Os01g0135000

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Revision as of 04:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0135000| Description = Similar to 1,4-beta-D xylan xylanohydrolase (Fragment)| Version = NM_001048483.1 GI:115434379 GeneID:4325691| Length...")
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Gene Name

Os01g0135000

Description

Similar to 1,4-beta-D xylan xylanohydrolase (Fragment)

Version

NM_001048483.1 GI:115434379 GeneID:4325691

Length

1587 bp

Definition

Oryza sativa Japonica Group Os01g0135000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1913497..1915083

Sequence Coding Region

1914023..1914283

Expression

GEO Profiles:Os01g0135000

Genome Context

<gbrowseImage1> name=NC_008394:1913497..1915083 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1913497..1915083 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcgtggcagcaggagcaggtgatcgccggagtctggaacgacttgttcgccgtggattggtgatttgcggtggcgagtcacggcgatcggacgagaccgtatataaaggtccgatcggtcggccgtcaaaatcattgcgacatagttctaaagcgtaccgaccgccaaaaatattgtgcaaactcgaagcaaccaccaccacagcgagagacgacgacctctgcttctccttctctctctggctttgctgcgtttga</cdnaseq>

Protein Sequence

<aaseq>MIVAAGAGDRRSLERLVRRGLVICGGESRRSDETVYKGPIGRPS KSLRHSSKAYRPPKILCKLEATTTTARDDDLCFSFSLWLCCV</aaseq>

Gene Sequence

<dnaseqindica>527..787#tgatctccgtccacctgccggcctgggcgcacaccgcgccgccctcgacgacgcactcgtcgtcgtcgtcgaggcggaggttgacgcgcaccgggtggctcccctcggcgccgtcgccgaggctgatccacccggccacgcggtacgtgacgcggggcttgagcgcgccggccaccgcccggcgcagcccgtcctcctcgccggcgcggcccgccgcgaggatgtaccggccgctgggcttgtagtcgtcggccaccgtgttgatggtctcggtcggcaccttctccggctcctcattgtgcacggacagcgccgtgcactcgccgaccgccgcccagccggcgagcccgtcctccagcgtgctgttctcgagcaggttcacgtcgaaaaccaccccctgcaaacaaaaagctcaaccataatcgatcaccgtaaataatgctgcttttgaaaaggagtgagtacatagctggcaaagtgatcaatcaaccaattttgttgattgtgccgtaccttggtgcaggccatgatcgtggcagcaggagcaggtgatcgccggagtctggaacgacttgttcgccgtggattggtgatttgcggtggcgagtcacggcgatcggacgagaccgtatataaaggtccgatcggtcggccgtcaaaatcattgcgacatagttctaaagcgtaccgaccgccaaaaatattgtgcaaactcgaagcaaccaccaccacagcgagagacgacgacctctgcttctccttctctctctggctttgctgcgtttgagtaacagtaaagcttgggcaagcaaggctgcaattgcatgcgtggccgtctcgttgggtccagggagctgtgtgactggcaaagtgggacccacatgagacgtgccccacatgtcagaggggggtgctttgagataaggtgttctttttagtaagcatcattaccggcacatccaagcatgtgtcaaggccgggtccgtgcttttcttggctttgggaagagacaactaaaagcgatttgtttagtcgccggtaacgccaaacgtggaatcattagggcacaaaccaatcggagattagattcgacatggactttttctgtccacgataatctctcgtttttttagcactgttcgttaggaggactgaactcgtcatgtactgctaatctcatcatgctactgtgtttgctaattaatttaccggtaattaagcagagggcgcctagagctagccggaattgagaacttgggataagaggagaggagagtgcgacggcggcgtatccaagttgcaggcaggcagccgccccacgacatgactacgacgacgacgacgacgataatggaggatcaattaggcgtagggagtggaagtacgaagcttcaagacacaaacatcggctactaaaacgtgaggtttggtgacggatcgtgtggctgtcaatccaatgaaggaactttgtacttcatagccgcaggtccatatgaacatggatccttctcgaatctttgtttgaatcgatcgcatgatactctctttgctacgaaaatacgcaatggaaatgtacatgtttacaac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0135000, RefSeq:Os01g0135000