Os01g0130500

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Revision as of 04:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0130500| Description = Similar to Alpha-xylosidase precursor (Fragment)| Version = NM_001048458.1 GI:115434329 GeneID:4325977| Length = 199...")
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Gene Name

Os01g0130500

Description

Similar to Alpha-xylosidase precursor (Fragment)

Version

NM_001048458.1 GI:115434329 GeneID:4325977

Length

1990 bp

Definition

Oryza sativa Japonica Group Os01g0130500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1699523..1701512

Sequence Coding Region

1699789..1700865

Expression

GEO Profiles:Os01g0130500

Genome Context

<gbrowseImage1> name=NC_008394:1699523..1701512 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1699523..1701512 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcctggtagttgagcgtgtacaggtaagggagcagcctgtaccgcatgccgagcgcgttccgagccgacttggccacggactcccacacatacagctcctgcctcggcgacgcgaagttggcatggtccctggagaacgggtagaacgcgccgagctcgatccaccggttgcagagctcctccgtcggctgcgggtagaacccgcagatgtcggcgccgaccatcggcatgccgaagatgccgaagttgagcatggtggagatggagtagcggagattctcccaggtgcccttgttgtcgccggtccagtgcgcggcgtaggcgcccgacccgacgaacgtagagcgcgtcaggatgaacggccgcttgccctggagcccctgcagcgcctggtgcgtcgcgatggcctgcgagaatccatacaggctgtgcgcattgtactccaggatgccattgtagtgcgtcgcgctggtggcgatggtgttgaagccgagccgcgccgtctggccggaggcgttgatcttgtacggcggctcgtcccacctggtgttcgtcaggttcttgcagtccaagcagcacacccatggcgtcgtcgtgttgggcagagggcacaggtgcgtcgtcgggatctcgcatttcccggtgcagaagttggatgcctcgttcatgtcgatccagaggccatccacgggcacaaggtcatgaaacctcctcacctcgtcgatccaccacgagacgccattggggttgaggaagtccgggaagtagacggggccgggccacacctgcgccaggtatggcttcccgtccagcttgatgaagacgtcgccctgcatgccgcgctggtacacgccataggtgttgttcacggcgatgccggggtcgatgaggacaatgtacttcatgccctgtgcatggatcttgtcaaggaattccagcagcttgggacgcgggtagttcacgggatcaagggtgaaatccttcgcggcgtccatgtgatcgtcgtcgttccagatcacgtcgagggggatttgcgcgttccggtagccctccacgacgccctcgaccactga</cdnaseq>

Protein Sequence

<aaseq>MRLVVERVQVREQPVPHAERVPSRLGHGLPHIQLLPRRREVGMV PGERVERAELDPPVAELLRRLRVEPADVGADHRHAEDAEVEHGGDGVAEILPGALVVA GPVRGVGARPDERRARQDERPLALEPLQRLVRRDGLRESIQAVRIVLQDAIVVRRAGG DGVEAEPRRLAGGVDLVRRLVPPGVRQVLAVQAAHPWRRRVGQRAQVRRRDLAFPGAE VGCLVHVDPEAIHGHKVMKPPHLVDPPRDAIGVEEVREVDGAGPHLRQVWLPVQLDED VALHAALVHAIGVVHGDAGVDEDNVLHALCMDLVKEFQQLGTRVVHGIKGEILRGVHV IVVVPDHVEGDLRVPVALHDALDH</aaseq>

Gene Sequence

<dnaseqindica>648..1724#tcggcacctgcaaagtacggcctcgacgttgcaatggcggtggcgttcgcgccatcgacatggacggcgaggtccctgcctgttccctccagtccgagcacggacagcttctcgatgaggagccccttctgcaagctgtagctgcctagctccacctccgacctcaccgtcaccgccttgccgcgcaccgtcgcgtagaagcggacgtacgtcgcctgcccctccgcgagcaccatctccggccgctcgtcgtcgtcgacgtacacggcgccctcggcctccgcctcggtggcgccgaacgggaacgcgaccaccagcgtgaacggcgtcgcgcgggcctccttggagatcgtcccgccgcgctgcatcgggaggatcgtgttctggaacacgtgcacgttgatctcgttgagcggcgcgtccagcttcacggcgccctcgcccctggacaccaccaccttggtcgtgtcgaacaggttgtaccagctccccggcgggaacatggcgctcaccgaggtggcgccctgctcgagcaccggcgacaccatgacgctcgcgccgagcaggtactgcgtgctcagcccgtagcacggcgtgaagtccgggaacgagaagaacaccggccgcgccaccggagcgccggtgagatgcgcctggtagttgagcgtgtacaggtaagggagcagcctgtaccgcatgccgagcgcgttccgagccgacttggccacggactcccacacatacagctcctgcctcggcgacgcgaagttggcatggtccctggagaacgggtagaacgcgccgagctcgatccaccggttgcagagctcctccgtcggctgcgggtagaacccgcagatgtcggcgccgaccatcggcatgccgaagatgccgaagttgagcatggtggagatggagtagcggagattctcccaggtgcccttgttgtcgccggtccagtgcgcggcgtaggcgcccgacccgacgaacgtagagcgcgtcaggatgaacggccgcttgccctggagcccctgcagcgcctggtgcgtcgcgatggcctgcgagaatccatacaggctgtgcgcattgtactccaggatgccattgtagtgcgtcgcgctggtggcgatggtgttgaagccgagccgcgccgtctggccggaggcgttgatcttgtacggcggctcgtcccacctggtgttcgtcaggttcttgcagtccaagcagcacacccatggcgtcgtcgtgttgggcagagggcacaggtgcgtcgtcgggatctcgcatttcccggtgcagaagttggatgcctcgttcatgtcgatccagaggccatccacgggcacaaggtcatgaaacctcctcacctcgtcgatccaccacgagacgccattggggttgaggaagtccgggaagtagacggggccgggccacacctgcgccaggtatggcttcccgtccagcttgatgaagacgtcgccctgcatgccgcgctggtacacgccataggtgttgttcacggcgatgccggggtcgatgaggacaatgtacttcatgccctgtgcatggatcttgtcaaggaattccagcagcttgggacgcgggtagttcacgggatcaagggtgaaatccttcgcggcgtccatgtgatcgtcgtcgttccagatcacgtcgagggggatttgcgcgttccggtagccctccacgacgccctcgaccactgacaagttcttgtatccccatctgcattggtggaaccctgagaacaagcatgtgagaagaacattagagagtcgcatcgttatctgaaacgaattatttggtatttgcatatttgttttgcagtacaatttagagcaccgactctgcatttttttttgttggttaattactgtcttgatctgatcctgtgcagcgggagccatattttatcgatgtgctgacagttaaagttagtacttatgatctgcatctggcaatatgtgcatct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0130500, RefSeq:Os01g0130500