Os01g0133900

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Revision as of 04:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0133900| Description = Protein kinase-like domain containing protein| Version = NM_001048476.2 GI:297596041 GeneID:4325808| Length = 2493 b...")
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Gene Name

Os01g0133900

Description

Protein kinase-like domain containing protein

Version

NM_001048476.2 GI:297596041 GeneID:4325808

Length

2493 bp

Definition

Oryza sativa Japonica Group Os01g0133900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1866989..1869481

Sequence Coding Region

1866989..1868393,1868465..1869149,1869454..1869481

Expression

GEO Profiles:Os01g0133900

Genome Context

<gbrowseImage1> name=NC_008394:1866989..1869481 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1866989..1869481 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctcgcaacagcggcggcggcgccagcgccattctgctgccgctcttcttgtcggcactgctgcttcgatgcttcgtgtgttatgccgacggcggcggcggcggctcgctggacgccgacgtcgcggcgctgtcggacttccggctggccgccgaccggtcaggcgcgctggcgagctgggacctggcagccaacccagcgccgtgcgggacgtggcggggtgtcagctgcgcgggtgggcgggtgacgaggctggtgctcgagggtttcggcctgtccggcgacgccgcgctcccggcgctcgcgaggcttgacggcctccgcgtgcttagtctcaaggggaacggcctcaccggcgccattcccgacctctcgccgctcgcggggctcaagctgctgttcctcgccggcaactcgctgtccggcccgataccgccgtcgattggggcgctgtaccggctgtatcgcctcgacctgtcgttcaacaacttgtccggcgtcgtgccaccggagctcaaccggctcgacaggttgctcacgctgcggctggactccaaccggctcagcggcgggattgacggcattgcgctccctgtgctgcaagacttcaatgtctccaacaatcttttgacggggaggattccggtggcgatggccaagtttccggttggggcgttcggcgggaatgctggtctctgcagcgcgccgctgccgccgtgcaaggacgaggcgcagcagccgaacgcgtcggcggctgtcaacgcgtccgcgacgccgccgtgcccaccggctgcggccatggtggcgtcgtcgccgtcagcgaagccagcgggcgcggcaaccagcggcaagggaaagatgagctgcgcggccgtggtggcaattgtggccggggacttcgccgtggtcgggctcgtggccgggctgctgttctgctacttctggccacgcctctccggccggcgaagcgccaggcgtctccgggaaggggagaagatcgtgtactcctccagcccctatggcgccaccggagtggtcactgcagctggcggcacgtttgagcgggggaaaatggtgtttctggaggacgtcagcagcggcggcgggaagcggtttgagctcgacgacctgctgcgcgcatcagcagagatgctcggcaagggcgggtgcggcacggcgtacaaggccgtgcttggcgacggcagcgtcgtggccgtcaagcggctgcgcgacgccacggcggcggcggcgtccaagaaggatttcgagcaccacatggccgtgcttggccgtctccgtcacccgaacatcgtgccactcaacgcctactactacgcccgcgacgagaagctgctcgtctacgagttcatgcccaacggcagcctcttctccctcctgcacggtaaccgtggccctgggcgcacgccgctggactgggcggcgcggatgcgcatcgcctccgccgccgcgcgcggcctagcatacatccaccacgcgagccgccggggcagcgggacgccgaggctggcgcacggcaacatcaagagcacgaacatactgctcgacaaagccggcgtggggcggctcgcggactgcggcctggcgcagctgggctcgtccccggcggccgccgcggcgcgctcggcggggtaccgcgcccccgaggcgcccccgccgccgcggccgtgggcgtcgcagaagggcgacgtgtacgcgttcggcgtggtgctactcgagctgctgacggggcggtgcccgggcagcgagcttcccaacggcggcgtggtggtggagctgccgcggtgggtgcagtcggtggtgagggaggagtggacgtcggaggtgttcgacctggagctgatgaaggacaagggcatcgaggaggagatggtggcgatgctgcagctcgccctgagctgcgcgtcggcggcgcccgaccagcggccgaagatcgggtacgtggtgaagatgatcgaggagatccgcgcgtgcggggaggcgtcgccgtcgcacgagtcgatggacgagtcctccggcgtgtccgtgtccgactcgcccgccgtgtcagaaggtggcgccattagccacagcagcattgctctgatgcatgactga</cdnaseq>

Protein Sequence

<aaseq>MPRNSGGGASAILLPLFLSALLLRCFVCYADGGGGGSLDADVAA LSDFRLAADRSGALASWDLAANPAPCGTWRGVSCAGGRVTRLVLEGFGLSGDAALPAL ARLDGLRVLSLKGNGLTGAIPDLSPLAGLKLLFLAGNSLSGPIPPSIGALYRLYRLDL SFNNLSGVVPPELNRLDRLLTLRLDSNRLSGGIDGIALPVLQDFNVSNNLLTGRIPVA MAKFPVGAFGGNAGLCSAPLPPCKDEAQQPNASAAVNASATPPCPPAAAMVASSPSAK PAGAATSGKGKMSCAAVVAIVAGDFAVVGLVAGLLFCYFWPRLSGRRSARRLREGEKI VYSSSPYGATGVVTAAGGTFERGKMVFLEDVSSGGGKRFELDDLLRASAEMLGKGGCG TAYKAVLGDGSVVAVKRLRDATAAAASKKDFEHHMAVLGRLRHPNIVPLNAYYYARDE KLLVYEFMPNGSLFSLLHGNRGPGRTPLDWAARMRIASAAARGLAYIHHASRRGSGTP RLAHGNIKSTNILLDKAGVGRLADCGLAQLGSSPAAAAARSAGYRAPEAPPPPRPWAS QKGDVYAFGVVLLELLTGRCPGSELPNGGVVVELPRWVQSVVREEWTSEVFDLELMKD KGIEEEMVAMLQLALSCASAAPDQRPKIGYVVKMIEEIRACGEASPSHESMDESSGVS VSDSPAVSEGGAISHSSIALMHD</aaseq>

Gene Sequence

<dnaseqindica>1..1405#1477..2161#2466..2493#atgcctcgcaacagcggcggcggcgccagcgccattctgctgccgctcttcttgtcggcactgctgcttcgatgcttcgtgtgttatgccgacggcggcggcggcggctcgctggacgccgacgtcgcggcgctgtcggacttccggctggccgccgaccggtcaggcgcgctggcgagctgggacctggcagccaacccagcgccgtgcgggacgtggcggggtgtcagctgcgcgggtgggcgggtgacgaggctggtgctcgagggtttcggcctgtccggcgacgccgcgctcccggcgctcgcgaggcttgacggcctccgcgtgcttagtctcaaggggaacggcctcaccggcgccattcccgacctctcgccgctcgcggggctcaagctgctgttcctcgccggcaactcgctgtccggcccgataccgccgtcgattggggcgctgtaccggctgtatcgcctcgacctgtcgttcaacaacttgtccggcgtcgtgccaccggagctcaaccggctcgacaggttgctcacgctgcggctggactccaaccggctcagcggcgggattgacggcattgcgctccctgtgctgcaagacttcaatgtctccaacaatcttttgacggggaggattccggtggcgatggccaagtttccggttggggcgttcggcgggaatgctggtctctgcagcgcgccgctgccgccgtgcaaggacgaggcgcagcagccgaacgcgtcggcggctgtcaacgcgtccgcgacgccgccgtgcccaccggctgcggccatggtggcgtcgtcgccgtcagcgaagccagcgggcgcggcaaccagcggcaagggaaagatgagctgcgcggccgtggtggcaattgtggccggggacttcgccgtggtcgggctcgtggccgggctgctgttctgctacttctggccacgcctctccggccggcgaagcgccaggcgtctccgggaaggggagaagatcgtgtactcctccagcccctatggcgccaccggagtggtcactgcagctggcggcacgtttgagcgggggaaaatggtgtttctggaggacgtcagcagcggcggcgggaagcggtttgagctcgacgacctgctgcgcgcatcagcagagatgctcggcaagggcgggtgcggcacggcgtacaaggccgtgcttggcgacggcagcgtcgtggccgtcaagcggctgcgcgacgccacggcggcggcggcgtccaagaaggatttcgagcaccacatggccgtgcttggccgtctccgtcacccgaacatcgtgccactcaacgcctactactacgcccgcgacgagaagctgctcgtctacgagttcatgcccaacggcagcctcttctccctcctgcacggtgagttctctaattgttgcatctcgacattgatttcgtcgaacacctgttgctgaaacatgttattataggtaaccgtggccctgggcgcacgccgctggactgggcggcgcggatgcgcatcgcctccgccgccgcgcgcggcctagcatacatccaccacgcgagccgccggggcagcgggacgccgaggctggcgcacggcaacatcaagagcacgaacatactgctcgacaaagccggcgtggggcggctcgcggactgcggcctggcgcagctgggctcgtccccggcggccgccgcggcgcgctcggcggggtaccgcgcccccgaggcgcccccgccgccgcggccgtgggcgtcgcagaagggcgacgtgtacgcgttcggcgtggtgctactcgagctgctgacggggcggtgcccgggcagcgagcttcccaacggcggcgtggtggtggagctgccgcggtgggtgcagtcggtggtgagggaggagtggacgtcggaggtgttcgacctggagctgatgaaggacaagggcatcgaggaggagatggtggcgatgctgcagctcgccctgagctgcgcgtcggcggcgcccgaccagcggccgaagatcgggtacgtggtgaagatgatcgaggagatccgcgcgtgcggggaggcgtcgccgtcgcacgagtcgatggacgagtcctccggcgtgtccgtgtccgactcgcccgccgtgtcagaaggtggcgccattagccagtgattaatttgtctgtgcctttgtgatttgcggtttggtttactttgggattgcttttggtgtgcagccgatctgattagcgtctgctgttggatggtgttaagagttctttctgtacatgcatgattgctctggttctgattcgttttgctgtgttttttagtagcacccgttttagaatgatgaaacttagaatttctgcagagccgttccctgtgaaagaaaaagtcattcttcgaatgaatctttgtctccatttggactttcggtgctagtatatttctttctttttttttctggcagcagcagcattgctctgatgcatgactga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0133900, RefSeq:Os01g0133900