Os01g0128100

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Revision as of 04:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0128100| Description = Similar to Bifunctional nuclease (Fragment)| Version = NM_001048444.1 GI:115434301 GeneID:4325993| Length = 3937 bp|...")
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Gene Name

Os01g0128100

Description

Similar to Bifunctional nuclease (Fragment)

Version

NM_001048444.1 GI:115434301 GeneID:4325993

Length

3937 bp

Definition

Oryza sativa Japonica Group Os01g0128100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1561618..1565554

Sequence Coding Region

1561779..1561873,1561977..1562050,1562140..1562207,1562279..1562371,1562521..1562604
,1562697..1562752,1562843..1562950,1563051..1563224,1563299..1563422

Expression

GEO Profiles:Os01g0128100

Genome Context

<gbrowseImage1> name=NC_008394:1561618..1565554 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1561618..1565554 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcagtcgatcatgtcgacgctgccccttctgctgctgcttctcttctcctcgctcttccctgctccctcgcacgcctggggaatccatggccatctcatcgtctgccagatcgcgcagggccggctgagcgacgcggccgccgcggcggtgaggggcctgctgccgtcgtacgccgggggcaacctgagcagcctctgctcctgggccgacggcgtcaagctcaggtacccctggtcggcgccgctccactacatcgacaccccggaccacctctgcagctacacctacgacagagactgcaaggacgaggatagcttcagggggaggtgcgtcgccggcgccatcaacaactacacctcccagctcctcacctatgatgcaacatccccttctactcaatataacctgacacaagcacttctgttccttgcacactttgtgggggacatccaccagccgcttcatgtggggtttacctccgataaaggaggaaacaccattgatgtgcactggtatacaaggaagactgttctccaccatgtttgggatgacaacatcatcaaaacggcagaaaacgactactatggggaaggcgtggctgaatttgtcgatgcactgatgcagaatataacgggagaatggtcacaacgagtgccaggatgggaagaatgcagcaagaaccagaccacatgcccagacacgtatgcatctgagagcatcgctgcagcatgcgactgggcgtacaaggacgtgacagaagattcactcctggaagatgcatatttcgggagcagattgccggttgtgaatctcaggctagcgcaaggcggcgtcagattagctgccactctgaacagaatattcagttaa</cdnaseq>

Protein Sequence

<aaseq>MQQSIMSTLPLLLLLLFSSLFPAPSHAWGIHGHLIVCQIAQGRL SDAAAAAVRGLLPSYAGGNLSSLCSWADGVKLRYPWSAPLHYIDTPDHLCSYTYDRDC KDEDSFRGRCVAGAINNYTSQLLTYDATSPSTQYNLTQALLFLAHFVGDIHQPLHVGF TSDKGGNTIDVHWYTRKTVLHHVWDDNIIKTAENDYYGEGVAEFVDALMQNITGEWSQ RVPGWEECSKNQTTCPDTYASESIAAACDWAYKDVTEDSLLEDAYFGSRLPVVNLRLA QGGVRLAATLNRIFS</aaseq>

Gene Sequence

<dnaseqindica>3682..3776#3505..3578#3348..3415#3184..3276#2951..3034#2803..2858#2605..2712#2331..2504#2133..2256#gggggtgttggcgtagtggagaggacgagaccagtagtagtggaatcgcacctcgtcggcccacgggcacaccgtcgacagctccccgccggccgactccggcagcagctcctccaccgccgccgccgccttctccgacaggtacttctgcaagtacaacactccgtgttactctctagctgcagcctcttcaggtgctgtgcgaggagaggaggaaggggattagcaaagccatggtgtgcggagacctcggcgatcttgcagacgatgatgtggccctgcttgccccacgcctccgcacgccgaggcgccgcggtgagggagacgacggagacgaaggcggcgagaggcagcagccggaggcggagcagaggcgctgcgagtgccatctccggtggtggtcagctcagcctcgccggagtggttgggtcgtgggctatttattgggcggagaaagagcacgagaggagaaggtaacgtagcggtggcatgggctgggctagtgggccaagattatccggatgggccggatgcttgtgatgctgagggcaatttcggcccataaattttatacagatttttatcatgccgacaacagtctctggcgtttttatcggagaaaatttccagactacgacatgatacattgctactcctgccaaatttgttgctccattttttttctcatgaaatcaattggtgaggctgattttcatacaacgacaacactggctttgtttgagttcattgtacatgaagattaagtgtaaaacatgtaaaatgagaaaatcattagcttgattaagtttaaattattttgaacttaaaaaatggatttatctgatattttatagtaatttatatatatatttctttttttttgcaaaaaaatgtattgtttagcattttgaaaagtatactaatggaaaccacgagtaaaatatgtatcttaatagaaaaaaaaggggcaatacagctatgcagctagctgttgcattcatcctgcaggagaaaaacacacacactgaataacaaacactgctgtgaatgcacggacatggcaccaggagggtccagcagtagtcaggcgtgtgcatgggtatgaacatggcctcaattttcagcagcgtgtgaacgagattgccggccgtgcatgctccgtagttccgacagattcctcatcctctttccctttcttaaaataatggcgcgaaatgatacaatattccggaattcctattgggtgggtgatcgctcctccatccacccagcgatcactcccctgcctctctcctatactatatactcctccctcctctccccccttcctcctccccttcttctctttctactacagtacaccacacaaaactttttaaaaaacaaaagttagaaaaatttatgtatagaaatactatttataaaaaatttgaattcaaattcaaatttgaattgggcatgtaaacttttgacttataaactttggatctatacattttaggtgtataaactttagatgtatagaaataatatatatagaaaatatttgaattcaaatccaaattcaaatttgaatttgaatataattcaaattcaaatttgaatcgggtatataaactttaggtgtataaactttagatgtatagaaatactatatatgaaaaatatttgaatttaaattcaaatttgaatcggatatttgaattcaaattcaaatttaaattggatatataaacttttgacttataaactttaggtatataaactttatgtgtataaactttagatgtatagaaatactatatatatatataaaatatttgaattcaaattcaaatttgaatcggatatataaacttttgacttataaacttttggtctctaaactttagatgtgtaaactttaggtgtataaactttaaatgcataaatttactaaagtaggaaagtaatgaggtgccaaaaaaggaaacaggtggagggagggagggggggcggggggcgacccgatcgctaccaggtaggtaggaactaccccactattcccgcttaaaaaccccatcaccgaggcactgatactgatcgatcgtctagctagcttcttctacctcgcatccgatcaggaattcaggatgcagcagtcgatcatgtcgacgctgccccttctgctgctgcttctcttctcctcgctcttccctgctccctcgcacgcctggggaatccatggccatctcatcgtctgccagatcgcgcaggcacgcacattcttccgtcttcttcctcgatctgctcctcgccttctttcatctgatcgtctcgtctcgtgcagggccggctgagcgacgcggccgccgcggcggtgaggggcctgctgccgtcgtacgccgggggcaacctgagcagcctctgctcctgggccgacggcgtcaagctcaggtacccctggtcggcgccgctccactacatcgacaccccggaccacctctgcagctacacctacgacagtttgttgattttgtcctcaaattcgactgaaatttgcatggacatgctgtcacattgtagcagcatgcatcatgttggtttcttgtgttgcattgtcaggagactgcaaggacgaggatagcttcagggggaggtgcgtcgccggcgccatcaacaactacacctcccagctcctcacctatgatgcaacatccccttctactcaatgtaatactgctccatttaattcagttctgcaattttttttgccttgttagtctcaggctgatgataagtttctgatcttgagttcttcagataacctgacacaagcacttctgttccttgcacactttgtgggggacatccaccaggtacacccaaaaaaatgtgattagtacgctctgtaagtacttgtatagtagactagtgtagtaattagtgtttaatcatttggagatgacagccgcttcatgtggggtttacctccgataaaggaggaaacaccattgatgtgcactggtatacaaggaagactgttctccaccatgtaagtccaatgttcagactaagcatcccactgcaaaaagcattcagactagcatcccacttcccaaaagaaaaaaaaatcagataaagcatggatatgactgtgacaaaatcaattaggaatcctttgtctttggtattgtcgttcaggtttgggatgacaacatcatcaaaacggcagaaaacgactactatggggaaggcgtggctgaatttgtcgatgcactgatgcagaatataacggtatgaaaaatggttttctggtgtgcttgaggcaactagcagctcgatctacttactgcttgatgtttcagggagaatggtcacaacgagtgccaggatgggaagaatgcagcaagaaccagaccacatgcccagacacgtatgctttcacatccaaaagttcatttctgaatttccacttaacttgattgatttctggctgtaactgattacaactatatatgcaaggtatgcatctgagagcatcgctgcagcatgcgactgggcgtacaaggacgtgacagaagattcactcctggaaggtaatactaccattagcagtgccatttacgtttgatgcagagttaaacacttcagaaaatgtcctgaccacgggtttattgctcttgattgctgctgttgcagatgcatatttcgggagcagattgccggttgtgaatctcaggctagcgcaaggcggcgtcagattagctgccactctgaacagaatattcagttaaaggaagacgaactgcatacatcagacagttctctctcgaaggaagatttttattttctctgttttgctgtgtgccaaaatctcgagagatcaattttactatttccttgtcatgataaatcgaaatatattcttgagcatgtgtgaaatgggacttattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0128100, RefSeq:Os01g0128100