Os01g0129500

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Revision as of 04:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0129500| Description = Protein of unknown function DUF1666 family protein| Version = NM_001048452.1 GI:115434317 GeneID:4325971| Length = 2...")
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Gene Name

Os01g0129500

Description

Protein of unknown function DUF1666 family protein

Version

NM_001048452.1 GI:115434317 GeneID:4325971

Length

2916 bp

Definition

Oryza sativa Japonica Group Os01g0129500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1640234..1643149

Sequence Coding Region

1640581..1640832,1640936..1641132,1641243..1641608,1641826..1642224,1642313..1642719
,1642814..1643094

Expression

GEO Profiles:Os01g0129500

Genome Context

<gbrowseImage1> name=NC_008394:1640234..1643149 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1640234..1643149 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgtaatgcgagcggcagcagctgctgctctcgggtggcggcgccgttgcatgcgcaagtgcttggctcgccgtctccttctcatggctacggcggcgccggcgacggctgtcttctgcaggcacctcccccggcagtcgtctgcggggagatgctggcactgacgacgccggcgccgccgtctcttctccatgcactggcctccctcaacgtcctcctcctcgtcgcctacctcctcctcttcctcctcgccaagctcgccgccggccttcaccgccgaggccatggtagctgtgacgagcaccaggtcacggagacctccgggagggaggagttcgccggcgccgacgacatcgccggagtgcagcagcagcaagcggagatgctgttctggttcgacgaggccgtgttcgaggacactgctctgcttggtggcgaaggaaaggatcagctcatgtacgacgctgccaccacaccacctacacctacacctgcacgttgcttgcaggtggagagcacctttcccatggtggaatccacccgacgaatctcgccgcaccatcgccagtgcagcttcagccatgaggagcccaaggccgccgccgccgccgccgccgccactgcgtcgagccagaaggatatcattccggccgccgtgccatcaccggagaacgttcccgtcgaagccggggaagaggacggccatggcgaacacggagaagaagacgatgaggaggagaagaggtttaggggagatgacgtgaagctgttcgtgaacagccgggcgctcgccgacacgaagaagctgcttctggagggcgccatggccgggaaaggaggagtgcagcgcgagcgcgaggaggagagcaggttgggcgcgtcgacgctgacgagcgagtcgacgtcgaagagctcggtggagtggcggagctcgacggtgaccaaggactcggagacggagtaccccttctcgtcgtcgtctcgccggagctcgtcgcggtgggagtcgtacgctctcttccgcaagtacgacgaggacatggtctacttccatcgcgtcggcgcccagaagctcaccgagacagagtcgtacaggtcgataaagtatcagccgcgatcggtgtcggagcggatcgtgcagaagctgacgccgaagccgcggccggcgatcgggctgagggacccgtacccggagctggagcgggtgtacgtggcgcagatctgcctcacctgggaggcgctcaactggaactacgccagcttccgccgccacgccggcgacatcgcggcgaggtgctgcccggcgcgcgtcgcgcaggagttccagcaattccaagttcttcttcaccggttcatcgagaacgagccctacgagtacggactccgcccggaggtgtacgcccggatgaagaactcatcccccaagcttctcctcgtcccagagttcagagatgaggaggacgagaaggacgatctgatatcggcggtgcagttcttgtacatactggaggagtcgatcagaacgttcatggcgttcctgcgtgcagacaagaggagccactaccaaatgttcagagaaatggtgaagaggaggaccagctccatggatcagactctggtcatcaccctcaagaaggccaacaagaaaaagaagagccggctcaaggacctgacgaggccaagacggtgtctgaggaggacgaagctgagggaagaagaggagatgtcaatactgctgggcttaatcgacctcaagatcgtggccagagtgctgcgaatgccggagatcaccgatcagcagctgcactggtgcgaggagaagatgaacagggtcaaagtcgacccggctcagggcaagatgcagagggacccgtctcctcttttcttccctgcacattga</cdnaseq>

Protein Sequence

<aaseq>MRNASGSSCCSRVAAPLHAQVLGSPSPSHGYGGAGDGCLLQAPP PAVVCGEMLALTTPAPPSLLHALASLNVLLLVAYLLLFLLAKLAAGLHRRGHGSCDEH QVTETSGREEFAGADDIAGVQQQQAEMLFWFDEAVFEDTALLGGEGKDQLMYDAATTP PTPTPARCLQVESTFPMVESTRRISPHHRQCSFSHEEPKAAAAAAAATASSQKDIIPA AVPSPENVPVEAGEEDGHGEHGEEDDEEEKRFRGDDVKLFVNSRALADTKKLLLEGAM AGKGGVQREREEESRLGASTLTSESTSKSSVEWRSSTVTKDSETEYPFSSSSRRSSSR WESYALFRKYDEDMVYFHRVGAQKLTETESYRSIKYQPRSVSERIVQKLTPKPRPAIG LRDPYPELERVYVAQICLTWEALNWNYASFRRHAGDIAARCCPARVAQEFQQFQVLLH RFIENEPYEYGLRPEVYARMKNSSPKLLLVPEFRDEEDEKDDLISAVQFLYILEESIR TFMAFLRADKRSHYQMFREMVKRRTSSMDQTLVITLKKANKKKKSRLKDLTRPRRCLR RTKLREEEEMSILLGLIDLKIVARVLRMPEITDQQLHWCEEKMNRVKVDPAQGKMQRD PSPLFFPAH</aaseq>

Gene Sequence

<dnaseqindica>2318..2569#2018..2214#1542..1907#926..1324#431..837#56..336#tgtggaagtagtagtaggagcaagaggcaaattaaggggaagctgcaggtggtagatgcgtaatgcgagcggcagcagctgctgctctcgggtggcggcgccgttgcatgcgcaagtgcttggctcgccgtctccttctcatggctacggcggcgccggcgacggctgtcttctgcaggcacctcccccggcagtcgtctgcggggagatgctggcactgacgacgccggcgccgccgtctcttctccatgcactggcctccctcaacgtcctcctcctcgtcgcctacctcctcctcttcctcctcgccaagctcgccgccggccttcaccgccggtgagtgagtgacagagctagcttcagttcagagagatctttgtgccattaattgcatggacgtgtcacatttttactgtgcgtatgtatgtagaggccatggtagctgtgacgagcaccaggtcacggagacctccgggagggaggagttcgccggcgccgacgacatcgccggagtgcagcagcagcaagcggagatgctgttctggttcgacgaggccgtgttcgaggacactgctctgcttggtggcgaaggaaaggatcagctcatgtacgacgctgccaccacaccacctacacctacacctgcacgttgcttgcaggtggagagcacctttcccatggtggaatccacccgacgaatctcgccgcaccatcgccagtgcagcttcagccatgaggagcccaaggccgccgccgccgccgccgccgccactgcgtcgagccagaaggatatcattccggccgccgtgccatcaccggagaacgttcccgtcgaaggtataaccattaattccactaacctctattacttcttgttaaccatgcatttcatcctggttctgacactcgtcgtacgtggttgcagccggggaagaggacggccatggcgaacacggagaagaagacgatgaggaggagaagaggtttaggggagatgacgtgaagctgttcgtgaacagccgggcgctcgccgacacgaagaagctgcttctggagggcgccatggccgggaaaggaggagtgcagcgcgagcgcgaggaggagagcaggttgggcgcgtcgacgctgacgagcgagtcgacgtcgaagagctcggtggagtggcggagctcgacggtgaccaaggactcggagacggagtaccccttctcgtcgtcgtctcgccggagctcgtcgcggtgggagtcgtacgctctcttccgcaagtacgacgaggacatggtctacttccatcgcgtcggcgcccagaagctcaccgagacaggtacatactaattattcttccaaaatcaagtcatcattaccactcattacccaagctagattaattaaacctttctcgagaaacataaacctcaatcaaacgacgcaattccagctccctgcaactctttctctacacacaatggggctcacacaacaaaaaatatttacagaaagtttactgatcagttgcgtttgctggaacggttaatttgcagagtcgtacaggtcgataaagtatcagccgcgatcggtgtcggagcggatcgtgcagaagctgacgccgaagccgcggccggcgatcgggctgagggacccgtacccggagctggagcgggtgtacgtggcgcagatctgcctcacctgggaggcgctcaactggaactacgccagcttccgccgccacgccggcgacatcgcggcgaggtgctgcccggcgcgcgtcgcgcaggagttccagcaattccaagttcttcttcaccggttcatcgagaacgagccctacgagtacggactccgcccggaggtgtacgcccggatgaagaactcatcccccaagcttctcctcgtcccagagttcagaggtaactaactaatttctctgatggaattgaccaaactttattgttttgttagctgatttagagtagctgagaattgagtagtgcgttgttaatttttgaaaatattgcagatgaggaggacgagaaggacgatctgatatcggcggtgcagttcttgtacatactggaggagtcgatcagaacgttcatggcgttcctgcgtgcagacaagaggagccactaccaaatgttcagagaaatggtgaagaggaggaccagctccatggatcagactctggtcatcaccctcaagaaggccaacaagaaagtgagccacataaataaacatcacacacaatgctgatcagattttctttcatcatcatcattaattccactttcttctcattgcctgaaaatgaaatcttcagaagaagagccggctcaaggacctgacgaggccaagacggtgtctgaggaggacgaagctgagggaagaagaggagatgtcaatactgctgggcttaatcgacctcaagatcgtggccagagtgctgcgaatgccggagatcaccgatcagcagctgcactggtgcgaggagaagatgaacagggtcaaagtcgacccggctcagggcaagatgcagagggacccgtctcctcttttcttccctgcacattgacagcagcatcagcagctgtaactagctagtccctgcttgtaatctactacttttttcttgcccatctcctcttcaaatcttcctttgttgatatagtgagaaaaagataaagttgcatagacgacatgagaatatgcatggcacgcagctagcctgatctagttctgtaaaaagagagtcagagatcgatgaagagatcgtgtaaaggcaatatatgtgtacttatgtatttatacatagtagataaataagagacccacatcaatcttgtagttgggtgcatgtgatgtggtgggggtgagatactataaatttgatcgttgcatgcatgatggattttggaatct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0129500, RefSeq:Os01g0129500