatttggatccattctttatccaatgtctaaacttcatcctacattttctaggtaagtattatcctccctctaatttagaaatgaatctgaggcactttattacatgccacgcagaaatagtagaatatcgatagttcgatactattttgtttatgctccatcaaacaacattccatgctacactttcagatttgccaagttctgtggcatcgtgactgttgaatcatttgctgcatcagccatgggccttactgttggagctatggctcctacaacagaagccgccatggcccttggaccatcccttatgacagttttcattgtatttggaggatactatgttaaccctgataatacccccgtcatttttcgctggatcccaaaagtatccctaattagatggtaaccctcttccttatatcatattttggctcctaagctaggtgggaccgtgggatagttaatgaccctatatttcaactttgtttgccattgatttcagggccttccaagggctttgcattaatgagttcaaaggtttgcaatttgagcaacagcattcctatgacattcaaactggtgaacaggtacggttgttcatgtggacctgcaaaaggcagttttacatttttactgttacaaaaatgcagacacacacttggttaagtgccagtgagatattgctcgacctaagttaatgtttgaatgataatgcactcaaacagaaaattggcccagacactattcatgtgttatcatcacattcaattaaaaatctgaattgaaaattttccttgaattgtaactggggcctgggtaaaaaggtgaacctttggcatatctttcttctatggaggggaagtgatctgcttttgacacattacttctatggcaggccctggagaggttttcattaggaggaatccgcattgcagacacgcttgtggcacagggtagaattctgatgttctggtactggttaacctaccttcttctgaagaaaaacaggccaaagtatcagcagcttctaccaccatctgaggaagatcaaaataagcagcaagttaaggaagtgaaatgaagtgctgccagcaacattttgccagcaaaggtaaaagagacattagcattaaccacgtttcacacaatggtcctaatctcctgaaatattttttgtcaggatgtactgcaattagaaaacgtaactgttgtatcatattgagcattagttgtatggccctttttgtagttaatattctttttgtagcatctgaatgggaaattatggcctaaataattttgggggtagcaagcattccttcattctatagtcttgcatctatagaagacttatccccattcccagaatgactgtcttgttatcaagcacatcgtttttagttgcccagaaatgcattgtcatcaagttgttgtacccacttagattaacattgctagaagccgagaactctgaagcctttataagatctaattgctacagatatggtgtttgggaagtagtttagttgacagtagcataaatcaggaatcatgacccatgttgtaaacttcaagatccatgcatcttgtgtttcttgtgacctctaggcactcaattctgcaattgcttcaagtcttgaacccttgagcccatttgagtagctttgctgatgatgccatatactaatatctccttgaccatgtgccaactgatggcagctagggatctgcactagcattcaggctatgtgataaacaacttagccaatagtatgatagtactataatttctcctctttgccaattgctaactgttttctttttttttttcttatcagagagaagctgcaccttcttcacagcatctcggcatgagaatgagaggatcactaaatcatgcggcaataaaacaattagccgcccaagcccatcactttgaagcagtacatcaactcaactgaatgattaatttcctcttttcttttttgtcaagcaagtactcgtagtaatagtattcaactcaataatgggagatggccggtgttggttggaagcgacgagtcgctgcattcgatgtgattacttctaaactatttattgttccatgattccttccctgaataaatcaccggccaaaatgtgccatgtggact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0121700, RefSeq:Os01g0121700