Os01g0133500

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Revision as of 04:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0133500| Description = Beta-lactamase-like domain containing protein| Version = NM_001048474.1 GI:115434361 GeneID:4325805| Length = 6365 b...")
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Gene Name

Os01g0133500

Description

Beta-lactamase-like domain containing protein

Version

NM_001048474.1 GI:115434361 GeneID:4325805

Length

6365 bp

Definition

Oryza sativa Japonica Group Os01g0133500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1848887..1855251

Sequence Coding Region

1848970..1849251,1849419..1849566,1849638..1849789,1850146..1850328,1850690..1850765
,1850956..1851033,1851584..1851669,1852680..1852753,1852920..1852965
,1853211..1853320,1853600..1853774,1854579..1854749

Expression

GEO Profiles:Os01g0133500

Genome Context

<gbrowseImage1> name=NC_008394:1848887..1855251 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1848887..1855251 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctccccctcctaccgtctcgcggcggcgatcacgatcccttccaccgacgagttcctcctcgtccgccagccgccgccgccgtccccagcgcccgcaccggaggaggaggaatacctataccggggctacgtcgacagcgagctctacgacctcccgtcggcacccctgcggcccctggcgggtgagctccggtcggatgtggccatccgcggcgcggactccgtcgccggccggctcgacatctcgcgcctcgacgtgtccgcctccctcgaccagatttgcgatcaattcggtttgccgagtggaatttgcggggagtggaggctcctgaagtatgtggaggaagcggagtttggcccagatgctgggctcaacacggtgctcatcatcggttcattggagtcaaaactggaggcgttgcaagactcctggaggtggatgtccaaggaatgtgcttcgggattgctctctggagcaaagtccggtggtactcgcatagggccctatgcgtatattggacttctgaagccagagctgccatcaaactggacagttgcccctgcattgccttgccaggagtaccctcctggaataaaacttgtgccgatgaagagtaacacattacagcccttccgtacaactaatcttgtggtagtagtagcaaccgatactcctggtggatcaacatgttctgattgtgttgtttatggggatgctctactaatagatcctggatgctgctcacaagttcatggaaagcttgcagaacttgttaattcccttccaaagaagttagtggtccttgttacacatcatcatcatgatcatgttgatggtctctctgttgttcagagatgcaaccctgatgctgttcttttgacacacaaaaatacaatgagtcgcattgggaaaggaaattggtcaattggctatactgcagtagctgggggagaaaatatatgcataggtgaccaacaactgcaagttgtttttgctcctggtcatacagatggtcacatgggggttttacatgttaataccaatgcattaattgttggagatcactgtgtagggcaaggaagtgcaacattggacaatagagctggtggcaacatgaaggactactttcaaactacatacaatttcttggacatgtcaccgcacgtgctgattccaatgcatggaagaatcaacctatggcccaaacatatgctttgtggatacctcaggcaccgaagggcaagggaagtgtccattctacagtctatagagaatggggctcggactctgtttgacatagtttcaaaaacttatgctgatgtagataggaaattatggattcctgcttctttcaatgttcgccttcatgttgatcatctgaactcccaaaataaactacctaagagcttttcgatggacaagtttgaagtgagctgtggaacaaacttcatgctgtggtgggcggtggcgtatgtgcaagccaggagctcaccagctatccttgcggcaactgcccttgccggtggtttggcaattgcttacgctctcaaaaggaacagcggcaacgaaccgtaa</cdnaseq>

Protein Sequence

<aaseq>MGSPSYRLAAAITIPSTDEFLLVRQPPPPSPAPAPEEEEYLYRG YVDSELYDLPSAPLRPLAGELRSDVAIRGADSVAGRLDISRLDVSASLDQICDQFGLP SGICGEWRLLKYVEEAEFGPDAGLNTVLIIGSLESKLEALQDSWRWMSKECASGLLSG AKSGGTRIGPYAYIGLLKPELPSNWTVAPALPCQEYPPGIKLVPMKSNTLQPFRTTNL VVVVATDTPGGSTCSDCVVYGDALLIDPGCCSQVHGKLAELVNSLPKKLVVLVTHHHH DHVDGLSVVQRCNPDAVLLTHKNTMSRIGKGNWSIGYTAVAGGENICIGDQQLQVVFA PGHTDGHMGVLHVNTNALIVGDHCVGQGSATLDNRAGGNMKDYFQTTYNFLDMSPHVL IPMHGRINLWPKHMLCGYLRHRRAREVSILQSIENGARTLFDIVSKTYADVDRKLWIP ASFNVRLHVDHLNSQNKLPKSFSMDKFEVSCGTNFMLWWAVAYVQARSSPAILAATAL AGGLAIAYALKRNSGNEP</aaseq>

Gene Sequence

<dnaseqindica>84..365#533..680#752..903#1260..1442#1804..1879#2070..2147#2698..2783#3794..3867#4034..4079#4325..4434#4714..4888#5693..5863#agctacccgcctggcgcctagtgccctggccagtatacagcgaggacatcgtcacctcgcagcgccacaacgccggggcggagatgggctccccctcctaccgtctcgcggcggcgatcacgatcccttccaccgacgagttcctcctcgtccgccagccgccgccgccgtccccagcgcccgcaccggaggaggaggaatacctataccggggctacgtcgacagcgagctctacgacctcccgtcggcacccctgcggcccctggcgggtgagctccggtcggatgtggccatccgcggcgcggactccgtcgccggccggctcgacatctcgcgcctcgacgtgtccgcctccctcgaccaggtgaagcttctccgctgctgcagttctgcatacacttaggtgttgcttacgagaattgccctcaattcgactggtagttttggggaaattgctgcttacttgtgctaggctgctagcatcagtttggcgaacctaataactcttctagacgatggatttctcactagatttgcgatcaattcggtttgccgagtggaatttgcggggagtggaggctcctgaagtatgtggaggaagcggagtttggcccagatgctgggctcaacacggtgctcatcatcggttcattggagtcaaaactggaggcgttgcaaggtcaaattcctaggttctcagacttcgtgcatatagcatttcgcttaaccatcctatattgctcgatgcagactcctggaggtggatgtccaaggaatgtgcttcgggattgctctctggagcaaagtccggtggtactcgcatagggccctatgcgtatattggacttctgaagccagagctgccatcaaactggacagttgcccctgcattgccttgccaggtctctacatttttcacttgcataaaaataaagctagtatatacttcctccgtttcatattataagatgtttaactttttttcaagttgaacttgtgtaagtttgaccaagtttatagaaaaaacattgcaatattttcgacactaaacaaaaatactatcaaaaatatattcaatgctagatttgatgaaacaaatttggtatcgtaagagttgctacattttcctgtgaacttagtcaaacttagaaaaatgtcaaagcgttttataatatgaaacggagggagtactagattactatcatgccactatgccagattgtctccttttcctttcctgaaatgcataatttgttaggagtaccctcctggaataaaacttgtgccgatgaagagtaacacattacagcccttccgtacaactaatcttgtggtagtagtagcaaccgatactcctggtggatcaacatgttctgattgtgttgtttatggggatgctctactaatagatcctggatgctgctcacaagttcatggaaaggtattaacttattctccaaatcgtatcataatgtagtgctatagagttccatggaaatcctattatcttattcatacattttttatcttcatcatatgtggctttttctggaaggcctctgaacttacctacaaaacagctacatgaatagtatttatctactactattacaatagaattagcagggtctaccataaactgactctaggggacaaaaccatctcaagacttctttttagaattttacttatgcaaaagtgtgcttattttatatgctagttcatacagtagctatgtgtttacatggatttgttcctctattcgtatgaatgactacatctttaattcttaccatgttcagcttgcagaacttgttaattcccttccaaagaagttagtggtccttgttacacatcatcatcatgatcatgttgatggtatggttacaaatgttctttccagcacttcttcaattgctatatgctcttacctagtgattgagatttcatcttggaagattgaaacatgtgttgcactatagtagttgtttttgggttaattactaccataccgatttgttcatcaaggaccagcacaagcgctgactgcatttccttaaatatgcaggtctctctgttgttcagagatgcaaccctgatgctgttcttttgacacacaaaaatacaatgagtcgcattgggaaaggtaatgttcttttcttggcaatgtaaagcttatcatccacttgggcaaaacatatctatcttcccttttttaagaagcacttgaatcagttgggcaaatgtatacttagcaagtcaagtttcaaatcaagtaaaagaaaactgtgacctcagctaaaattgaccttcgggatcacctctgctagatctccttatatcctgtttgaatagtgggaaaatttcgagaaactcctaatctgcaacttgcatcaaatccttcaaaagatatggtcccaaagtttccaagaaaaaaaggaccaatgcatttaacatagaatcttacgctcagatatctttgaccagaatctctagattagtagttcattttagttctggttgttttacactattaatttaatttggactataactgtcgtttattaccttcaactgctttacaccaagcacattaaattcctaaatttccttgtattttaaaatatatcattatttgtatgtatcatttcagaattgcccacacccaccttactattttatccgcaactgttcaggaaattggtcaattggctatactgcagtagctgggggagaaaatatatgcataggtgaccaacaactgcaagttgtttttgctcctgtaagactgtctttccctaggaagatttggtagaaagtttctgaaaattttattttatttgctgtatcaagctctatttaatgaaaggacaactctaggaaaggttcttagtagcagtccagaataatacatctataatgcttgttgcttggtggctacaaaacattgtttcttctagttcaaatgtagatacatgataaatagtccatgctgatgtttgtggtagttcaaatttatgtccaccgatatttgtgatgattgcttgaataaacagcagtggtgatacctggagctaaaaacagcacttttaaatggaaatacataatgtagccttcccgactttattcagaggcaaaccagcagcaacactgtggcatgaccacgacctgtatactgtctagaaaatactttctaggaaatctttaatctcatgctgcaattgtaggtctttctttgaaacaggctacttcctccattttatattataagactttctagcattgcccgtattcatatatatgttaatgaatctagacatatatgtgtgtctagattcattaacatctatatgaatgtaggcaatgctagaaagtcttataacctaaaacggaggtagtatatttctgctagttgtgtcaaatcttccatgtaaagtcatgatagccaaaacatgtcactggtatatttcaattttttttctgtgtccactcatttcctgttatgatcttaagggcagtgcttgtctgatgttctatgccatatactgagcgaaaactatttagttatgtcaaataaaagtgcagcaactacatctgtgaattctgtttaccttttttttttttaaaaaaagtagggagacatgttggtcaaatttagaaaaactctatttggagaaatatagaaaatatttatcccatcataaataggacaaaggtgcatcctgtgtaattttagtttcgttatattctttctttagtcccatttaatttttcttcctttctgtatcttagggtcatacagatggtcacatgggggttttacatgttaataccaatgcattaattgttggagatcactgtgtagggtaagtattcttcaacatattactggtagcttatcacttgtcaggtacttcatgaccttatgttatataagttatctgcaattatgggatcacactagtgttaaactgttagcataatggtactatgttggcatatctgcaattaagttagttttactcttatcaggcaaggaagtgcaacattggacaatagagctggtggcaacatgaaggtaattgtcattccttttgtttaaaaggccacatagtattgctcatcaagactctgaagctcacatggagatttctcgtttttggggctatacctttttatgcgtatttcctcctttcctcttgtatttcagtctttaacaagttttattcttgttcatatgtccagaacaatgttgtctcacctgagttccattagcacaagtttgttctgagttctgtgacttctgagttctgacatatgcaggactactttcaaactacatacaatttcttggacatgtcaccgcacgtgctgattccaatgcatggaagaatcaacctatggcccaaacatatgctttgtggatacctcaggtatgatactaattacctctgtagacttcatctatagattacaattattaatctgagaaggtggaatctgtacctcaggattttgtttcttgtcacaatttcctgttccgaaaaaaacatcttactaccatttgtttgcatttatgcggtcccatctcaagaccatagatgccaacatgtgactaaactatacttgtttttgttcctatatatgatttgccccttgtttggggcactgaagacattgatgatgctgatttagtgtgttttacttttcaggcaccgaagggcaagggaagtgtccattctacagtctatagagaatggggctcggactctgtttgacatagtttcaaaaacttatgctgatgtagataggaaattatggattcctgcttctttcaatgttcgccttcatgttgatcatctgaactcccaaaataaactacctaaggtgagagtttttttgaatcattttgagagtatactccatttgaacttaatagaacctaaaggacatattatatgtctgagtgatatgttctctttagtattgtagacatttacataaactatcttggtgtattgaagtactgtgggatgaatatcaaccaaatagcaaatcagtatatatataatagatgatttggtttgaatgattgggctgtgggaagctagtttgatgtcttgggcatatgataaatgacataatgacaggacgatacttcttgttatgacattcttgtgtaggttggggaactacaatcatattagaaccaattattcattatagtgaagatttagtttaatataagtttcttggggatcatcttgcaggatttctccttacaaatgttcaaccgaagttgtgatgaattcgttcctagcctatcatgagttatgtccatgagtgggaaaaggcccatcaaatgctgctttgagtttggattcagtttaggtgtgattgtgatgttttagcatgaagttaagcagcagtcatggggtactcataattgattcgaccaaactccaaacattgtaatttatcagatatgtgtattaaaagcccttgccaatctgcaatgcttggaatttttccatctgatgctcaaactgaacgcaagtgaaatccttctcgccagatgatttatcattacgtctggcctttatatatttgtagatttgttataccaaggtaacactttctattgcttcatatgatatttctcagattatcggcctcatttactgtatgcagagcttttcgatggacaagtttgaagtgagctgtggaacaaacttcatgctgtggtgggcggtggcgtatgtgcaagccaggagctcaccagctatccttgcggcaactgcccttgccggtggtttggcaattgcttacgctctcaaaaggaacagcggcaacgaaccgtaaggattctccgatacggtaatgtccatctgcgttaaccctttttttttccctaagcttatgtctccggtatgcggggccaacttgcaacttccataattgttactatagggattccattcgtgaacttttcctcgtctatacacaagagcgggggtccaaaataagtagcttgagtcaacgcatgatactggtgcaaaattaggacgtaataagttctttgttcttgcaactcacgctttcgcatagagtgatgatgtctaacctttgcgcaattgctcttgcagacttcaaagcacgaagtatctattttaatgcagaaaggaagcttttctcaaaataaaataaaataaagtttgatcttataattaattttagagtttctttgccactttcaatagggatgagaagttgtctttttcctttttcatggagggagtactccatactgtacactacagtgctacccatttcattgaatatattgacccggattctgatcctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0133500, RefSeq:Os01g0133500