Os01g0126200

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Revision as of 04:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0126200| Description = Conserved hypothetical protein| Version = NM_001048431.1 GI:115434275 GeneID:4326011| Length = 8437 bp| Definition ...")
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Gene Name

Os01g0126200

Description

Conserved hypothetical protein

Version

NM_001048431.1 GI:115434275 GeneID:4326011

Length

8437 bp

Definition

Oryza sativa Japonica Group Os01g0126200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1436163..1444599

Sequence Coding Region

1436426..1436582,1442705..1444210,1444312..1444406

Expression

GEO Profiles:Os01g0126200

Genome Context

<gbrowseImage1> name=NC_008394:1436163..1444599 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1436163..1444599 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cgacggcggcggcggcggccggctgctggacccgggcaagctggagatgttcgtcgacgagctgccggacatgccgaggatgcgcggctacggcgtggcggagggcggcaagctcgtcgccggcaacctcaccatcggcatgtacgagaccatgtggaaattccaccgcgaccttccggcgacgcgagtcttcgcctacgggaccagcaaggagaccgccacggtgccgggccccaccatcgaggccatgcagggtgtccccacctacgtgacgtggaccaaccacctcccgccacgtcacttcctcccgtgggaccccaccctcaccgccgcggcacctggcagcggcgtccccgccgtcgtccacctccacggcggcgtgcagcactccggctccgacgggcactcgctcgcctggttcaccgccggcttcgccgccaccgggccgcgcttctcgtcgccggcggcgtacgagtaccccaaccagcagcctcccggcaacctctggtaccacgaccacgccatggggctcacccgcgtcaacatcctcgccggcctcctcggcgcgtaccgcgtggcctccccggcggaggaggcggcgctcaacctcccctccggcgaggcgttcgaccgcaacctggtgctgttcgaccgcgacttcctcgccgacggctcgctgttcatgaaccgcacggggaacaacccgagcgtgcacccgcagtggcagccggagtacttcggcgccgtcgtcgtcgccaacggcaaggcgtggccgtacctccgcgtccgccgccgccgctaccgcctccgcatcctcaacgccagcaacgcgcgcttcttccgcctctccctctccggcggcctccgcttcgttcacgtcgcctccgactccgtctacctcgccaggccggtgcccacccgcgcgttcctcctcgcgccgtccgagatcgccgacgtcgtcgtcgacttcgtcgagtccggcaacgccacggcgatcgtcctgcggtccgacgccccggcgccgtaccccggcgacccaggcgacaaggcggagaccgtgccggtgatgaagttcgtgatcgacgacgacgacgacgcgttgtcgacggagccggacacgtcgagcgtgccggcgaggctgacgtcgccgtcgcagtacgccaagccggacgcgagggaggcggtgctgatgcggcggatcgccatgtacgagtacaccaaggagggcaccgacgagccgacgcacctgtacctgaacgcgaggtcgtacatggacccggtgacggagacgccgagggaggggacgtcggagctctgggacgtgatcaacctcaccgacgacaaccacccgcttcacgtccacctggcgctgttcgtggcgctggagcagaggtcgctgcgggacgtcgacgacctcaaggagtgcatgatggcgcggggcagcggcggcggcggcgcggacgcgtgcgggctggagcggcacctcgccggcgggaggaagcacgtggtgccgaagcaggagcgcgggtggaagaacgtgttcaaggtgcggccgggcacggtgacgaggctgctggtgcggttccggccgctgtcgccgccggacagccgccgcttccccttcgacgtcgccgccggccccggctacgtctaccactgccacattctggaccacgaagacaacgagatgatgaggccgatgaagattgtgcgctagtacgtgtccataggaattatgtatgcacttcagtaacataa</cdnaseq>

Protein Sequence

<aaseq>RRRRRRPAAGPGQAGDVRRRAAGHAEDARLRRGGGRQARRRQPH HRHVRDHVEIPPRPSGDASLRLRDQQGDRHGAGPHHRGHAGCPHLRDVDQPPPATSLP PVGPHPHRRGTWQRRPRRRPPPRRRAALRLRRALARLVHRRLRRHRAALLVAGGVRVP QPAASRQPLVPRPRHGAHPRQHPRRPPRRVPRGLPGGGGGAQPPLRRGVRPQPGAVRP RLPRRRLAVHEPHGEQPERAPAVAAGVLRRRRRRQRQGVAVPPRPPPPLPPPHPQRQQ RALLPPLPLRRPPLRSRRLRLRLPRQAGAHPRVPPRAVRDRRRRRRLRRVRQRHGDRP AVRRPGAVPRRPRRQGGDRAGDEVRDRRRRRRVVDGAGHVERAGEADVAVAVRQAGRE GGGADAADRHVRVHQGGHRRADAPVPEREVVHGPGDGDAEGGDVGALGRDQPHRRQPP ASRPPGAVRGAGAEVAAGRRRPQGVHDGAGQRRRRRGRVRAGAAPRRREEARGAEAGA RVEERVQGAAGHGDEAAGAVPAAVAAGQPPLPLRRRRRPRLRLPLPHSGPRRQRDDEA DEDCALVRVHRNYVCTSVT</aaseq>

Gene Sequence

<dnaseqindica>264..420#6543..8048#8150..8244#attctctcctcacatcatcttgatagattttttttttcactcaatggaagcaagaaagaacctaaaccagaaccaaaattaggagtcaaaaacacattggctgaaaggtccagcttgtcccattgatctctcttcactgaaatccaaagaaaccaatctaggagtactatctagcttgctgcaatggagaagagaaggtttcttggagtgtgcttgcttgtggcagtgttggtgttgcgggcggcggtgctcggccgtggtgacgacggcggcggcggcggccggctgctggacccgggcaagctggagatgttcgtcgacgagctgccggacatgccgaggatgcgcggctacggcgtggcggagggcggcaagctcgtcgccggcaacctcaccatcggcatgtacgagaccatgtgggtaagtacgtgaacagaattgcagaaatgatacagttcctggcacttggattttcttgtcttctctctttaatttgttttgattattatgtgacgcatatcgtgatggcaacctgagtttggtacgatacggttgttcattttattcatagctcagcccttgtttatttccaaactttttcttcaaacttctaacttttccgtcgcatcaaaacttttctacacacacaaatttctaatttttttatcacatcgtttcaatttcaaccaaactttcaattttagcgtgaactaaatacaccctcagtagtagtgaaaattctcagaaatgaaaacgttagctgaaaactggaaacagttcatgaaaaagtaggcaaaacctgaagatctactgcaggtagcttagtgcctgaaagtttaagtacagacagtaactgctgccaagtgccaactgagcagaagctcgtcatgcacttcgggcactctcgatcctactagtactagcaaactggagtagctatgcctatactacagtatggtcattgctaaaattctaggcttcgagcacttttaggacaaatggacattctattgtctagacagctcgaaaatgtttgaaagctacgtgtatttcttcagaaacaatttttttaaggatattgcactatatctttcagcagtagttgtactgtataacgtctctcaaaaacaagatatccagacctaatcaaatgatttttcttttaaagaaaggggctcacaagtcacaagaaacgcaagtattttaggacctggccaatccacaaatcacagggtcacgtaccactaactgcggttcacaagaactctgcaaatcttattcactcataagtcctcatgcataaaagtaagatcagcctcggattatgaaagcaacacaagcagctgatatttcttttagcactgttactgcctaaaatttcatcacgaagtcatctttagtacagtagtggtctattttgcttgaacggttacactcagagggcaataaaggtccgaagaaaattttttgcatcaacaaacaatccgtatttcaaagatgcagctgctaatagcctaccataacaagtacaaaaatatcgcatttcctttttagttcccccaaatttgatctgattagtgacagatgtttgcacaagaaaagtaggcctactctgtgctgtcatgcagtgtctttgcaaagtggagggggacctctgttactgttaaatccgatgtggaaatcctgtactaaactgagctaaatttcactccattcttttaaatcaggataagatgatgctgattctattctacaatcatgctacaattaaacatttcaatcttcagagggaccctccttttctacactagaacatcaggacttcctagaatttcttcagcatctagcttttcagaactttctgtctttcttttacacacacaattcttaactttatctgaaaaaacacacaactcttgtgatgaaatggatcgcattcacgggccacgactgaccgctcactcacgttggaagtcgtgacacaggtcagcccctgtctgtgtcgctcatggcccccaccttatcgtcagagatgaaaatggcagaccattgttcagagttcttcgatggaatcctttctactttctctgaattctcattcacgttaaactttaggaagactttctagcagcatgatgagtttgtgcctgtttcacttcttcacaatgtcagcatcctaatggccaaatcgcaatgcactaaccttcaattagaagctaacttgatatcttgagcacagcaaaaggtagttcagagttttgtaatccccttttctgctttctctgaatctccaagcaaatgctgtacggtataggtgtccaaacgggcggcgcggcccggcccggcacgggcacggttccggcacggcccgtttcggcacggcccgttaggcacggctgatgaaacgggccgtgccgtgccggcccacgtgccgagccgccggcccaagcacggcccgtggatggccgggccgtgcccgtgccggcacggcacacctgcggcccacgggccgttcggggcacggcggcccgtgaaggcaggccgccagcccgccagcctgcagtgcacagtgtttttttttaaaaaaaagcaaaggaaatgtataaggaaaaaaaattaaaaatggaaataaaatgtttaaaaaaaagtaatgatttactaatgttaaaaaatgaaaaaatggtatttaaaaaatggaaataaaagttttttaaaaaagtaatgatttgctaatgttaaaaaaaagaaaaaatggtattttttttgttgtgttgaaaaatttaaaaatatagattgtgattcattattttgaaataatttaaagataaatccacacttgcgaaaatattgcaaaagaatttgttaaaaatagtaatgacctttattgatgtttatatcattacaggatacaatgatacatgctgcctcgttaaaaactttgtcatgtaaaaactcataggggaaaatgagaaaaccatgacaaagaaaagagtacagctcaaaggtcagaactacttctaacaaaattctactggggttggtctggatccaggtagagttgctcgaactgagcagccaattcttggttgtccgcagtgtattgggcatgttgtcgagcaagctcccagtctttaacgcttagtagcatttcgacgtggtcgctgcgcagagtcgtcctccggtcttcgatgattcggccgcatagactgaaggccgattcggaggacaccgtcgacacgggcaccgtcgacacatcccgtgctagttttgaaagcacaggatatgttatcttgtggtcattccaccacccgaggacgttgaaatcttgtgcttcgtggtggatggcgtcgctgtccaaataaccggacaactcttcggccacaacatgcgaagaggcgtctccacttgtagccgacgaactgccaccaccttggattgaacttgaagacgatccaccccaaatcctaccccactgtatcttcttcttacctatagtggggataggagggggtctctgctggcgaacttcctgaaactttacttcatatcttccaaaaacctcatataatttacgtctaacctcagtataaaaagaactataatctacacctatagtatctccaacaagtgataaaatagcagacaatccccttaatttacacctaggatctaaaacaaaagcaagagcatacaacataggtatatttttccaatatttcaaatatttttgtttcatgtgaaagacaggttcagttagaacgtcatcattttcgtattctttaaataaagtagcaatttcaagaaggttgtgcaaaattatattagcagttggataataaacttgtgacaaagttagagtacaatcataaaaagtttctagaaattggtaaaatttttggacaattgcccaaacatgctcgttcagtactgaagacccgtcactgtttcttgggccaccacgtgactgaacaaaatcagaaagtaaactactataaggtaaaacaacttttaacattaaatacgttgcattccaccgatgctctgcatcggtggcaaacttacgagctttcacaccggccgcattgcaaaaacctcttccatgcagcaatccgcgggttagaagcagttaaccacgcgattgcttgacgaacagcatcgatgtggtcacctaccctcttcatgccagtcttaacaatcaaattaattatatgacatgcacaacgctgatggagtagaaaagattgagcatacacacaaaataaaggttgcaatatttcaatagccctagaattagcagatgcattatctagggtgacagcaaatattttatcagcaagattaaattcattaattacttccctaattctttcagctatgttttctcctgtatgtgagacatctattaacctaagccctaaaactctcttttgtaattgccaatcatcatcaacaaaatgaacaactacgctaagataatcctctctagctctactactccatatatctgaagtaacactaacagagaaagtacatgtactaaacagttccttaagtgcagttgcttccttgtgataaacattctctaaatctctagttgatgtttgcctactcacagctttaaacctagggttatgagattgctgaatgtaatgttcaaaagcaggggactccccaaagttcaggggtaaatcttgcctggcgattaaccggacaagagattcccgagcaaccatgggatcgtactcccaactgcgtaccgtaccgtctgggtttaccataagttgctgctgccggagttgtattccttgcttcttggcacacgactccgcatggcgcttgaggtgacctgtaccaccagaagaacgagcagataaaatttgcctacatattctacaacgggctttcgatacctcccttccgtcggggcatgtttcctttatctcgtcgaagctttgccacacaccggaggttctcgatctcttcgagccggtgtgtgtcgaaacacttccgctcgcggttccggaaaatccttccgaagctgtctccgcctgaaccggtacctcctcaacgacagccgtatgaaccggtacctcctccacagatggtggagttggagccgatccggaggtaccgtcaaaccccgacatgtagttggggtcgaaatcacccaaggtgaacgacggcgactggtatggaaagttcggatccattctgaaaatttaaaccgacataaacaaattttcgaatatttattgaattcacaaacacaatacaaataatacacaaatttgaatattacttacatctttccaaccgcgagctcttcaaacctctgcgatcaaactgttgaactacgaaactaattttgatttttgacaaaatttgagcaaattttgtcaaaatcaaaaaaaatgcacacttgagaacaaagagagcacttaaaacacttgagagcacaagatgaggagtgtgggatgaggagaaatggctggggttcatgccctatttatagggcgaaatttgagattttttggaattttttcgaaatttttatgaattttttagcctcccaacggttattttcaaatttgaacggtcaaatagccgttagtgccacgtggcgccttcccattcgaccgccgcccgccctgtccgcgcctgacgggccgccggcgtgccgtgccgtgccggcccgctacagtagccgtgccgtgccgtgccggcccgcgggctcggccagcggcccaagcacggcacggctactcgtgccgtgccggcacggcccgttactgtagcaggccgtgccgggccgtgcctgctacaggttcggccgtgccccgggccgcccgtttggcccggcccatttggccacctctactgtacggtaactctttagactttcctgcagcaatgcagaatgatgcgtttatatccgtctcacagtgccaacatcgtatattgctgtaatacactaatacattgacttcagattaggagttagtaataattgcgtaatgtaatttttttatggttaactgtgtaatgtactcctcagggagtccgggttgataatattagtcgttttggataagggtaaaattaaactttaaaatctttgactacaaataatttctaaaatattcatcttaaaaatatgaaaatcatatgtagattagtcttaaaaagtacttaaaatcatatatttgttaatatttctatatatattataatagaaaataattaatcactccgtttcacaatgtaaatcattttagcattttccacattcatgttgatgttaatgaatctaggatatatatgtctagattcattaacattaatatgaatgtaggaaatgctacaatgacttacattgtgaaacggaaaaagtatcaaaattactttttgaagaccgtacctttatccaaaacgataagtattatcaacccggaggaagtaattttgtaattttgtaaatgcaatagatagtagtgctagagaagtgaaattgttttttttgaaccattgtttttttttggcagaaattccaccgcgaccttccggcgacgcgagtcttcgcctacgggaccagcaaggagaccgccacggtgccgggccccaccatcgaggccatgcagggtgtccccacctacgtgacgtggaccaaccacctcccgccacgtcacttcctcccgtgggaccccaccctcaccgccgcggcacctggcagcggcgtccccgccgtcgtccacctccacggcggcgtgcagcactccggctccgacgggcactcgctcgcctggttcaccgccggcttcgccgccaccgggccgcgcttctcgtcgccggcggcgtacgagtaccccaaccagcagcctcccggcaacctctggtaccacgaccacgccatggggctcacccgcgtcaacatcctcgccggcctcctcggcgcgtaccgcgtggcctccccggcggaggaggcggcgctcaacctcccctccggcgaggcgttcgaccgcaacctggtgctgttcgaccgcgacttcctcgccgacggctcgctgttcatgaaccgcacggggaacaacccgagcgtgcacccgcagtggcagccggagtacttcggcgccgtcgtcgtcgccaacggcaaggcgtggccgtacctccgcgtccgccgccgccgctaccgcctccgcatcctcaacgccagcaacgcgcgcttcttccgcctctccctctccggcggcctccgcttcgttcacgtcgcctccgactccgtctacctcgccaggccggtgcccacccgcgcgttcctcctcgcgccgtccgagatcgccgacgtcgtcgtcgacttcgtcgagtccggcaacgccacggcgatcgtcctgcggtccgacgccccggcgccgtaccccggcgacccaggcgacaaggcggagaccgtgccggtgatgaagttcgtgatcgacgacgacgacgacgcgttgtcgacggagccggacacgtcgagcgtgccggcgaggctgacgtcgccgtcgcagtacgccaagccggacgcgagggaggcggtgctgatgcggcggatcgccatgtacgagtacaccaaggagggcaccgacgagccgacgcacctgtacctgaacgcgaggtcgtacatggacccggtgacggagacgccgagggaggggacgtcggagctctgggacgtgatcaacctcaccgacgacaaccacccgcttcacgtccacctggcgctgttcgtggcgctggagcagaggtcgctgcgggacgtcgacgacctcaaggagtgcatgatggcgcggggcagcggcggcggcggcgcggacgcgtgcgggctggagcggcacctcgccggcgggaggaagcacgtggtgccgaagcaggagcgcgggtggaagaacgtgttcaaggtgcggccgggcacggtgacgaggctgctggtgcggttccggccgctgtcgccgccggacagccgccgcttccccttcgacgtcgccgccggccccggctacgtctaccactgccacgtaagtacaactacactgctccgatgatctatttgttaactttttttaacgatcaattaatcagctaaagatttacttagcttgttcggttggaaatgcagattctggaccacgaagacaacgagatgatgaggccgatgaagattgtgcgctagtacgtgtccataggaattatgtatgcacttcagtaacataattttgtgccatactcctacataggattgggatcctctgacgttctgacgacgtggtgactgacatgtgagccccaccgcttgtgggcccacctgtcagtgaccacgtccgtgtgcagttcacgttagaggatccggttcctcctatatatgtgtatctacccacgtgaacatacacatgtgcatttcaaagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0126200, RefSeq:Os01g0126200