Os01g0133400

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Revision as of 04:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0133400| Description = Similar to Hexose transporter (Fragment)| Version = NM_001048473.1 GI:115434359 GeneID:4325804| Length = 4840 bp| D...")
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Gene Name

Os01g0133400

Description

Similar to Hexose transporter (Fragment)

Version

NM_001048473.1 GI:115434359 GeneID:4325804

Length

4840 bp

Definition

Oryza sativa Japonica Group Os01g0133400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1843263..1848102

Sequence Coding Region

1843263..1843509,1844583..1844694,1844841..1844908,1845165..1845297,1845404..1845503
,1845610..1845722,1846095..1846188,1846273..1846426,1846597..1846743
,1846819..1846892,1846985..1847073,1847161..1847275,1847569..1847751

Expression

GEO Profiles:Os01g0133400

Genome Context

<gbrowseImage1> name=NC_008394:1843263..1848102 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1843263..1848102 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggcgggcagcagcagcacgtcgtcgtcgctgcgcgcggtgatcggaagtcgccggcgatcgcggcgccaccaccagcgaccgtgcggatgccgggccgcgtgctctgctgcggcatgaggtcgcgcggggcggatctcgccggcgtcgagatggcggcggggccgcagccgcagggcggcgtctcggggctcttccgcggcccgcgctcgagcccgcgctactcccgcgtgcgcgccaccgccacagttgatcctgaggatattccattggagaaggttcaagctaaatcttctggaagtgttctgccatatgtgggcgttgcttgtttgggggctattttatttggttatcatcttggagtggtcaacggcgctcttgaatatcttgcaaaggaccttggaatttctgagaatgctgtgttacaaggatgggtggttagcacaaccctggctggtgcgacagcaggttcttttactggaggtgctttagctgacaaatttggacgaacacggacgttcatcctggatgcaatccctctcgctgtaggtgcattcctgagtgcaacagctcatgatgttcgcacaatgattattggccgattacttgctgggattggtattggcatatcttctgctcttgtgcccctttacatatctgagatttcacccactgaaatacgtggagcacttggttctgttaatcagctttttatctgcattggaattcttgctgctctggtagctggattacctctggcaggaaaccctgcttggtggaggacaatgttcggaatttcaattgttccatccattttgcttgctcttgggatggctgtttcacctgaaagccctcgttggctattccagcaaggaaaactttctcaggcagaaacagctattaaaaaactatatggaagagaaaaagttgctgaagttatgtatgacctaaaagctgccagccaaggttcttctgagccagatgctggctggttggatcttttcagcaaacgctattggaaagttgttagtgtgggcgcagctatgttcttgttccaacagcttgccggtataaatgctgttgtatattactctacatcggtgttccgcagtgcaggcattgcatctgatgttgcagcgagtgcccttgttggagcagccaatgtttttggtacaatgattgcatcttctctgatggacaagcaaggaaggaagagccttctgataacaagcttttctggcatggctgcctcaatgttacttctatcattgtccttcacgtggaaggctttggcaccttattcaggccctcttgctgttgctggcactgttttgtatgtgctgtcttttgctcttggagctggcccagttccagcattgctccttcctgaaatatttgcctccagaataagggctaaagctgttgcattatctctgggcatgcactgggtttcgaacttctttattggcctctacttcttgagcgtcgtcaacaaattcggaatcagcactgtgtatttgggatttgcatctgtttgcgctcttgctgttgtctacatagctggaaatgtggttgagaccaaggggcgttctctggaagagattgagcgggctctaagttcagcaagctga</cdnaseq>

Protein Sequence

<aaseq>GGQQQHVVVAARGDRKSPAIAAPPPATVRMPGRVLCCGMRSRGA DLAGVEMAAGPQPQGGVSGLFRGPRSSPRYSRVRATATVDPEDIPLEKVQAKSSGSVL PYVGVACLGAILFGYHLGVVNGALEYLAKDLGISENAVLQGWVVSTTLAGATAGSFTG GALADKFGRTRTFILDAIPLAVGAFLSATAHDVRTMIIGRLLAGIGIGISSALVPLYI SEISPTEIRGALGSVNQLFICIGILAALVAGLPLAGNPAWWRTMFGISIVPSILLALG MAVSPESPRWLFQQGKLSQAETAIKKLYGREKVAEVMYDLKAASQGSSEPDAGWLDLF SKRYWKVVSVGAAMFLFQQLAGINAVVYYSTSVFRSAGIASDVAASALVGAANVFGTM IASSLMDKQGRKSLLITSFSGMAASMLLLSLSFTWKALAPYSGPLAVAGTVLYVLSFA LGAGPVPALLLPEIFASRIRAKAVALSLGMHWVSNFFIGLYFLSVVNKFGISTVYLGF ASVCALAVVYIAGNVVETKGRSLEEIERALSSAS</aaseq>

Gene Sequence

<dnaseqindica>1..247#1321..1432#1579..1646#1903..2035#2142..2241#2348..2460#2833..2926#3011..3164#3335..3481#3557..3630#3723..3811#3899..4013#4307..4489#ggcgggcagcagcagcacgtcgtcgtcgctgcgcgcggtgatcggaagtcgccggcgatcgcggcgccaccaccagcgaccgtgcggatgccgggccgcgtgctctgctgcggcatgaggtcgcgcggggcggatctcgccggcgtcgagatggcggcggggccgcagccgcagggcggcgtctcggggctcttccgcggcccgcgctcgagcccgcgctactcccgcgtgcgcgccaccgccacaggtgcgtcctccctcgtcaccgattgattgggggtggcagtgagcttttggttgttgggatggcgtggtagggtgattcggttttaggagagaggatcaatggggcactgtaactaccggtagattctgtgcaagagggcgtgtttttgcagggattattgtggatttggtcaaggatgttgtgttccatacactgtttttgtgaattacatcaggtgttgatggaaattagatagcattttgtatgatcgtgcttggtggttattgctggctgcagacttgtcatacttattgttacatttagcttgccaaaacatcttaatatatatgagtgtgatgtggtccttgttacattatttgagccaaaatgtaagtagtggtgaggaactggctcatttttaccctcgcattatgtacttcaactggctcctttttaccctcgcagtatgtatttcagaggtgattagctgtaccagatgaccatgatgatagtgtatagttctgtgactattttgtctagtgttcagcttctctttttggggttatcaattgggtttgttgctaactagcttggcctttgaataatttattcagtgtaaagttgtgttatatttggtgcttgactgttcaaagtgcaggaattgcgaacatatgttgtcatataaccccaacatataactgtgcatcaagatatttgtaggagtgtctcaaactagcatttttcctataatacttaacacagacagtgacatcagagttgtttgttttgtcctttcgtgacattttcatgttagtactatgtttgagcttcaatcgcaagggagtatagagaaaatgccaaaaaaagaggggggaagtgattaaagaaaaagtgagcaggagttttgctagatgcaattttttttaatgctctacattttttttgaaacctctatattagcattatctatgatgcatgttgtataattgtgggcttatagtgctcatgcgctcatgcttagttttgcaagccaaaactggaatgtagtttaactatatctgctgatcttgatttctaatactatttatttccagttgatcctgaggatattccattggagaaggttcaagctaaatcttctggaagtgttctgccatatgtgggcgttgcttgtttgggggctattttatttggttatcatcttgggtatgtattgtgttgctgtttccaatttgtcataattgcatagattttctgtcaccacccacacattccttgtaacctgaatttaaattgatgaataacaatacctggtaaatctgaatatctcattttgaatttgtgttctgcagagtggtcaacggcgctcttgaatatcttgcaaaggaccttggaatttctgagaatgctgtgttacaaggtgggacatccatttacttggtctataaaatccatgctttatttttagtatatattccttctttggtctctgtaaaaggcacatctcaaattttagatcaattactcacaaaccgttgccaaggattatctaaatattatttttgaaggaggaaaggtctaagaaaaacagctaaatcaaacatagaaagttgatagtatgattctatgagatattcgtttgcaatatttcacaatgcattttgtttgtctcttaggatgggtggttagcacaaccctggctggtgcgacagcaggttcttttactggaggtgctttagctgacaaatttggacgaacacggacgttcatcctggatgcaatccctctcgctgtaggtgcattcctgaggtgtgtctatagattcgattaattgtgttttaactaggaatgtacacttgcttaagaaaaccgctattgtcatccaacggaaacctaacacatgaaagatttgcagtgcaacagctcatgatgttcgcacaatgattattggccgattacttgctgggattggtattggcatatcttctgctcttgtgcccctttacatatctgaggttgtgataactgataaattcaaattgttgaaatgattgttcagctactactggctaggttcttgaacatgcccaacaactgagctatttacgcttgcgcctgcagatttcacccactgaaatacgtggagcacttggttctgttaatcagctttttatctgcattggaattcttgctgctctggtagctggattacctctggcaggaaaccctgcttggtgagtttttgtcctagttcttttctcctgcttctgcttcatttagtgccttttacattcttatctggttgcacaaacaatcattttggtttatcgtcttcgcaaaccacgattgtactttggagcaatggcatgctagattagaaaggggtaatctgtctctttggttattcatgaacaaagttaaattacatgagaggaggatggaggcaacaaacatgtttttccaacacgtaccgtatagataagtaaaaattcagacatgcataccagaacagcattgtgctgaaaaaagatggcaacaaactttgtatgacatgcaggttgttatattcacattgttttcatatgtatgtgtctgtatgtaataaggtggaggacaatgttcggaatttcaattgttccatccattttgcttgctcttgggatggctgtttcacctgaaagccctcgttggctattccaggtttgtacatggcaaatcccttatctatgtttctacctcaaacttaagcccgacacttactgattcttctgtgattaactgcagcaaggaaaactttctcaggcagaaacagctattaaaaaactatatggaagagaaaaagttgctgaagttatgtatgacctaaaagctgccagccaaggttcttctgagccagatgctggctggttggatcttttcagcaaacgctattggaaaggtagttttgttttctctgtttcagatctgactattttgattcctcaaattgcatcatgaaatcttccctgattgttatttcctactcttgtgttgctaaaataaaaacccaacatttaaccaaaacatcagtttggtgatttgttgctgacatattttttcataccgcagttgttagtgtgggcgcagctatgttcttgttccaacagcttgccggtataaatgctgttgtatattactctacatcggtgttccgcagtgcaggcattgcatctgatgttgcagcgagtgcccttgttggagcagccaatgtttttggttagtccatgcttagaaagtattctagaatcaattttgaaatggcctttctgatggtatatatatttctgataggtacaatgattgcatcttctctgatggacaagcaaggaaggaagagccttctgataacaagcttttctggcatggtataccattatctaggataaaccatgtttttgtctttcacaatattgaaacgaaagtttgcttaaaagttcactgcttctcccttttgaaggctgcctcaatgttacttctatcattgtccttcacgtggaaggctttggcaccttattcaggccctcttgctgttgctggcactgttttgtaagtggtttgtcatacgctttagtcaggccttttgctgattgtcattgttaactgttaatataacttgaatataattttatttaggtatgtgctgtcttttgctcttggagctggcccagttccagcattgctccttcctgaaatatttgcctccagaataagggctaaagctgttgcattatctctgggcatgcactgggtaagttatgcttggtgtgttggatgaagtttgacagatttgtgatgtggttagctataatattagtttaactgcttttctatataattgaaaatattttaatttgtgtgaaagtgaatataaacaataattgtttaaagatcatagatttgcaattaccaaacaaatttctgatgtatataaactcctttcatctagctaaggcgatcatcgttgtaggataagtgcagtgttgttttattgccttacctactgtcaccagtgaatcatcgtctgcttttttttttgggcaggtttcgaacttctttattggcctctacttcttgagcgtcgtcaacaaattcggaatcagcactgtgtatttgggatttgcatctgtttgcgctcttgctgttgtctacatagctggaaatgtggttgagaccaaggggcgttctctggaagagattgagcgggctctaagttcagcaagctgatctgcaactccagcaggtgactggatgggcattcaagaaaacatcctctggctttccgtccagtagatgttcattctagtcttgaaataaacgagtggctacttggcaagtgaacttcttcttcttcttcttcttcttcttgtttttttttttttttgaactggagtggcaagtaaagttggtatctgtgaattggttggagcttcgagggttgtgaattctgacatttgtcagaataaaagaagttcatactgtagcaattagatgccagtatgccaccgcttctagtgtatagaggaacttttcttccatctgttggaaataataaaagcagctcgtcgaatttacagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0133400, RefSeq:Os01g0133400