Os01g0132800

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Revision as of 04:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0132800| Description = Peptidyl-tRNA hydrolase family protein| Version = NM_001048470.1 GI:115434353 GeneID:4325801| Length = 4591 bp| Def...")
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Gene Name

Os01g0132800

Description

Peptidyl-tRNA hydrolase family protein

Version

NM_001048470.1 GI:115434353 GeneID:4325801

Length

4591 bp

Definition

Oryza sativa Japonica Group Os01g0132800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1812011..1816601

Sequence Coding Region

1812340..1812456,1813082..1813158,1813236..1813294,1813618..1813691,1813782..1813832
,1814856..1814923,1816119..1816203,1816306..1816554

Expression

GEO Profiles:Os01g0132800

Genome Context

<gbrowseImage1> name=NC_008394:1812011..1816601 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1812011..1816601 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgcttgccgtggccactcccgcctccgcccgcctctccccgctcaccacctcctcccccgaaccctgccgccgccgccgcctcctcctctccgcagccgcccctctccggcgcacccgtctccggcgccgcatcgccgtcgtcgcgtccgtccccgaccccgcggcgcggccggcggagtacacgccctggctcatcgccggcctcggcaaccccggcagcaagtaccacggcacgcgtcacaacgtggggtttgagatggtcgatcgcatcgcgcgagacgaggggatcaccatgaacacgatccagtccaagtcgctgctcggaataggttcgattggggaagtgcctgtcttgttggtaaagccacaatcatatatcaactacagtggggaggcaattggacctcttgctgcctattatcaagtaccattgcggcatatccttgtgatgtatgatgagatgagtctacccaatggtgtattgcgtcttcaacggaaaggtggtcatggtcgccataatggcctgcagaacgtaatggaatgtttggacagttcccgtgaacttcctcgtttatctataggcattggtagcccacccggcaaaatggacacgcgtgcttttcttctgcagaagttcagttcagaggaacggctgcagattgacactgctttggagcaaggggtggatgctgtgagaactcttgtgttgaagggttttagtggaagtattgagagattcaatctggttcagaagtacaagttccacagtgtttga</cdnaseq>

Protein Sequence

<aaseq>MSLAVATPASARLSPLTTSSPEPCRRRRLLLSAAAPLRRTRLRR RIAVVASVPDPAARPAEYTPWLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNT IQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLRHILVMYDEMSLPN GVLRLQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEE RLQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFHSV</aaseq>

Gene Sequence

<dnaseqindica>4146..4262#3444..3520#3308..3366#2911..2984#2770..2820#1679..1746#399..483#48..296#gaaatctcctctcgccctatcggttccgcttctcctctcccctcgccatgtcgcttgccgtggccactcccgcctccgcccgcctctccccgctcaccacctcctcccccgaaccctgccgccgccgccgcctcctcctctccgcagccgcccctctccggcgcacccgtctccggcgccgcatcgccgtcgtcgcgtccgtccccgaccccgcggcgcggccggcggagtacacgccctggctcatcgccggcctcggcaaccccggcagcaagtaccacggcacgcgtcacaacgtaagcgggatgccttctctcgttgcgcaccttcctgtccgatttgagatgctcaccctctcaccgctttgtgctcgcgttcgcgttcgcgttcgtgattaggtggggtttgagatggtcgatcgcatcgcgcgagacgaggggatcaccatgaacacgatccagtccaagtcgctgctcggaataggtaccgtactctcttgttgcagtggagtggactattttgtttcatgctagggatctagttgtgcagtaatgtctgctgttgcaactggtatctaaattaagtcccgtacttggtaacagcagctagacctacattttagctgaaatcacagtagttgaagcaattgatttggtgcagaagaccacattgacctttgtatgagttattgggatgtcaatttagagtttggtgacgtaaaaacatgttttcagcaagttttaacagaacgaattcaatgttttactggttaccaacttaccaatcttattctgatatggagcccctgccttttctactctcgagttctgtccttgtggaatactggcggggatgtttttcatgaactcacaatatttactccaaatttcagcagttcttagttttagcgaaactggatttcgttgtctacttctctccactgccttttgcagttcctccaaatccaacttaagaaatattattgtttttcagacttaagattcaatgaatataggtactgtattctttggccttttgtacagggataacttatttttttaggatagcacaagttatttaatttgattgcatttaactgtgaaagttctaagaaacaatcttcatgtttaagaacaatcaaccatatatttctgccgattgacagggatgttgtttggaagtaccccatcccatatgttgagctaaagccaagtatgctcatgtcctatttctatttgaaaacccagaacttcatatttgcattgaaagtttaatttgcagattggatatccgaccattctatcatgtctgatctacagttgcactgagctgtcgtttctttcattcacatataatgatcacaatacatactgtactacagaggatcattgttaaaattgccttcattagtgctctcatgcctttatttagtattagtaatattgttcagattgtcggaacttggaagtactaaatatgtgcagcagcatatgtttgatgcaccaattactcctgaagaaagtacaataacctctttcactgaagtttgtctagtccactgaatatttttttcttgctggaagtatagtctcatgaactgcagtatgtatagcagtcagcgtcataatcttgttattgatattgtaaattcctgttgttcggtggaatttttgtgcaggttcgattggggaagtgcctgtcttgttggtaaagccacaatcatatatcaactacagtggggaggcagtaagttcttactattgtttttttttaatttgcaatttttagcttgtgaataataaaaagcaacttcatactggctactacaaataaaggcctctttagagggctctccctcattgttttcccataaaaaaatttgtctgcaggtaagttactcatagaaatagcagcctcttattttcaaaagaaatgcgacatatttttatgtgccaaactttgtcgtacatgacctgttataaaatattcagggcagctgaactataaaattaactttttgatctgtttggttctatgccaatcttagccaagccatttttttgggcaatggcaagatttggtcataccaaaattcttggcaaggttgttgattggattgttgccttttcttttttttggcaagactacctaagctttgacttgtattgcaccgaaagggatgccaaataatttggcaatgccaattttttggatctaaaccaaatgaatgcaaaaaaaattggaatgcaaaatttttggcatggttgagttgggcaatgatccaaacaggcccttcattcttttttttttttgaaaattactgcctgctagcaattttgacaaaaataagatcaagtaaacacaaacctttcctaaatctttgatcaagtaaacacaaattaatctctaattaataagaaacaagatgagtctgcggggatcttcaagttatatttctacctttagactctcttattaattaattaatagtaactttcaaagcagaagtactttgaattgggaacatgatacaaaaggaaagcaccaaatgttgataatatttggaatgaataaaaaatatacctcagcatataactccttatttctgctcttttttttttcttaaaatatcatgcattatgtcttatggtgaaatgagactataaattgttgttaggacttaaggatcacctgttttcttcattctaatgtcatataatttcttgcaacttctcaaatcaccctgtacgatcgtgctatcttgtgaagattggacctcttgctgcctattatcaagtaccattgcggcatatccttgtggtacatcttgtcactgttcttgcgctgatttatggctggtattgagtagcatgtgcttgcaactaacatcagtatgttctgtttactaagatgtatgatgagatgagtctacccaatggtgtattgcgtcttcaacggaaaggtggtcatggtcgccataatgggtaatatccaagtttccaaatatcttatacctttctcagtatcgtacttgaatgtgagttgatgaaatcttcgaaaaggtggatagctgcattgggtttaaatgcttcagtatgcttgcgcctgttcagctttactctatatagagaaaattgttaatttctttcttgagaggctctatggagcctgttagtctgcttataagtattatgtgtttgacatagctgtctatgtggtcctaaactcctaatagttagagacgttaccttttattaatccaataccctgacatcgcttcacattaaccagtttctgtgaaaaacagcctgcagaacgtaatggaatgtttggacagttcccgtgaacttcctcgtttatctataggtacgtcaccatgttcaccatgcattctctggaaattcatattggaccaatattgagctattgactgctggatataggcattggtagcccacccggcaaaatggacacgcgtgcttttcttctgcagaagttcagttcagaggaacggctgcaggtattgctttgctctatgttttagtgttttgtagaagatatgccatatagtgtgaaaaactcttgcctgtaatttcttgtctgctgtgacctattttttctctgcttcaccatgttcttccctcctttcgctctccagtaatgctccagtacagctgtagtgataacaggctagcgctattataaatttattataattcatcataaaaggataaaagatagaaacaggaaaaagataaaagatgtcctaccatttggttcgatcaccacaatcgatgcacattgatattggatgtaagttgtaatgttcacactttgtagaaatgttcatgtgcaaactcatcttatttatatacaaagaataagcttccaggttgaagagactaatactttggagtaccacaactagatccccccgaccccccaaccaggaaaaagttggttctggaaaagaacattagggatcttaccttttgctttgtcattataaagaaaaaaaactgctgttagttaaccctcaagttttcacattttccattgagcctctatttttctcagagcaactctatgatatggttgttgcttcttgaatagtgatctaaatttgttctgtaaatttgatcaagattgacactgctttggagcaaggggtggatgctgtgagaactcttgtgttgaagggttttagtggaagtattgagagattcaatctggttcagaagtacaagttccacagtgtttgagaattattaagaggcttggatatacttgctgaggacgcataaatacgcatcatcaatatcattggaagtgtcggacgtggtactttgcacaatctacgtaagtgcactaagttgcttctgcagtatcctataattttgaggatgctaagaaacttgcagggtgtatataggtagagtacttttgcattctttccttagagcaattttcattagagaggtagttgtgacctctaattttgttcatatgtaagctacttattaagtataagaggtagcatatacaatacaccacctctacactagctttattacactaaccccaataatct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0132800, RefSeq:Os01g0132800