Os01g0127900

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Revision as of 04:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0127900| Description = Mannose-6-phosphate isomerase, type I family protein| Version = NM_001048442.1 GI:115434297 GeneID:4325991| Length =...")
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Gene Name

Os01g0127900

Description

Mannose-6-phosphate isomerase, type I family protein

Version

NM_001048442.1 GI:115434297 GeneID:4325991

Length

5467 bp

Definition

Oryza sativa Japonica Group Os01g0127900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1533135..1538601

Sequence Coding Region

1533219..1533536,1533658..1533825,1536228..1536440,1537434..1537700,1537947..1538267

Expression

GEO Profiles:Os01g0127900

Genome Context

<gbrowseImage1> name=NC_008394:1533135..1538601 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1533135..1538601 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggccctactcctcctccgccggaggaggagccctcctccccttccctgcgcctgcgctgcgcggtgcagcactacgagtggggccgacgcggggaggcctccctcgtcgcccgcctctccgacgccaacgccgacgaccacggccccgaccccgcgcgcccctacgccgagctgtggatgggcacgcacccctccgcgccctcctccctcctcgccgacggcctcctcagggactggctcgcgcgccaccccgccgcgctcggccccgccgtcgccgctcgctggggaggcgacctcccattcctcttcaaggttctgtcggtggccaaggcgctgtcgatccaggcgcacccggacaaggacctcgccgaggtgctgcacgcgctgcgtccggccacctacaaggacggcaaccacaagcccgagatggccatcgccgtcaccgagttccgcgtcctctgcggctttgccggtatccaggaacttaaggacgttttaagaactgtgcctgaagttgaagaccttgttggacctgaagatgctgccaagcttttgtctgtgaaagagtaccatggtgtcaatgaagtaaaatcctgtctgcggtcagcttttactaagctaatgacagctagtaaagaagcggtttctgaagcaattacaaaattgatttttcgcctgaatgctgagagcaaggtaaggaccttaaccgagaaagaaaatctagttttgtcgctggagaaacaatacccagaagatgttggtgttctatcagcatttttcttcaattatatcaagctcagtcctggtgaagcactttacattggtgccaatgaaccacatgcatatctatccggggaatgcattgaatgtatggccacttcagataatgttgttcgtgctggtttgacacccaagtacagagatgtgcaaactctttgctctatgctaacatacaaacaggtctttccagaaatcttgcggggggttcctgtacagccgtatgtaagaaggtacacccctccgtttgatgagttcgaagttgactgctgctcactaccaccaggcgaactggttgtgatatccccagtgtcaggtccatccgtctacctagtgatggccggggaaggcgagatccaggtagattccatgccaaatggtgaaaagtctaaacaaggtgatgttttcttcgtgccagcatacaccgaggttaagttctctgcctctggtcctgagtgcatgcagctgtacagggctggggtcaatagcagattcttcaattaa</cdnaseq>

Protein Sequence

<aaseq>MAGPTPPPPEEEPSSPSLRLRCAVQHYEWGRRGEASLVARLSDA NADDHGPDPARPYAELWMGTHPSAPSSLLADGLLRDWLARHPAALGPAVAARWGGDLP FLFKVLSVAKALSIQAHPDKDLAEVLHALRPATYKDGNHKPEMAIAVTEFRVLCGFAG IQELKDVLRTVPEVEDLVGPEDAAKLLSVKEYHGVNEVKSCLRSAFTKLMTASKEAVS EAITKLIFRLNAESKVRTLTEKENLVLSLEKQYPEDVGVLSAFFFNYIKLSPGEALYI GANEPHAYLSGECIECMATSDNVVRAGLTPKYRDVQTLCSMLTYKQVFPEILRGVPVQ PYVRRYTPPFDEFEVDCCSLPPGELVVISPVSGPSVYLVMAGEGEIQVDSMPNGEKSK QGDVFFVPAYTEVKFSASGPECMQLYRAGVNSRFFN</aaseq>

Gene Sequence

<dnaseqindica>85..402#524..691#3094..3306#4300..4566#4813..5133#atctccattcccaacccaaacccccgcaaccgcaaatcccgcgctgctagtgctacctagggttcgcctccctcctccctcccaatggccggccctactcctcctccgccggaggaggagccctcctccccttccctgcgcctgcgctgcgcggtgcagcactacgagtggggccgacgcggggaggcctccctcgtcgcccgcctctccgacgccaacgccgacgaccacggccccgaccccgcgcgcccctacgccgagctgtggatgggcacgcacccctccgcgccctcctccctcctcgccgacggcctcctcagggactggctcgcgcgccaccccgccgcgctcggccccgccgtcgccgctcgctggggaggcgacctcccattcctcttcaaggttaggcgctaccaccatttgcttccttccaatctggttttgccgcgtcaaacactcgctctcccgtacgactcggcgacgctgactttggcgtgccacgcgcccacacctcctcgtgcaggttctgtcggtggccaaggcgctgtcgatccaggcgcacccggacaaggacctcgccgaggtgctgcacgcgctgcgtccggccacctacaaggacggcaaccacaagcccgagatggccatcgccgtcaccgagttccgcgtcctctgcggctttgccggtatccaggtacctgttcaaactcccaaaatccgttacgcgcttcttatttttcgggtttatcagccacagtccccccccccctgaattttagtaatgtcagttgaaacgcacccgaaaaggccgagtactctttgactccttctaatgtaccactggatcgatgatacgctacagtcgattatataggagtaatttttttatgcaaccgccaaaattccttcgttgccccaaatcgaattgagggtggagtatttgactttagtgaactgattaacagagtgtcatcattgaaaggtctcatggataaattagttgatataaggagtggttccatgtatttattggcagcgacaaatgaataaatgatgcgtagtgttcttgactgacaagtggaatgaactgttagcaagtaccagactgatgaccttgtacataaaaatgtgcaatagggtttttagttagaaaaggaataataaaacaaatattcgcctagaattaccgagtgtgctgaacaaaagcagagagtgcactaattatcttcattatgttgcattctcctttcattgaatagtgcttaggcacgtagctttcaggcgacagtttatttttatttttattttttgaaaactttcaggtgacagtttagggaatgaattaaacttcatatggttcaaaaatcaaaatgcagaaacaggacctaagaatccaaacatgcgagtgatgttgaattctgtacttgtaagaaactaagaatgatgcttcaacaggttgtcacacgcatacctcatgggtcagcatttgcatatgcttgctcttttttttttttaaaaaaaaactgggtgttttcatcattatgcgaatgggtgtcaaacccatgacttcacgcctgtgcacccctggagtccatctggaactcatcgaaggccctacctttccaaatgatattgtatgatacacgtggaagtgtttgctagcatcttccgtatacaaaaaaaaagcagcagttattaggagtatatggatggtaaatttggggagtaataaatttgaactgcgtgtccgagaaaatctagtgggatgataatttatagattaatgaatcatatatgtagtatgtagttcagtaatgactgtacaatggaaaattgatgagatcataattcacattccatatcttgtggcatatgattaagcaatccttcagagattttttggattaatgatcattaatattggaaaaacactttttttatgtataaattatgttttagaaaggtttgtgtcaacatgaaagcttgtcgtgcagttttaaactcctgcatttcatgtctgttataactttttttttgttgttattcaaaatattgacttttgtcattattgttcctgttaatcaaggccttttacttgcttgttgaatttgcactttccgttgaaaagcaatcataatatctgtggaatctgagtgcaggcatctaggttatgagtaggtatttaaagggtcatttaagaaattattatcagatcagaaccagggttccaaatcctagtggtaactggtaactgttcatttaccagaattaggcatgtcaaagttcctgtggaagcaggcttgcacgtgagaaatcctcaaattcctatggaggtggtcagcaggtcagggatgaactctccacatgggaacccgctgatatggttttaagatttctctaagcgttggtgttagcatacactatgtcggtttatctattccttgtcccgttaccacgcctgaatagaattcaactatgactggctttagttaatttatgtggtgtttcagaagaattcaagaagcagagttttttctctctagtgtgtgtagatctatggtacttgaaaaataaagggaaaacacacacacacacacacacagaaaaaaagaggaaattggaagcattgcactagaatccagagggaataatcaggtagtggcttcctggtgtgttccaggatttgtctgcattctgagatttgggactctggttatatccatagcctttggtctcataatagttatatgttctctctttagaaaacaaaagttttctgtcattgtagtgtcagatggcatacatcttgggttcataacccacttttaatgggtttttgtttgtttgttagtgctagttgagatttatttgaggtgtgcataatgttagcaggagcagagtatatattacagtgctgtttgggagagcttcttccagcataccacaatccctgtcatttaattaacaaaaaccacatatcttttttaagattacgcaattttactggcagtcatagatgcttccttttttttctttgaatagctacaggtataaatctgccttgttcattaatgtactgtctatacaatgttgaaggaacttaaggacgttttaagaactgtgcctgaagttgaagaccttgttggacctgaagatgctgccaagcttttgtctgtgaaagagtaccatggtgtcaatgaagtaaaatcctgtctgcggtcagcttttactaagctaatgacagctagtaaagaagcggtttctgaagcaattacaaaattgatttttcgcctgaatgctgagagcaaggtaaaaatatgaaatcaactagaatggttgtggatatctgcattttcacatgacatcaaatattagaaccttcccatattttatggaaatacaggcttttcattctttggatcttcattttctatgcatttacattatcttacactcttaccagtaaaatgtgccatgaacatttctcttcattatctttccaaatgaaagttaggttctgttctctcctgcttgaaagttatgcggtggttctttcgtatacgatgctaaacctatcagtggttaatgagatgttaaagtgcacagatgatgtttaaatggctttaatgctttgttttaccaatgctatgccatatgcaatgctcttgttaacgaggtcatatctagtactctgacatgcattctccttgtttgagacctctgataaatgtgggactgaacatggggtctaaccccgcagcacatagtgttaaagacgtaacttgcaaaatgacattgttcattgttttccaagttaaaatttattttgtttcaaccgcatggacttgactcttcgagacatggaaacatagtattgattactaggcagtgtcaaagcactgaacagtagaaaatatatatcatgacatttacttttcttacattcatgtgctgtgattgcgttgctatgctacttaattgagttattagttacatgggttgtaattgggaggaaaacaacaaagggggaaggtaaatataattgcacccatgagcagcaattcatgctattgtttttgtttaaatcgtccattttattgaacattgcataaaacaattcctgttttgttatccccattatacaaaacgttcccttaggagttatcatcttccaagtaaccctttctttacagcaatatgaagcataactaactagagtacctttttttaaagagaatttaatgaatacaggtcaagcctgagattctatctgtactgataatgatgtcatgatctattcaggtaaggaccttaaccgagaaagaaaatctagttttgtcgctggagaaacaatacccagaagatgttggtgttctatcagcatttttcttcaattatatcaagctcagtcctggtgaagcactttacattggtgccaatgaaccacatgcatatctatccggggaatgcattgaatgtatggccacttcagataatgttgttcgtgctggtttgacacccaagtacagagatgtgcaaactctttgctctatgctaacatacaaacaggtgagttacagaagtgaaaccatgacaatttctaattttgatcacatgccgagacctaggaaggatgctttcccaaggtctgcagaagttctgagaattcgtcgtcccaggacccaggctacaagccagcactgacatatgtattgtgctatgatgcctatgcatctttgatctttattaaacagtgaataccatagtgaactccacaaagttgtcgcaatgatcatcaaaaatatccttttgcaggtctttccagaaatcttgcggggggttcctgtacagccgtatgtaagaaggtacacccctccgtttgatgagttcgaagttgactgctgctcactaccaccaggcgaactggttgtgatatccccagtgtcaggtccatccgtctacctagtgatggccggggaaggcgagatccaggtagattccatgccaaatggtgaaaagtctaaacaaggtgatgttttcttcgtgccagcatacaccgaggttaagttctctgcctctggtcctgagtgcatgcagctgtacagggctggggtcaatagcagattcttcaattaatttagtgactgctgaaagagttccacacacaattgctgtaggtaaaaggtcagtgcttacaaaatacaagtgaaatgatatgactagttagcaaaagttaccatatgtactgtataggtcaacaaaagaataagtcaggttccttcatatcttgattatttgttcttccaaagaggtctataccatagcgttcctcacgcatccagatccatctgaatggagaggattacagagaataactttcagccattctattctattacattgtagttcagaactaaaatgtgaactggtctcaagctttgacaccgaatatagttggaaatacttacag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0127900, RefSeq:Os01g0127900